MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-6-g917afc0e1896) initialized Starting run at 05:37:03 UTC on 2022-04-05. Successfully read inputs file ... Castro git describe: 22.04-1-gabf8dcbcc AMReX git describe: 22.04-6-g917afc0e1 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012878241 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.338149498 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.335837972 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.314073205 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313752313 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315359494 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341861015 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299380819 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294319608 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294106361 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294026739 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009333334 seconds Ending run at 05:37:07 UTC on 2022-04-05. Run time = 3.338224997 Run time without initialization = 3.153739768 Average number of zones advanced per microsecond: 0.831 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.338 ... 3.338 ... 3.338 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1382 2.1812 2.2447 67.24% Gravity::make_radial_gravity() 21 0.3333 0.3444 0.3626 10.86% Castro::initData() 1 0.03782 0.0806 0.1245 3.73% MultiFab::min() 10 0.01143 0.07772 0.1241 3.72% Castro::estTimeStep() 21 0.01766 0.06696 0.1064 3.19% FabArray::setVal() 143 0.06824 0.07278 0.07755 2.32% FabArray::ParallelCopy_finish() 41 0.03362 0.04148 0.06387 1.91% Castro::reset_internal_energy() 63 0.04834 0.04994 0.0516 1.55% StateData::FillBoundary(geom) 41 0.03953 0.04205 0.04518 1.35% Castro::normalize_species() 62 0.04259 0.04333 0.04413 1.32% FabArray::ParallelCopy_nowait() 41 0.03592 0.04126 0.04311 1.29% FillPatchIterator::Initialize 41 0.02378 0.03119 0.03437 1.03% Gravity::interpolate_monopole_grav() 21 0.02763 0.02789 0.02813 0.84% Castro::construct_new_gravity_source() 10 0.02112 0.02365 0.02589 0.78% Castro::do_advance_ctu() 10 0.01764 0.02031 0.02451 0.73% Castro::expand_state() 10 0.01134 0.01896 0.0217 0.65% Castro::computeTemp() 63 0.01769 0.01882 0.01963 0.59% Castro::initialize_do_advance() 10 0.01067 0.01642 0.019 0.57% MultiFab::Saxpy() 20 0.0139 0.01526 0.01608 0.48% Castro::initialize_advance() 10 0.01074 0.01242 0.01438 0.43% VisMF::Write(FabArray) 2 0.01159 0.01201 0.01401 0.42% Gravity::get_new_grav_vector() 11 0.009664 0.01122 0.01319 0.40% MultiFab::contains_nan() 20 0.01069 0.01139 0.01214 0.36% FabArray::setDomainBndry() 41 0.007039 0.01037 0.0117 0.35% Castro::construct_old_gravity_source() 10 0.007218 0.01099 0.01169 0.35% Amr::writePlotFile() 2 0.00843 0.01051 0.01094 0.33% Gravity::get_old_grav_vector() 10 0.006868 0.009203 0.01059 0.32% Amr::defBaseLevel() 1 0.006742 0.007284 0.007554 0.23% Castro::construct_new_source() 50 0.006064 0.006476 0.006711 0.20% Castro::enforce_min_density() 62 0.005789 0.006166 0.006622 0.20% StateData::define() 4 0.004385 0.004747 0.004883 0.15% Castro::swap_state_time_levels() 10 0.002947 0.003815 0.004226 0.13% main() 1 0.003298 0.003786 0.004065 0.12% Amr::coarseTimeStep() 10 0.0003111 0.0005773 0.001003 0.03% Castro::finalize_do_advance() 10 0.0004594 0.0008194 0.0009632 0.03% Amr::timeStep() 10 0.0001608 0.0002278 0.0004571 0.01% Amr::InitAmr() 1 0.0002816 0.0003119 0.0004038 0.01% Castro::clean_state() 