MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-7-gec648a92a89f) initialized Starting run at 05:36:54 UTC on 2022-04-06. Successfully read inputs file ... Castro git describe: 22.04-1-gabf8dcbcc AMReX git describe: 22.04-7-gec648a92a Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015701652 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.364760112 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.380452856 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.321907632 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.308976754 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.321777853 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.319580523 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.288510037 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.287878546 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292209744 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.297191095 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009560737 seconds Ending run at 05:36:58 UTC on 2022-04-06. Run time = 3.431790597 Run time without initialization = 3.195497394 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.431 ... 3.432 ... 3.432 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1313 2.1588 2.2077 64.33% Gravity::make_radial_gravity() 21 0.3752 0.386 0.3969 11.57% Castro::initData() 1 0.04771 0.08649 0.1545 4.50% Castro::estTimeStep() 21 0.04214 0.1098 0.1544 4.50% MultiFab::min() 10 0.03004 0.08387 0.1153 3.36% FabArray::setVal() 143 0.06125 0.07151 0.08446 2.46% FabArray::ParallelCopy_finish() 41 0.04818 0.06267 0.07881 2.30% Castro::reset_internal_energy() 63 0.04763 0.04983 0.05257 1.53% StateData::FillBoundary(geom) 41 0.04053 0.04312 0.04739 1.38% Castro::normalize_species() 62 0.04282 0.04445 0.04585 1.34% FabArray::ParallelCopy_nowait() 41 0.03506 0.03978 0.04164 1.21% FillPatchIterator::Initialize 41 0.02416 0.03165 0.03578 1.04% Castro::construct_new_gravity_source() 10 0.0214 0.02483 0.03229 0.94% Gravity::interpolate_monopole_grav() 21 0.02732 0.02825 0.02932 0.85% Castro::do_advance_ctu() 10 0.01562 0.01894 0.02205 0.64% Castro::initialize_do_advance() 10 0.01155 0.01742 0.0202 0.59% Castro::expand_state() 10 0.01233 0.01728 0.01992 0.58% Castro::computeTemp() 63 0.017 0.01846 0.01968 0.57% VisMF::Write(FabArray) 2 0.01144 0.01262 0.01645 0.48% MultiFab::Saxpy() 20 0.01223 0.01378 0.01469 0.43% Amr::writePlotFile() 2 0.009035 0.01292 0.01463 0.43% Castro::initialize_advance() 10 0.009652 0.01162 0.0138 0.40% Gravity::get_new_grav_vector() 11 0.009039 0.01085 0.01212 0.35% MultiFab::contains_nan() 20 0.01012 0.01098 0.01192 0.35% FabArray::setDomainBndry() 41 0.006791 0.009694 0.01116 0.33% Castro::construct_old_gravity_source() 10 0.007398 0.01009 0.01084 0.32% Gravity::get_old_grav_vector() 10 0.007073 0.009 0.01066 0.31% Amr::defBaseLevel() 1 0.006633 0.007768 0.01045 0.30% Castro::construct_new_source() 50 0.005846 0.006382 0.008208 0.24% StateData::define() 4 0.00433 0.005015 0.006467 0.19% Castro::enforce_min_density() 62 0.005785 0.006062 0.006356 0.19% Castro::swap_state_time_levels() 10 0.002793 0.003945 0.005527 0.16% main() 1 0.003482 0.003925 0.0042 0.12% Amr::coarseTimeStep() 10 0.0004261 0.0008647 0.002064 0.06% Castro::finalize_do_advance() 10 0.0004933 0.0008871 0.001054 0.03% Amr::timeStep() 10 0.0001815 0.000243 0.0005237 0.02% Amr::InitAmr() 1 0.0002804 0.0003461 0.0004627 0.01% DistributionMapping::LeastUsedCPUs() 1 1.35e-05 