MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-9-g84a1f7d0715b) initialized Starting run at 05:36:58 UTC on 2022-04-07. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-9-g84a1f7d07 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013330642 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.346463294 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327642789 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338278548 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.316937902 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.311577082 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.339135249 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298586255 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.293903485 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294506731 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290487852 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009758464 seconds Ending run at 05:37:01 UTC on 2022-04-07. Run time = 3.367856917 Run time without initialization = 3.17039415 Average number of zones advanced per microsecond: 0.827 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.367 ... 3.367 ... 3.368 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1686 2.1987 2.2579 67.04% Gravity::make_radial_gravity() 21 0.3365 0.3491 0.3647 10.83% Castro::initData() 1 0.04602 0.08216 0.1344 3.99% MultiFab::min() 10 0.02288 0.08779 0.1227 3.64% Castro::estTimeStep() 21 0.02062 0.07815 0.1181 3.51% FabArray::ParallelCopy_finish() 41 0.02903 0.04098 0.07472 2.22% FabArray::setVal() 143 0.05932 0.06901 0.07443 2.21% Castro::reset_internal_energy() 63 0.04943 0.05027 0.05153 1.53% StateData::FillBoundary(geom) 41 0.03858 0.04187 0.04584 1.36% Castro::normalize_species() 62 0.04232 0.04384 0.04444 1.32% FabArray::ParallelCopy_nowait() 41 0.03368 0.03946 0.0414 1.23% FillPatchIterator::Initialize 41 0.02301 0.02867 0.03158 0.94% Gravity::interpolate_monopole_grav() 21 0.02767 0.02821 0.02878 0.85% Castro::construct_new_gravity_source() 10 0.02049 0.02321 0.02616 0.78% Castro::do_advance_ctu() 10 0.01431 0.01885 0.02229 0.66% Castro::expand_state() 10 0.01222 0.01747 0.02011 0.60% Castro::computeTemp() 63 0.01838 0.01904 0.01976 0.59% Castro::initialize_do_advance() 10 0.01019 0.01588 0.01738 0.52% MultiFab::Saxpy() 20 0.01287 0.01434 0.01514 0.45% VisMF::Write(FabArray) 2 0.01157 0.01253 0.01489 0.44% Castro::initialize_advance() 10 0.008023 0.01135 0.01369 0.41% Gravity::get_new_grav_vector() 11 0.009337 0.01083 0.01297 0.39% MultiFab::contains_nan() 20 0.01045 0.01127 0.01234 0.37% Amr::writePlotFile() 2 0.008449 0.01065 0.01189 0.35% Castro::construct_old_gravity_source() 10 0.007023 0.01063 0.01154 0.34% FabArray::setDomainBndry() 41 0.006902 0.009389 0.01098 0.33% Gravity::get_old_grav_vector() 10 0.006683 0.008599 0.00981 0.29% Amr::defBaseLevel() 1 0.006774 0.007313 0.007638 0.23% Castro::construct_new_source() 50 0.005697 0.00632 0.006543 0.19% Castro::enforce_min_density() 62 0.005723 0.006049 0.006479 0.19% StateData::define() 4 0.004486 0.004774 0.00493 0.15% main() 1 0.003433 0.003674 0.004208 0.12% Castro::swap_state_time_levels() 10 0.002496 0.003528 0.004149 0.12% Amr::coarseTimeStep() 10 0.0004236 0.0006637 0.001033 0.03% Castro::finalize_do_advance() 10 0.0004735 0.0008544 0.0009853 0.03% Amr::timeStep() 10 0.0001568 0.0002257 0.000478 0.01% Amr::InitAmr() 1 0.0002559 0.0003032 0.0004258 0.01% DistributionMapping::LeastUsedCPUs() 