62 0.0001231 0.0001411 0.0001669 0.00% DistributionMapping::LeastUsedCPUs() 1 6.811e-06 0.0001175 0.0001615 0.00% StateDataPhysBCFunct::() 41 0.0001198 0.0001312 0.0001473 0.00% Castro::enforce_consistent_e() 1 7.918e-05 8.774e-05 9.97e-05 0.00% Castro::construct_old_source() 50 6.738e-05 8.387e-05 9.775e-05 0.00% FabArray::ParallelCopy() 41 6.807e-05 7.411e-05 8.079e-05 0.00% FabArrayBase::getCPC() 41 5.004e-05 5.955e-05 7.908e-05 0.00% FillPatchSingleLevel 41 6.03e-05 6.783e-05 7.851e-05 0.00% Amr::FinalizeInit() 1 3.683e-06 1.313e-05 7.28e-05 0.00% Amr::writeSmallPlotFile() 1 2.461e-05 5.235e-05 7.255e-05 0.00% Castro::subcycle_advance_ctu() 10 3.862e-05 5.661e-05 7.24e-05 0.00% Castro::do_old_sources() 10 5.032e-05 6.213e-05 7.167e-05 0.00% Castro::construct_old_gravity() 10 5.617e-05 6.149e-05 6.948e-05 0.00% Castro::do_new_sources() 10 5.568e-05 6.137e-05 6.634e-05 0.00% Castro::apply_source_to_state() 20 4.226e-05 5.262e-05 6.534e-05 0.00% Castro::finalize_advance() 10 4.898e-05 5.341e-05 6.035e-05 0.00% Castro::construct_new_gravity() 10 3.936e-05 5.054e-05 5.937e-05 0.00% Castro::advance() 10 3.905e-05 4.315e-05 5.29e-05 0.00% Castro::enforce_speed_limit() 62 2.586e-05 3.304e-05 3.886e-05 0.00% Gravity::swapTimeLevels() 10 1.408e-05 1.717e-05 3.085e-05 0.00% Castro::check_for_nan() 20 2.193e-05 2.643e-05 3e-05 0.00% FabArrayBase::CPC::define() 2 2.371e-05 2.567e-05 2.895e-05 0.00% Castro::create_source_corrector() 10 1.561e-05 1.8e-05 2.182e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.196e-05 1.451e-05 1.67e-05 0.00% Castro::post_timestep() 10 8.66e-06 9.68e-06 1.089e-05 0.00% Amr::initSubcycle() 1 8.445e-06 9.461e-06 1.018e-05 0.00% Gravity::set_mass_offset() 10 7.356e-06 8.342e-06 9.97e-06 0.00% Castro::computeNewDt() 9 6.571e-06 8.128e-06 9.339e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.222e-06 4.875e-06 7.613e-06 0.00% Castro::FluxRegFineAdd() 10 5.418e-06 6.43e-06 6.803e-06 0.00% Castro::retry_advance_ctu() 10 5.319e-06 5.898e-06 6.19e-06 0.00% Amr::InitializeInit() 1 2.327e-06 2.923e-06 5.834e-06 0.00% Castro::post_init() 1 2.734e-06 4.022e-06 5.367e-06 0.00% Castro::computeInitialDt() 2 2.966e-06 3.747e-06 4.587e-06 0.00% Castro::post_regrid() 1 1.987e-06 2.732e-06 3.804e-06 0.00% Amr::init() 1 1.869e-06 2.38e-06 3.021e-06 0.00% Amr::initialInit() 1 1.03e-06 1.42e-06 1.758e-06 0.00% DistributionMapping::Distribute() 1 9.88e-07 1.08e-06 1.199e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.338 3.338 3.338 100.00% Amr::coarseTimeStep() 10 3.14 3.14 3.14 94.07% Amr::timeStep() 10 3.131 3.132 3.132 93.82% Castro::advance() 10 3.115 3.115 3.115 93.33% Castro::subcycle_advance_ctu() 10 3.036 3.039 3.042 91.11% Castro::do_advance_ctu() 10 3.036 3.039 3.042 91.11% Castro::construct_ctu_hydro_source() 10 2.138 2.181 2.245 67.24% Gravity::make_radial_gravity() 21 0.3333 0.3444 0.3626 10.86% Gravity::get_new_grav_vector() 11 0.2231 0.225 0.2262 6.78% Castro::construct_old_gravity() 10 0.1982 0.2057 0.2214 6.63% Gravity::get_old_grav_vector() 10 0.1973 0.2049 0.2208 6.61% Castro::construct_new_gravity() 10 0.2 0.2013 0.2024 6.06% Amr::init() 1 0.1839 0.184 0.1841 5.51% FillPatchIterator::Initialize 41 0.1586 0.1667 0.1717 5.14% Amr::initialInit() 1 0.1708 0.1709 0.1711 5.12% Castro::initialize_do_advance() 10 0.142 0.1567 0.1624 4.86% Amr::InitializeInit() 1 0.05505 0.09935 0.1439 4.31% Amr::defBaseLevel() 1 0.05504 0.09934 0.1439 4.31% FillPatchSingleLevel 41 0.1202 0.1251 0.1409 