0.0001625 0.0002372 0.01% StateDataPhysBCFunct::() 41 0.0001086 0.0001287 0.0001861 0.01% Castro::clean_state() 62 0.0001171 0.0001284 0.0001482 0.00% Castro::enforce_consistent_e() 1 8.177e-05 9.971e-05 0.0001441 0.00% FabArray::ParallelCopy() 41 6.006e-05 6.932e-05 7.992e-05 0.00% Castro::construct_old_source() 50 5.236e-05 6.564e-05 7.898e-05 0.00% FillPatchSingleLevel 41 5.109e-05 6.397e-05 7.144e-05 0.00% Amr::writeSmallPlotFile() 1 3.528e-05 4.9e-05 7.032e-05 0.00% Amr::FinalizeInit() 1 4.644e-06 1.341e-05 6.772e-05 0.00% Castro::finalize_advance() 10 5.046e-05 5.653e-05 6.743e-05 0.00% Castro::do_new_sources() 10 4.649e-05 5.655e-05 6.722e-05 0.00% Castro::subcycle_advance_ctu() 10 3.081e-05 4.645e-05 6.276e-05 0.00% Castro::do_old_sources() 10 4.534e-05 5.316e-05 6.219e-05 0.00% Castro::apply_source_to_state() 20 3.529e-05 4.406e-05 6.151e-05 0.00% FabArrayBase::getCPC() 41 4.336e-05 4.906e-05 5.773e-05 0.00% Castro::construct_new_gravity() 10 4.158e-05 4.707e-05 5.525e-05 0.00% Castro::construct_old_gravity() 10 4.283e-05 4.967e-05 5.405e-05 0.00% FabArrayBase::CPC::define() 2 2.286e-05 3.006e-05 4.711e-05 0.00% Castro::advance() 10 3.264e-05 3.884e-05 4.475e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.204e-05 4.09e-05 0.00% Castro::check_for_nan() 20 2.402e-05 2.496e-05 2.614e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.183e-05 1.879e-05 2.536e-05 0.00% Gravity::swapTimeLevels() 10 1.106e-05 1.36e-05 2.021e-05 0.00% Castro::create_source_corrector() 10 1.512e-05 1.681e-05 1.867e-05 0.00% Castro::post_timestep() 10 7.872e-06 1.138e-05 1.812e-05 0.00% Amr::initSubcycle() 1 8.297e-06 1.052e-05 1.506e-05 0.00% Gravity::set_mass_offset() 10 7.363e-06 9.002e-06 1.253e-05 0.00% Amr::init() 1 2.253e-06 3.638e-06 1.158e-05 0.00% Castro::FluxRegFineAdd() 10 5.37e-06 6.824e-06 1.118e-05 0.00% Castro::retry_advance_ctu() 10 4.958e-06 6.127e-06 1.024e-05 0.00% Castro::computeNewDt() 9 6.975e-06 8.044e-06 9.702e-06 0.00% Amr::InitializeInit() 1 2.172e-06 4.579e-06 7.053e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.258e-06 5.454e-06 7.047e-06 0.00% Castro::post_init() 1 3.239e-06 4.825e-06 6.975e-06 0.00% Castro::post_regrid() 1 2.392e-06 3.549e-06 5.54e-06 0.00% Castro::computeInitialDt() 2 3.921e-06 4.459e-06 4.95e-06 0.00% Amr::initialInit() 1 1.097e-06 1.554e-06 2.385e-06 0.00% DistributionMapping::Distribute() 1 8.81e-07 1.29e-06 1.979e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.431 3.432 3.432 100.00% Amr::coarseTimeStep() 10 3.182 3.182 3.182 92.71% Amr::timeStep() 10 3.17 3.171 3.171 92.41% Castro::advance() 10 3.154 3.155 3.155 91.93% Castro::subcycle_advance_ctu() 10 3.071 3.079 3.087 89.95% Castro::do_advance_ctu() 10 3.071 3.079 3.087 89.95% Castro::construct_ctu_hydro_source() 10 2.131 2.159 2.208 64.33% Gravity::make_radial_gravity() 21 0.3752 0.386 0.3969 11.57% Gravity::get_new_grav_vector() 11 0.244 0.2452 0.2459 7.16% Castro::construct_old_gravity() 10 0.2217 0.2301 0.2397 6.98% Gravity::get_old_grav_vector() 10 0.221 0.2292 0.239 6.96% Amr::init() 1 0.2357 0.2358 0.2359 6.87% Amr::initialInit() 1 0.2191 0.2199 0.2207 6.43% Castro::construct_new_gravity() 10 0.2068 0.2078 0.209 6.09% FillPatchIterator::Initialize 41 0.1769 0.1873 0.1971 5.74% Castro::initialize_do_advance() 10 0.1575 0.1724 0.1859 5.42% Amr::InitializeInit() 1 0.06644 0.1059 0.1786 5.20% Amr::defBaseLevel() 1 0.06643 0.1059 0.1786 5.20% Castro::initData() 1 0.05167 0.09084 0.1598 4.66% FillPatchSingleLevel 