MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-3-g8a2ec577e107) initialized Starting run at 05:37:00 UTC on 2022-04-04. Successfully read inputs file ... Castro git describe: 22.04 AMReX git describe: 22.04-3-g8a2ec577e Microphysics git describe: 22.04 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013022326 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337880622 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.348925708 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.377472964 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314777605 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314358621 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33237744 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296268425 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291341802 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292234746 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290108584 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009489585 seconds Ending run at 05:37:04 UTC on 2022-04-04. Run time = 3.393476803 Run time without initialization = 3.209161669 Average number of zones advanced per microsecond: 0.817 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.393 ... 3.393 ... 3.394 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1353 2.1842 2.2421 66.07% Gravity::make_radial_gravity() 21 0.3377 0.3464 0.3562 10.50% MultiFab::min() 10 0.06088 0.1204 0.1715 5.05% Castro::initData() 1 0.03879 0.08 0.1253 3.69% Castro::estTimeStep() 21 0.02283 0.0661 0.1082 3.19% FabArray::setVal() 143 0.06977 0.07404 0.07946 2.34% FabArray::ParallelCopy_finish() 41 0.03291 0.04485 0.05989 1.76% Castro::reset_internal_energy() 63 0.04816 0.04958 0.05071 1.49% StateData::FillBoundary(geom) 41 0.03806 0.04197 0.04498 1.33% Castro::normalize_species() 62 0.04269 0.04357 0.04425 1.30% FabArray::ParallelCopy_nowait() 41 0.03883 0.04154 0.04329 1.28% FillPatchIterator::Initialize 41 0.02373 0.03119 0.03456 1.02% Gravity::interpolate_monopole_grav() 21 0.02739 0.02814 0.0295 0.87% Castro::construct_new_gravity_source() 10 0.02296 0.02403 0.02528 0.74% Castro::do_advance_ctu() 10 0.01787 0.02013 0.02173 0.64% Castro::expand_state() 10 0.0138 0.01873 0.0211 0.62% Castro::computeTemp() 63 0.01843 0.0187 0.01942 0.57% Castro::initialize_do_advance() 10 0.01089 0.01639 0.01784 0.53% MultiFab::Saxpy() 20 0.01518 0.0161 0.01772 0.52% VisMF::Write(FabArray) 2 0.01169 0.01217 0.01426 0.42% Castro::initialize_advance() 10 0.01079 0.0124 0.01416 0.42% Castro::construct_old_gravity_source() 10 0.008487 0.01152 0.01312 0.39% Gravity::get_new_grav_vector() 11 0.01097 0.01158 0.01295 0.38% MultiFab::contains_nan() 20 0.01129 0.01194 0.01293 0.38% FabArray::setDomainBndry() 41 0.007719 0.01047 0.01181 0.35% Gravity::get_old_grav_vector() 10 0.008898 0.00964 0.01102 0.32% Amr::writePlotFile() 2 0.008477 0.01051 0.01098 0.32% Amr::defBaseLevel() 1 0.00687 0.007772 0.009664 0.28% Castro::construct_new_source() 50 0.006532 0.006654 0.006807 0.20% Castro::enforce_min_density() 62 0.005815 0.006108 0.006408 0.19% StateData::define() 4 0.004455 0.00513 0.006371 0.19% Castro::swap_state_time_levels() 10 0.003022 0.003868 0.004039 0.12% main() 1 0.003255 0.00357 0.003947 0.12% Castro::finalize_do_advance() 10 0.0007921 0.0009864 0.001075 0.03% Amr::coarseTimeStep() 10 0.0003712 0.000695 0.001033 0.03% Amr::timeStep() 10 0.0001587 0.0002215 0.0004966 0.01% Amr::InitAmr() 1 0.000284 0.0003494 0.0004441 