MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-10-g1a5d8917fd49) initialized Starting run at 05:37:12 UTC on 2022-04-08. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-10-g1a5d8917f Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014534272 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.340897852 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.323444948 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.317996171 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314767214 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312114897 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33862779 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297023507 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290596422 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.293686601 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.295013978 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00928922 seconds Ending run at 05:37:16 UTC on 2022-04-08. Run time = 3.317643534 Run time without initialization = 3.136884398 Average number of zones advanced per microsecond: 0.836 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.317 ... 3.317 ... 3.318 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1251 2.1782 2.2225 66.99% Gravity::make_radial_gravity() 21 0.3316 0.3441 0.3591 10.82% MultiFab::min() 10 0.01908 0.06505 0.1206 3.64% Castro::initData() 1 0.03809 0.089 0.12 3.62% Castro::estTimeStep() 21 0.01778 0.05272 0.1093 3.30% FabArray::setVal() 143 0.06752 0.07193 0.07694 2.32% FabArray::ParallelCopy_finish() 41 0.03262 0.03955 0.06265 1.89% Castro::reset_internal_energy() 63 0.04827 0.0502 0.05182 1.56% StateData::FillBoundary(geom) 41 0.04005 0.04192 0.04548 1.37% Castro::normalize_species() 62 0.04312 0.04369 0.04546 1.37% FabArray::ParallelCopy_nowait() 41 0.0361 0.0417 0.04459 1.34% FillPatchIterator::Initialize 41 0.0242 0.03139 0.03454 1.04% Gravity::interpolate_monopole_grav() 21 0.02745 0.02792 0.02828 0.85% Castro::construct_new_gravity_source() 10 0.02113 0.02379 0.02641 0.80% Castro::do_advance_ctu() 10 0.01821 0.02024 0.02387 0.72% Castro::expand_state() 10 0.0115 0.01846 0.02145 0.65% Castro::computeTemp() 63 0.01856 0.01896 0.01938 0.58% Castro::initialize_do_advance() 10 0.01131 0.01644 0.01884 0.57% MultiFab::Saxpy() 20 0.01416 0.01545 0.01611 0.49% VisMF::Write(FabArray) 2 0.01164 0.01243 0.01557 0.47% Castro::initialize_advance() 10 0.01089 0.01268 0.01485 0.45% Gravity::get_new_grav_vector() 11 0.009959 0.01126 0.01302 0.39% Amr::writePlotFile() 2 0.008461 0.01172 0.01266 0.38% MultiFab::contains_nan() 20 0.01054 0.01128 0.01222 0.37% Castro::construct_old_gravity_source() 10 0.007288 0.0111 0.01193 0.36% FabArray::setDomainBndry() 41 0.00711 0.01043 0.01189 0.36% Gravity::get_old_grav_vector() 10 0.007087 0.009063 0.01037 0.31% Amr::defBaseLevel() 1 0.00658 0.007836 0.01013 0.31% Castro::construct_new_source() 50 0.006063 0.006534 0.006823 0.21% Castro::enforce_min_density() 62 0.005905 0.006165 0.006501 0.20% StateData::define() 4 0.004424 0.005139 0.006474 0.20% Castro::swap_state_time_levels() 10 0.002976 0.003826 0.004036 0.12% main() 1 0.003287 0.003609 0.003986 0.12% Castro::finalize_do_advance() 10 0.0004702 0.0007999 0.0009532 0.03% Amr::coarseTimeStep() 10 0.0003771 0.0005079 0.0008014 0.02% Amr::InitAmr() 1 0.0002747 0.0003464 0.0005785 0.02% Amr::timeStep() 10 0.0001598 0.0002259 0.0004511 0.01% DistributionMapping::LeastUsedCPUs() 1 8.837e-06 