1 6.944e-06 0.0001338 0.0002016 0.01% Castro::clean_state() 62 0.000125 0.0001366 0.0001579 0.00% StateDataPhysBCFunct::() 41 0.0001108 0.0001282 0.0001425 0.00% Castro::construct_old_source() 50 6.895e-05 8.176e-05 9.4e-05 0.00% Castro::enforce_consistent_e() 1 8.072e-05 8.894e-05 9.374e-05 0.00% FabArray::ParallelCopy() 41 6.41e-05 7.63e-05 9.191e-05 0.00% Amr::FinalizeInit() 1 3.642e-06 1.353e-05 7.551e-05 0.00% Amr::writeSmallPlotFile() 1 3.107e-05 5.66e-05 7.519e-05 0.00% Castro::subcycle_advance_ctu() 10 3.536e-05 5.611e-05 7.496e-05 0.00% FillPatchSingleLevel 41 5.736e-05 6.536e-05 7.49e-05 0.00% FabArrayBase::getCPC() 41 4.433e-05 5.444e-05 7.306e-05 0.00% Castro::do_old_sources() 10 5.321e-05 6.128e-05 6.833e-05 0.00% Castro::construct_old_gravity() 10 5.063e-05 5.414e-05 6.563e-05 0.00% Castro::do_new_sources() 10 5.504e-05 6.047e-05 6.441e-05 0.00% Castro::advance() 10 3.661e-05 4.544e-05 6.093e-05 0.00% Castro::finalize_advance() 10 4.957e-05 5.279e-05 6.08e-05 0.00% Castro::construct_new_gravity() 10 3.909e-05 4.941e-05 6.044e-05 0.00% Castro::apply_source_to_state() 20 3.902e-05 4.668e-05 5.242e-05 0.00% Castro::enforce_speed_limit() 62 2.948e-05 3.183e-05 3.985e-05 0.00% FabArrayBase::CPC::define() 2 2.157e-05 2.54e-05 3.218e-05 0.00% Castro::check_for_nan() 20 2.295e-05 2.504e-05 2.764e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.275e-05 1.676e-05 2.13e-05 0.00% Castro::create_source_corrector() 10 1.482e-05 1.717e-05 1.9e-05 0.00% Amr::initSubcycle() 1 8.791e-06 1.036e-05 1.763e-05 0.00% Castro::post_timestep() 10 8.079e-06 9.829e-06 1.454e-05 0.00% Gravity::swapTimeLevels() 10 1.025e-05 1.232e-05 1.403e-05 0.00% Gravity::set_mass_offset() 10 7.503e-06 9.28e-06 1.246e-05 0.00% Amr::InitializeInit() 1 2.289e-06 5.639e-06 1.166e-05 0.00% Castro::post_init() 1 2.451e-06 4.587e-06 1.028e-05 0.00% Castro::computeNewDt() 9 6.271e-06 8.074e-06 9.554e-06 0.00% Castro::FluxRegFineAdd() 10 5.931e-06 7.114e-06 8.171e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.205e-06 5.067e-06 8.084e-06 0.00% Castro::retry_advance_ctu() 10 5.17e-06 5.869e-06 6.739e-06 0.00% Amr::init() 1 1.964e-06 2.66e-06 6.161e-06 0.00% Castro::computeInitialDt() 2 3.21e-06 3.742e-06 4.656e-06 0.00% Castro::post_regrid() 1 2.175e-06 2.937e-06 3.896e-06 0.00% Amr::initialInit() 1 1.195e-06 1.448e-06 1.672e-06 0.00% DistributionMapping::Distribute() 1 9.8e-07 1.114e-06 1.273e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.367 3.367 3.368 100.00% Amr::coarseTimeStep() 10 3.156 3.156 3.156 93.72% Amr::timeStep() 10 3.145 3.145 3.147 93.43% Castro::advance() 10 3.129 3.129 3.129 92.92% Castro::subcycle_advance_ctu() 10 3.053 3.057 3.067 91.06% Castro::do_advance_ctu() 10 3.053 3.057 3.067 91.06% Castro::construct_ctu_hydro_source() 10 2.169 2.199 2.258 67.04% Gravity::make_radial_gravity() 21 0.3365 0.3491 0.3647 10.83% Gravity::get_new_grav_vector() 11 0.2222 0.2235 0.225 6.68% Castro::construct_old_gravity() 10 0.2003 0.2098 0.2218 6.59% Gravity::get_old_grav_vector() 10 0.1995 0.209 0.2212 6.57% Castro::construct_new_gravity() 10 0.1964 0.1973 0.1982 5.89% Amr::init() 1 0.1969 0.197 0.1971 5.85% Amr::initialInit() 1 0.1834 0.1837 0.184 5.46% FillPatchIterator::Initialize 41 0.1501 0.1607 0.1773 5.26% Castro::initialize_do_advance() 10 0.1441 0.1526 0.1567 4.65% Amr::InitializeInit() 1 0.06563 0.1011 0.154 4.57% Amr::defBaseLevel() 1 0.06562 0.1011 0.154 4.57% FillPatchSingleLevel 41 0.1133 0.1227 0.1474 4.38% Castro::initData() 