41 0.1345 0.1459 0.1555 4.53% Castro::estTimeStep() 21 0.04214 0.1098 0.1544 4.50% Amr::FinalizeInit() 1 0.04193 0.114 0.1535 4.47% Castro::expand_state() 10 0.1137 0.1235 0.136 3.96% Castro::clean_state() 62 0.1135 0.1179 0.1227 3.58% MultiFab::min() 10 0.03004 0.08387 0.1153 3.36% Castro::computeInitialDt() 2 0.002469 0.07528 0.1147 3.34% FabArray::ParallelCopy() 41 0.08993 0.1026 0.114 3.32% FabArray::setVal() 143 0.06125 0.07151 0.08446 2.46% Castro::initialize_advance() 10 0.06756 0.07602 0.08394 2.45% Castro::do_new_sources() 10 0.05661 0.06369 0.07957 2.32% FabArray::ParallelCopy_finish() 41 0.04818 0.06267 0.07881 2.30% Castro::computeTemp() 63 0.06463 0.06829 0.07225 2.11% Castro::reset_internal_energy() 63 0.04763 0.04983 0.05257 1.53% Castro::do_old_sources() 10 0.04039 0.04511 0.04768 1.39% StateDataPhysBCFunct::() 41 0.04065 0.04325 0.04753 1.38% StateData::FillBoundary(geom) 41 0.04053 0.04312 0.04739 1.38% Castro::normalize_species() 62 0.04282 0.04445 0.04585 1.34% FabArray::ParallelCopy_nowait() 41 0.03514 0.03986 0.04172 1.22% Castro::construct_new_source() 50 0.02739 0.03121 0.03867 1.13% Castro::post_init() 1 0.03763 0.03819 0.03852 1.12% Castro::construct_new_gravity_source() 10 0.0214 0.02483 0.03229 0.94% Gravity::interpolate_monopole_grav() 21 0.02732 0.02825 0.02932 0.85% Amr::writePlotFile() 2 0.02463 0.02554 0.02641 0.77% Castro::post_timestep() 10 0.01502 0.01587 0.01668 0.49% VisMF::Write(FabArray) 2 0.01144 0.01262 0.01645 0.48% Castro::apply_source_to_state() 20 0.01227 0.01382 0.01474 0.43% MultiFab::Saxpy() 20 0.01223 0.01378 0.01469 0.43% Castro::check_for_nan() 20 0.01015 0.01101 0.01195 0.35% MultiFab::contains_nan() 20 0.01012 0.01098 0.01192 0.35% FabArray::setDomainBndry() 41 0.006791 0.009694 0.01116 0.33% Castro::construct_old_source() 50 0.007451 0.01015 0.01092 0.32% Castro::construct_old_gravity_source() 10 0.007398 0.01009 0.01084 0.32% Castro::computeNewDt() 9 0.007177 0.008752 0.01012 0.29% AmrLevel::AmrLevel(dm) 1 0.004344 0.005034 0.006492 0.19% StateData::define() 4 0.00433 0.005015 0.006467 0.19% Castro::enforce_min_density() 62 0.005785 0.006062 0.006356 0.19% Castro::swap_state_time_levels() 10 0.002793 0.003945 0.005527 0.16% Castro::post_regrid() 1 0.001532 0.0019 0.00286 0.08% Castro::finalize_do_advance() 10 0.0004933 0.0008871 0.001054 0.03% Amr::InitAmr() 1 0.0002896 0.0003567 0.0004778 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.961e-05 0.0001692 0.0002453 0.01% DistributionMapping::LeastUsedCPUs() 1 1.35e-05 0.0001625 0.0002372 0.01% Castro::enforce_consistent_e() 1 8.177e-05 9.971e-05 0.0001441 0.00% FabArrayBase::getCPC() 41 6.624e-05 7.913e-05 9.674e-05 0.00% Castro::finalize_advance() 10 5.625e-05 6.335e-05 7.862e-05 0.00% Amr::writeSmallPlotFile() 1 3.528e-05 4.9e-05 7.032e-05 0.00% FabArrayBase::CPC::define() 2 2.286e-05 3.006e-05 4.711e-05 0.00% Castro::enforce_speed_limit() 62 2.653e-05 3.204e-05 4.09e-05 0.00% Gravity::swapTimeLevels() 10 1.106e-05 1.36e-05 2.021e-05 0.00% Castro::create_source_corrector() 10 1.512e-05 1.681e-05 1.867e-05 0.00% Amr::initSubcycle() 1 8.297e-06 1.052e-05 1.506e-05 0.00% Gravity::set_mass_offset() 10 7.363e-06 9.002e-06 1.253e-05 0.00% Castro::FluxRegFineAdd() 10 5.37e-06 6.824e-06 1.118e-05 0.00% Castro::retry_advance_ctu() 10 4.958e-06 6.127e-06 1.024e-05 0.00% DistributionMapping::Distribute() 1 8.81e-07 1.29e-06 1.979e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-7-gec648a92a89f) finalized