0.0002752 0.0003651 0.01% Castro::clean_state() 62 0.0001197 0.0001363 0.0001636 0.00% StateDataPhysBCFunct::() 41 0.0001208 0.0001315 0.0001407 0.00% Castro::enforce_consistent_e() 1 7.628e-05 9.998e-05 0.0001327 0.00% Castro::construct_old_source() 50 7.254e-05 8.706e-05 0.000104 0.00% FillPatchSingleLevel 41 5.987e-05 6.876e-05 8.382e-05 0.00% FabArray::ParallelCopy() 41 6.443e-05 7.178e-05 8.085e-05 0.00% FabArrayBase::getCPC() 41 4.739e-05 6.013e-05 7.997e-05 0.00% Castro::do_old_sources() 10 4.775e-05 6.198e-05 7.477e-05 0.00% Castro::subcycle_advance_ctu() 10 4.155e-05 5.789e-05 7.401e-05 0.00% Castro::do_new_sources() 10 4.954e-05 6.335e-05 7.056e-05 0.00% Amr::writeSmallPlotFile() 1 2.454e-05 5.137e-05 6.974e-05 0.00% Amr::FinalizeInit() 1 3.711e-06 1.263e-05 6.967e-05 0.00% Castro::construct_old_gravity() 10 4.974e-05 5.553e-05 6.313e-05 0.00% Castro::construct_new_gravity() 10 4.056e-05 5.023e-05 6.197e-05 0.00% Castro::finalize_advance() 10 5.052e-05 5.425e-05 5.821e-05 0.00% Castro::apply_source_to_state() 20 4.378e-05 5.101e-05 5.747e-05 0.00% Castro::advance() 10 3.714e-05 4.433e-05 5.459e-05 0.00% Castro::enforce_speed_limit() 62 2.973e-05 3.356e-05 4.295e-05 0.00% FabArrayBase::CPC::define() 2 2.167e-05 2.574e-05 3.446e-05 0.00% Castro::check_for_nan() 20 2.267e-05 2.574e-05 2.907e-05 0.00% Castro::create_source_corrector() 10 1.572e-05 1.767e-05 2.113e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.215e-05 1.704e-05 2.034e-05 0.00% Gravity::swapTimeLevels() 10 1.032e-05 1.398e-05 1.586e-05 0.00% Amr::initSubcycle() 1 8.557e-06 1.064e-05 1.503e-05 0.00% Castro::post_timestep() 10 8.737e-06 9.763e-06 1.304e-05 0.00% Castro::post_init() 1 3.192e-06 5.881e-06 1.281e-05 0.00% Gravity::set_mass_offset() 10 7.609e-06 8.674e-06 1.009e-05 0.00% Amr::InitializeInit() 1 2.272e-06 3.758e-06 8.709e-06 0.00% Amr::initialInit() 1 1.182e-06 2.348e-06 8.571e-06 0.00% Castro::computeNewDt() 9 6.992e-06 7.871e-06 8.369e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.779e-06 5.141e-06 8.227e-06 0.00% Castro::FluxRegFineAdd() 10 5.539e-06 6.433e-06 7.621e-06 0.00% Castro::retry_advance_ctu() 10 5.334e-06 5.903e-06 6.264e-06 0.00% Castro::computeInitialDt() 2 3.125e-06 3.838e-06 4.407e-06 0.00% Castro::post_regrid() 1 1.887e-06 3.019e-06 4.248e-06 0.00% Amr::init() 1 1.876e-06 2.275e-06 2.949e-06 0.00% DistributionMapping::Distribute() 1 8.46e-07 1.176e-06 1.545e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.317 3.317 3.318 100.00% Amr::coarseTimeStep() 10 3.124 3.124 3.124 94.15% Amr::timeStep() 10 3.114 3.115 3.115 93.89% Castro::advance() 10 3.098 3.099 3.099 93.40% Castro::subcycle_advance_ctu() 10 3.019 3.022 3.025 91.17% Castro::do_advance_ctu() 10 3.019 3.021 3.025 91.16% Castro::construct_ctu_hydro_source() 10 2.125 2.178 2.222 66.99% Gravity::make_radial_gravity() 21 0.3316 0.3441 0.3591 10.82% Gravity::get_new_grav_vector() 11 0.2233 0.225 0.2261 6.81% Castro::construct_old_gravity() 10 0.1952 0.2048 0.2177 6.56% Gravity::get_old_grav_vector() 10 0.1944 0.204 0.2171 6.54% Castro::construct_new_gravity() 10 0.2006 0.2014 0.2021 6.09% Amr::init() 1 0.18 0.1803 0.1804 5.44% FillPatchIterator::Initialize 41 0.1581 0.1653 0.1714 5.17% Amr::initialInit() 1 0.1654 0.1655 0.1657 4.99% Castro::initialize_do_advance() 10 0.1434 0.1559 0.1621 4.89% FillPatchSingleLevel 41 0.1173 0.1235 0.1401 4.22% Amr::InitializeInit() 1 0.05526 0.1086 0.1387 4.18% Amr::defBaseLevel() 1 0.05526 0.1086 0.1387 4.18% Castro::initData() 