1 0.05023 0.08629 0.1386 4.12% MultiFab::min() 10 0.02288 0.08779 0.1227 3.64% Castro::clean_state() 62 0.1155 0.1184 0.1207 3.58% Amr::FinalizeInit() 1 0.02998 0.08258 0.1184 3.52% Castro::estTimeStep() 21 0.02062 0.07815 0.1181 3.51% Castro::expand_state() 10 0.09597 0.1053 0.113 3.35% FabArray::ParallelCopy() 41 0.06934 0.08059 0.1086 3.22% Castro::computeInitialDt() 2 0.001744 0.05465 0.09013 2.68% Castro::initialize_advance() 10 0.06198 0.07231 0.07588 2.25% FabArray::ParallelCopy_finish() 41 0.02903 0.04098 0.07472 2.22% FabArray::setVal() 143 0.05932 0.06901 0.07443 2.21% Castro::computeTemp() 63 0.06806 0.06931 0.07084 2.10% Castro::do_new_sources() 10 0.05757 0.06238 0.06708 1.99% Castro::reset_internal_energy() 63 0.04943 0.05027 0.05153 1.53% Castro::do_old_sources() 10 0.04039 0.04645 0.048 1.43% StateDataPhysBCFunct::() 41 0.03872 0.042 0.04597 1.36% StateData::FillBoundary(geom) 41 0.03858 0.04187 0.04584 1.36% Castro::normalize_species() 62 0.04232 0.04384 0.04444 1.32% FabArray::ParallelCopy_nowait() 41 0.03379 0.03954 0.04147 1.23% Castro::construct_new_source() 50 0.02619 0.02953 0.0327 0.97% Gravity::interpolate_monopole_grav() 21 0.02767 0.02821 0.02878 0.85% Castro::post_init() 1 0.02689 0.02717 0.02733 0.81% Castro::construct_new_gravity_source() 10 0.02049 0.02321 0.02616 0.78% Amr::writePlotFile() 2 0.02285 0.02317 0.02354 0.70% Castro::post_timestep() 10 0.01557 0.01593 0.01674 0.50% Castro::apply_source_to_state() 20 0.01293 0.01438 0.01519 0.45% MultiFab::Saxpy() 20 0.01287 0.01434 0.01514 0.45% VisMF::Write(FabArray) 2 0.01157 0.01253 0.01489 0.44% Castro::check_for_nan() 20 0.01048 0.0113 0.01236 0.37% MultiFab::contains_nan() 20 0.01045 0.01127 0.01234 0.37% Castro::construct_old_source() 50 0.007092 0.01071 0.01162 0.35% Castro::construct_old_gravity_source() 10 0.007023 0.01063 0.01154 0.34% FabArray::setDomainBndry() 41 0.006902 0.009389 0.01098 0.33% Castro::computeNewDt() 9 0.007934 0.009436 0.01 0.30% Castro::enforce_min_density() 62 0.005723 0.006049 0.006479 0.19% AmrLevel::AmrLevel(dm) 1 0.004499 0.004791 0.004947 0.15% StateData::define() 4 0.004486 0.004774 0.00493 0.15% Castro::swap_state_time_levels() 10 0.002496 0.003528 0.004149 0.12% Castro::post_regrid() 1 0.001554 0.001671 0.001922 0.06% Castro::finalize_do_advance() 10 0.0004735 0.0008544 0.0009853 0.03% Amr::InitAmr() 1 0.000265 0.0003136 0.0004355 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.246e-05 0.0001399 0.0002086 0.01% DistributionMapping::LeastUsedCPUs() 1 6.944e-06 0.0001338 0.0002016 0.01% FabArrayBase::getCPC() 41 6.59e-05 7.984e-05 0.0001052 0.00% Castro::enforce_consistent_e() 1 8.072e-05 8.894e-05 9.374e-05 0.00% Amr::writeSmallPlotFile() 1 3.107e-05 5.66e-05 7.519e-05 0.00% Castro::finalize_advance() 10 5.699e-05 5.991e-05 6.707e-05 0.00% Castro::enforce_speed_limit() 62 2.948e-05 3.183e-05 3.985e-05 0.00% FabArrayBase::CPC::define() 2 2.157e-05 2.54e-05 3.218e-05 0.00% Castro::create_source_corrector() 10 1.482e-05 1.717e-05 1.9e-05 0.00% Amr::initSubcycle() 1 8.791e-06 1.036e-05 1.763e-05 0.00% Gravity::swapTimeLevels() 10 1.025e-05 1.232e-05 1.403e-05 0.00% Gravity::set_mass_offset() 10 7.503e-06 9.28e-06 1.246e-05 0.00% Castro::FluxRegFineAdd() 10 5.931e-06 7.114e-06 8.171e-06 0.00% Castro::retry_advance_ctu() 10 5.17e-06 5.869e-06 6.739e-06 0.00% DistributionMapping::Distribute() 1 9.8e-07 1.114e-06 1.273e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-9-g84a1f7d0715b) finalized