0.01% DistributionMapping::LeastUsedCPUs() 1 6.907e-06 0.0001266 0.0002224 0.01% Castro::clean_state() 62 0.0001247 0.0001448 0.0001715 0.01% StateDataPhysBCFunct::() 41 0.0001107 0.0001328 0.0001534 0.00% Castro::enforce_consistent_e() 1 8.161e-05 9.259e-05 0.0001059 0.00% Amr::FinalizeInit() 1 3.821e-06 1.622e-05 9.793e-05 0.00% Castro::construct_old_source() 50 6.365e-05 7.805e-05 9.355e-05 0.00% FabArray::ParallelCopy() 41 6.712e-05 7.412e-05 9.008e-05 0.00% FillPatchSingleLevel 41 6.236e-05 6.98e-05 8.462e-05 0.00% Castro::subcycle_advance_ctu() 10 4.043e-05 6.057e-05 7.941e-05 0.00% FabArrayBase::getCPC() 41 4.924e-05 5.877e-05 7.756e-05 0.00% Castro::do_new_sources() 10 5.707e-05 6.529e-05 7.119e-05 0.00% Castro::do_old_sources() 10 5.846e-05 6.429e-05 7.012e-05 0.00% Amr::writeSmallPlotFile() 1 3.165e-05 5.844e-05 6.905e-05 0.00% Castro::construct_old_gravity() 10 5.573e-05 6.028e-05 6.471e-05 0.00% Castro::apply_source_to_state() 20 4.279e-05 5.418e-05 6.322e-05 0.00% Castro::construct_new_gravity() 10 4.106e-05 5.194e-05 6.115e-05 0.00% Castro::finalize_advance() 10 5.046e-05 5.526e-05 5.884e-05 0.00% Castro::advance() 10 3.616e-05 4.048e-05 4.573e-05 0.00% FabArrayBase::CPC::define() 2 2.473e-05 2.862e-05 4.184e-05 0.00% Castro::enforce_speed_limit() 62 2.825e-05 3.305e-05 3.929e-05 0.00% Castro::check_for_nan() 20 2.523e-05 2.766e-05 3.269e-05 0.00% AmrLevel::AmrLevel(dm) 1 2.181e-05 2.653e-05 2.989e-05 0.00% Gravity::swapTimeLevels() 10 1.071e-05 1.458e-05 2.112e-05 0.00% Castro::create_source_corrector() 10 1.505e-05 1.733e-05 2.059e-05 0.00% Amr::initSubcycle() 1 9.963e-06 1.222e-05 1.54e-05 0.00% Castro::post_timestep() 10 8.694e-06 9.509e-06 1.12e-05 0.00% Castro::post_init() 1 3.356e-06 5.482e-06 1.112e-05 0.00% Gravity::set_mass_offset() 10 6.703e-06 8.188e-06 9.371e-06 0.00% Castro::computeNewDt() 9 7.092e-06 7.806e-06 8.724e-06 0.00% Castro::FluxRegFineAdd() 10 6.189e-06 6.91e-06 8.334e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.041e-06 5.496e-06 7.557e-06 0.00% Castro::retry_advance_ctu() 10 5.394e-06 6.317e-06 7.343e-06 0.00% Amr::InitializeInit() 1 2.337e-06 4.163e-06 7.025e-06 0.00% Amr::init() 1 1.959e-06 2.594e-06 5.104e-06 0.00% Castro::computeInitialDt() 2 3.137e-06 3.84e-06 4.384e-06 0.00% Castro::post_regrid() 1 1.969e-06 3.405e-06 4.361e-06 0.00% Amr::initialInit() 1 1.464e-06 1.79e-06 2.261e-06 0.00% DistributionMapping::Distribute() 1 9.05e-07 1.205e-06 1.574e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.393 3.393 3.394 100.00% Amr::coarseTimeStep() 10 3.196 3.196 3.196 94.17% Amr::timeStep() 10 3.186 3.187 3.187 93.92% Castro::advance() 10 3.171 3.171 3.171 93.44% Castro::subcycle_advance_ctu() 10 3.093 3.095 3.096 91.23% Castro::do_advance_ctu() 10 3.093 3.095 3.096 91.23% Castro::construct_ctu_hydro_source() 10 2.135 2.184 2.242 66.07% Gravity::make_radial_gravity() 21 0.3377 0.3464 0.3562 10.50% Gravity::get_new_grav_vector() 11 0.2209 0.2234 0.2249 6.63% Castro::construct_old_gravity() 10 0.2059 0.2125 0.2201 6.48% Gravity::get_old_grav_vector() 10 0.205 0.2117 0.2192 6.46% Castro::construct_new_gravity() 10 0.1988 0.2001 0.2011 5.93% Amr::init() 1 0.1837 0.1838 0.1839 5.42% FillPatchIterator::Initialize 41 0.1594 0.1704 0.181 5.33% MultiFab::min() 10 0.06088 0.1204 0.1715 5.05% Amr::initialInit() 1 0.1705 0.1707 0.1709 5.04% Castro::initialize_do_advance() 10 0.1465 0.1566 0.1638 4.83% Amr::InitializeInit() 1 0.05961 0.09892 0.1441 4.25% Amr::defBaseLevel() 1 0.0596 0.09891 0.1441 