4.22% Castro::initData() 1 0.04198 0.08463 0.1284 3.85% MultiFab::min() 10 0.01143 0.07772 0.1241 3.72% Castro::clean_state() 62 0.1142 0.1175 0.1207 3.62% Amr::FinalizeInit() 1 0.02691 0.0716 0.1159 3.47% Castro::expand_state() 10 0.1013 0.1091 0.1136 3.40% Castro::estTimeStep() 21 0.01766 0.06696 0.1064 3.19% FabArray::ParallelCopy() 41 0.07619 0.0829 0.09998 2.99% Castro::computeInitialDt() 2 0.001711 0.0462 0.09055 2.71% Castro::initialize_advance() 10 0.07365 0.07664 0.07963 2.39% FabArray::setVal() 143 0.06824 0.07278 0.07755 2.32% Castro::computeTemp() 63 0.06603 0.06876 0.07123 2.13% Castro::do_new_sources() 10 0.06004 0.06309 0.06774 2.03% FabArray::ParallelCopy_finish() 41 0.03362 0.04148 0.06387 1.91% Castro::reset_internal_energy() 63 0.04834 0.04994 0.0516 1.55% Castro::do_old_sources() 10 0.04255 0.04742 0.0489 1.46% StateDataPhysBCFunct::() 41 0.03968 0.04218 0.0453 1.36% StateData::FillBoundary(geom) 41 0.03953 0.04205 0.04518 1.35% Castro::normalize_species() 62 0.04259 0.04333 0.04413 1.32% FabArray::ParallelCopy_nowait() 41 0.03603 0.04135 0.04319 1.29% Castro::construct_new_source() 50 0.02719 0.03013 0.03258 0.98% Gravity::interpolate_monopole_grav() 21 0.02763 0.02789 0.02813 0.84% Castro::construct_new_gravity_source() 10 0.02112 0.02365 0.02589 0.78% Castro::post_init() 1 0.0245 0.02472 0.0248 0.74% Amr::writePlotFile() 2 0.02244 0.02252 0.02272 0.68% Castro::post_timestep() 10 0.01558 0.01597 0.01632 0.49% Castro::apply_source_to_state() 20 0.01394 0.01531 0.01614 0.48% MultiFab::Saxpy() 20 0.0139 0.01526 0.01608 0.48% VisMF::Write(FabArray) 2 0.01159 0.01201 0.01401 0.42% Castro::check_for_nan() 20 0.01071 0.01142 0.01216 0.36% MultiFab::contains_nan() 20 0.01069 0.01139 0.01214 0.36% Castro::construct_old_source() 50 0.007285 0.01108 0.01178 0.35% FabArray::setDomainBndry() 41 0.007039 0.01037 0.0117 0.35% Castro::construct_old_gravity_source() 10 0.007218 0.01099 0.01169 0.35% Castro::computeNewDt() 9 0.006863 0.007338 0.007925 0.24% Castro::enforce_min_density() 62 0.005789 0.006166 0.006622 0.20% AmrLevel::AmrLevel(dm) 1 0.004397 0.004762 0.004899 0.15% StateData::define() 4 0.004385 0.004747 0.004883 0.15% Castro::swap_state_time_levels() 10 0.002947 0.003815 0.004226 0.13% Castro::post_regrid() 1 0.001547 0.001593 0.001639 0.05% Castro::finalize_do_advance() 10 0.0004594 0.0008194 0.0009632 0.03% Amr::InitAmr() 1 0.0002904 0.0003214 0.0004135 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.234e-05 0.0001234 0.0001676 0.01% DistributionMapping::LeastUsedCPUs() 1 6.811e-06 0.0001175 0.0001615 0.00% FabArrayBase::getCPC() 41 7.491e-05 8.522e-05 0.0001056 0.00% Castro::enforce_consistent_e() 1 7.918e-05 8.774e-05 9.97e-05 0.00% Amr::writeSmallPlotFile() 1 2.461e-05 5.235e-05 7.255e-05 0.00% Castro::finalize_advance() 10 5.574e-05 5.984e-05 6.703e-05 0.00% Castro::enforce_speed_limit() 62 2.586e-05 3.304e-05 3.886e-05 0.00% Gravity::swapTimeLevels() 10 1.408e-05 1.717e-05 3.085e-05 0.00% FabArrayBase::CPC::define() 2 2.371e-05 2.567e-05 2.895e-05 0.00% Castro::create_source_corrector() 10 1.561e-05 1.8e-05 2.182e-05 0.00% Amr::initSubcycle() 1 8.445e-06 9.461e-06 1.018e-05 0.00% Gravity::set_mass_offset() 10 7.356e-06 8.342e-06 9.97e-06 0.00% Castro::FluxRegFineAdd() 10 5.418e-06 6.43e-06 6.803e-06 0.00% Castro::retry_advance_ctu() 10 5.319e-06 5.898e-06 6.19e-06 0.00% DistributionMapping::Distribute() 1 9.88e-07 1.08e-06 1.199e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-6-g917afc0e1896) finalized