1 0.04199 0.09336 0.1237 3.73% Castro::clean_state() 62 0.1155 0.1181 0.121 3.65% MultiFab::min() 10 0.01908 0.06505 0.1206 3.64% Castro::expand_state() 10 0.1016 0.108 0.1134 3.42% Amr::FinalizeInit() 1 0.02676 0.05689 0.1105 3.33% Castro::estTimeStep() 21 0.01778 0.05272 0.1093 3.30% FabArray::ParallelCopy() 41 0.07571 0.08141 0.09895 2.98% Castro::computeInitialDt() 2 0.001683 0.0317 0.08514 2.57% Castro::initialize_advance() 10 0.07396 0.07696 0.07965 2.40% FabArray::setVal() 143 0.06752 0.07193 0.07694 2.32% Castro::computeTemp() 63 0.06684 0.06916 0.07073 2.13% Castro::do_new_sources() 10 0.06062 0.06357 0.06832 2.06% FabArray::ParallelCopy_finish() 41 0.03262 0.03955 0.06265 1.89% Castro::reset_internal_energy() 63 0.04827 0.0502 0.05182 1.56% Castro::do_old_sources() 10 0.04299 0.0476 0.04852 1.46% StateDataPhysBCFunct::() 41 0.04018 0.04205 0.04561 1.37% StateData::FillBoundary(geom) 41 0.04005 0.04192 0.04548 1.37% Castro::normalize_species() 62 0.04312 0.04369 0.04546 1.37% FabArray::ParallelCopy_nowait() 41 0.03622 0.04179 0.04468 1.35% Castro::construct_new_source() 50 0.02719 0.03033 0.03322 1.00% Gravity::interpolate_monopole_grav() 21 0.02745 0.02792 0.02828 0.85% Castro::construct_new_gravity_source() 10 0.02113 0.02379 0.02641 0.80% Castro::post_init() 1 0.02427 0.02454 0.02471 0.74% Amr::writePlotFile() 2 0.02403 0.02415 0.0243 0.73% Castro::post_timestep() 10 0.01566 0.01588 0.01623 0.49% Castro::apply_source_to_state() 20 0.01422 0.01551 0.01616 0.49% MultiFab::Saxpy() 20 0.01416 0.01545 0.01611 0.49% VisMF::Write(FabArray) 2 0.01164 0.01243 0.01557 0.47% Castro::check_for_nan() 20 0.01056 0.01131 0.01225 0.37% MultiFab::contains_nan() 20 0.01054 0.01128 0.01222 0.37% Castro::construct_old_source() 50 0.007362 0.01119 0.01202 0.36% Castro::construct_old_gravity_source() 10 0.007288 0.0111 0.01193 0.36% FabArray::setDomainBndry() 41 0.00711 0.01043 0.01189 0.36% Castro::computeNewDt() 9 0.00684 0.00751 0.00802 0.24% Castro::enforce_min_density() 62 0.005905 0.006165 0.006501 0.20% AmrLevel::AmrLevel(dm) 1 0.00444 0.005156 0.006494 0.20% StateData::define() 4 0.004424 0.005139 0.006474 0.20% Castro::swap_state_time_levels() 10 0.002976 0.003826 0.004036 0.12% Castro::post_regrid() 1 0.001522 0.001622 0.001894 0.06% Castro::finalize_do_advance() 10 0.0004702 0.0007999 0.0009532 0.03% Amr::InitAmr() 1 0.0002835 0.000357 0.0005936 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.437e-05 0.0002816 0.0003724 0.01% DistributionMapping::LeastUsedCPUs() 1 8.837e-06 0.0002752 0.0003651 0.01% Castro::enforce_consistent_e() 1 7.628e-05 9.998e-05 0.0001327 0.00% FabArrayBase::getCPC() 41 6.993e-05 8.586e-05 0.0001144 0.00% Amr::writeSmallPlotFile() 1 2.454e-05 5.137e-05 6.974e-05 0.00% Castro::finalize_advance() 10 5.606e-05 6.068e-05 6.583e-05 0.00% Castro::enforce_speed_limit() 62 2.973e-05 3.356e-05 4.295e-05 0.00% FabArrayBase::CPC::define() 2 2.167e-05 2.574e-05 3.446e-05 0.00% Castro::create_source_corrector() 10 1.572e-05 1.767e-05 2.113e-05 0.00% Gravity::swapTimeLevels() 10 1.032e-05 1.398e-05 1.586e-05 0.00% Amr::initSubcycle() 1 8.557e-06 1.064e-05 1.503e-05 0.00% Gravity::set_mass_offset() 10 7.609e-06 8.674e-06 1.009e-05 0.00% Castro::FluxRegFineAdd() 10 5.539e-06 6.433e-06 7.621e-06 0.00% Castro::retry_advance_ctu() 10 5.334e-06 5.903e-06 6.264e-06 0.00% DistributionMapping::Distribute() 1 8.46e-07 1.176e-06 1.545e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-10-g1a5d8917fd49) finalized