4.24% FillPatchSingleLevel 41 0.1167 0.1287 0.1372 4.04% Castro::initData() 1 0.0424 0.08386 0.1289 3.80% Castro::clean_state() 62 0.1145 0.1172 0.119 3.51% Castro::expand_state() 10 0.09999 0.1091 0.1154 3.40% Amr::FinalizeInit() 1 0.02681 0.0718 0.1109 3.27% Castro::estTimeStep() 21 0.02283 0.0661 0.1082 3.19% FabArray::ParallelCopy() 41 0.07502 0.08655 0.09893 2.92% Castro::computeInitialDt() 2 0.001608 0.04669 0.08587 2.53% FabArray::setVal() 143 0.06977 0.07404 0.07946 2.34% Castro::initialize_advance() 10 0.07472 0.07597 0.07789 2.30% Castro::computeTemp() 63 0.06667 0.06828 0.06973 2.05% Castro::do_new_sources() 10 0.06201 0.06458 0.06725 1.98% FabArray::ParallelCopy_finish() 41 0.03291 0.04485 0.05989 1.76% Castro::do_old_sources() 10 0.04706 0.05027 0.05488 1.62% Castro::reset_internal_energy() 63 0.04816 0.04958 0.05071 1.49% StateDataPhysBCFunct::() 41 0.0382 0.04211 0.04512 1.33% StateData::FillBoundary(geom) 41 0.03806 0.04197 0.04498 1.33% Castro::normalize_species() 62 0.04269 0.04357 0.04425 1.30% FabArray::ParallelCopy_nowait() 41 0.03895 0.04162 0.04337 1.28% Castro::construct_new_source() 50 0.02953 0.03068 0.032 0.94% Gravity::interpolate_monopole_grav() 21 0.02739 0.02814 0.0295 0.87% Castro::construct_new_gravity_source() 10 0.02296 0.02403 0.02528 0.74% Castro::post_init() 1 0.02429 0.02443 0.02457 0.72% Amr::writePlotFile() 2 0.02256 0.02268 0.02282 0.67% Castro::apply_source_to_state() 20 0.01523 0.01616 0.01778 0.52% MultiFab::Saxpy() 20 0.01518 0.0161 0.01772 0.52% Castro::post_timestep() 10 0.01519 0.01574 0.01611 0.47% VisMF::Write(FabArray) 2 0.01169 0.01217 0.01426 0.42% Castro::construct_old_source() 50 0.008551 0.01159 0.01319 0.39% Castro::construct_old_gravity_source() 10 0.008487 0.01152 0.01312 0.39% Castro::check_for_nan() 20 0.01132 0.01197 0.01296 0.38% MultiFab::contains_nan() 20 0.01129 0.01194 0.01293 0.38% FabArray::setDomainBndry() 41 0.007719 0.01047 0.01181 0.35% Castro::computeNewDt() 9 0.006856 0.007444 0.008154 0.24% Castro::enforce_min_density() 62 0.005815 0.006108 0.006408 0.19% AmrLevel::AmrLevel(dm) 1 0.004485 0.005156 0.0064 0.19% StateData::define() 4 0.004455 0.00513 0.006371 0.19% Castro::swap_state_time_levels() 10 0.003022 0.003868 0.004039 0.12% Castro::post_regrid() 1 0.001533 0.001584 0.001634 0.05% Castro::finalize_do_advance() 10 0.0007921 0.0009864 0.001075 0.03% Amr::InitAmr() 1 0.0002943 0.0003616 0.0004595 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.226e-05 0.0001333 0.0002289 0.01% DistributionMapping::LeastUsedCPUs() 1 6.907e-06 0.0001266 0.0002224 0.01% FabArrayBase::getCPC() 41 7.541e-05 8.739e-05 0.0001194 0.00% Castro::enforce_consistent_e() 1 8.161e-05 9.259e-05 0.0001059 0.00% Amr::writeSmallPlotFile() 1 3.165e-05 5.844e-05 6.905e-05 0.00% Castro::finalize_advance() 10 5.879e-05 6.217e-05 6.559e-05 0.00% FabArrayBase::CPC::define() 2 2.473e-05 2.862e-05 4.184e-05 0.00% Castro::enforce_speed_limit() 62 2.825e-05 3.305e-05 3.929e-05 0.00% Gravity::swapTimeLevels() 10 1.071e-05 1.458e-05 2.112e-05 0.00% Castro::create_source_corrector() 10 1.505e-05 1.733e-05 2.059e-05 0.00% Amr::initSubcycle() 1 9.963e-06 1.222e-05 1.54e-05 0.00% Gravity::set_mass_offset() 10 6.703e-06 8.188e-06 9.371e-06 0.00% Castro::FluxRegFineAdd() 10 6.189e-06 6.91e-06 8.334e-06 0.00% Castro::retry_advance_ctu() 10 5.394e-06 6.317e-06 7.343e-06 0.00% DistributionMapping::Distribute() 1 9.05e-07 1.205e-06 1.574e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-3-g8a2ec577e107) finalized