MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-14-gd70f70e2f56e) initialized Starting run at 05:37:08 UTC on 2022-04-11. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-14-gd70f70e2f Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012941596 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.361906731 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.371093907 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.366520153 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311919049 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.325142733 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.312394812 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.292464128 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29174997 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.2924068 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.293594931 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009477849 seconds Ending run at 05:37:12 UTC on 2022-04-11. Run time = 3.429831855 Run time without initialization = 3.23124308 Average number of zones advanced per microsecond: 0.811 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.429 ... 3.43 ... 3.43 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1273 2.1929 2.2469 65.51% Gravity::make_radial_gravity() 21 0.3575 0.3676 0.3768 10.98% MultiFab::min() 10 0.06304 0.1164 0.1845 5.38% Castro::estTimeStep() 21 0.02002 0.08978 0.1402 4.09% Castro::initData() 1 0.03865 0.0808 0.1364 3.98% FabArray::setVal() 143 0.06245 0.06908 0.07847 2.29% FabArray::ParallelCopy_finish() 41 0.03457 0.04992 0.07464 2.18% Castro::reset_internal_energy() 63 0.04812 0.05034 0.05391 1.57% Castro::normalize_species() 62 0.04338 0.04459 0.0469 1.37% StateData::FillBoundary(geom) 41 0.0389 0.0417 0.04437 1.29% FabArray::ParallelCopy_nowait() 41 0.03436 0.03974 0.04172 1.22% FillPatchIterator::Initialize 41 0.02482 0.03028 0.03275 0.95% Castro::construct_new_gravity_source() 10 0.02127 0.02469 0.0309 0.90% Gravity::interpolate_monopole_grav() 21 0.02768 0.02882 0.03027 0.88% Castro::do_advance_ctu() 10 0.01757 0.01908 0.02192 0.64% Castro::computeTemp() 63 0.01828 0.01912 0.02107 0.61% Castro::initialize_do_advance() 10 0.01157 0.01665 0.01894 0.55% Castro::expand_state() 10 0.01224 0.01698 0.01883 0.55% MultiFab::Saxpy() 20 0.0126 0.01383 0.01472 0.43% VisMF::Write(FabArray) 2 0.01149 0.0122 0.01448 0.42% Gravity::get_new_grav_vector() 11 0.008841 0.01057 0.01212 0.35% Castro::initialize_advance() 10 0.004591 0.009551 0.01207 0.35% MultiFab::contains_nan() 20 0.009981 0.01076 0.01207 0.35% Amr::writePlotFile() 2 0.00817 0.0106 0.01142 0.33% FabArray::setDomainBndry() 41 0.006893 0.009968 0.01115 0.33% Castro::construct_old_gravity_source() 10 0.008175 0.01011 0.01088 0.32% Gravity::get_old_grav_vector() 10 0.007358 0.008592 0.009268 0.27% Amr::defBaseLevel() 1 0.006456 0.00686 0.008058 0.23% Castro::enforce_min_density() 62 0.006466 0.006735 0.007085 0.21% Castro::construct_new_source() 50 0.005922 0.006179 0.006399 0.19% StateData::define() 4 0.004227 0.004367 0.004716 0.14% Castro::swap_state_time_levels() 10 0.002736 0.00349 0.003999 0.12% main() 1 0.003402 0.003632 0.003913 0.11% Amr::coarseTimeStep() 10 0.0003026 0.000884 0.002187 0.06% Castro::finalize_do_advance() 10 0.0005774 0.0008692 0.001027 0.03% Amr::timeStep() 10 0.0001605 0.0002579 0.0004864 0.01% Amr::InitAmr() 1 0.0002591 0.0002827 0.0003621 0.01% Castro::clean_state() 62 0.0001218 0.0001365 0.0001697 0.00% StateDataPhysBCFunct::() 41 0.0001081 0.0001236 0.0001474 0.00% DistributionMapping::LeastUsedCPUs() 1 7.142e-06 8.389e-05 0.0001085 0.00% Castro::enforce_consistent_e() 1 8.12e-05 8.893e-05 0.0001004 0.00% Castro::construct_old_source() 50 5.992e-05 7.437e-05 9.552e-05 0.00% FabArray::ParallelCopy() 41 6.398e-05 7.307e-05 8.303e-05 0.00% FillPatchSingleLevel 41 5.709e-05 6.538e-05 7.519e-05 0.00% Amr::writeSmallPlotFile() 1 2.615e-05 5.607e-05 7.235e-05 0.00% FabArrayBase::getCPC() 41 4.655e-05 5.478e-05 7.106e-05 0.00% Castro::do_old_sources() 10 5.28e-05 5.964e-05 6.946e-05 0.00% Castro::do_new_sources() 10 5.336e-05 6.032e-05 6.851e-05 0.00% Amr::FinalizeInit() 1 3.558e-06 1.179e-05 6.273e-05 0.00% Castro::construct_old_gravity() 10 4.717e-05 5.56e-05 6.071e-05 0.00% Castro::advance() 10 3.807e-05 4.348e-05 5.913e-05 0.00% Castro::finalize_advance() 10 5.093e-05 5.414e-05 5.91e-05 0.00% Castro::subcycle_advance_ctu() 10 4.111e-05 5.128e-05 5.82e-05 0.00% Castro::construct_new_gravity() 10 4.057e-05 4.845e-05 5.689e-05 0.00% Castro::apply_source_to_state() 20 4.018e-05 4.497e-05 5.073e-05 0.00% Castro::enforce_speed_limit() 62 2.812e-05 3.214e-05 4.188e-05 0.00% FabArrayBase::CPC::define() 2 2.221e-05 2.574e-05 3.184e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.66e-05 2.178e-05 3.162e-05 0.00% Castro::check_for_nan() 20 2.232e-05 2.543e-05 2.763e-05 0.00% Castro::create_source_corrector() 10 1.232e-05 1.639e-05 1.981e-05 0.00% Castro::post_timestep() 10 8.462e-06 1.379e-05 1.828e-05 0.00% Amr::initSubcycle() 1 8.278e-06 9.727e-06 1.498e-05 0.00% Gravity::swapTimeLevels() 10 1.014e-05 1.223e-05 1.405e-05 0.00% Castro::post_init() 1 2.836e-06 4.739e-06 1.133e-05 0.00% Castro::computeNewDt() 9 6.602e-06 7.857e-06 9.145e-06 0.00% Gravity::set_mass_offset() 10 6.694e-06 8.201e-06 9.032e-06 0.00% Castro::FluxRegFineAdd() 10 6.241e-06 7.094e-06 8.07e-06 0.00% Castro::post_regrid() 1 2.056e-06 3.585e-06 7.569e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.578e-06 4.769e-06 6.886e-06 0.00% Castro::retry_advance_ctu() 10 5.037e-06 5.768e-06 6.856e-06 0.00% Amr::InitializeInit() 1 2.097e-06 2.738e-06 6.078e-06 0.00% Castro::computeInitialDt() 2 2.913e-06 4.049e-06 5.319e-06 0.00% Amr::init() 1 1.754e-06 2.071e-06 2.73e-06 0.00% Amr::initialInit() 1 1.149e-06 1.376e-06 1.696e-06 0.00% DistributionMapping::Distribute() 1 9.93e-07 1.078e-06 1.2e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.429 3.43 3.43 100.00% Amr::coarseTimeStep() 10 3.218 3.218 3.218 93.82% Amr::timeStep() 10 3.207 3.207 3.208 93.52% Castro::advance() 10 3.19 3.191 3.191 93.03% Castro::subcycle_advance_ctu() 10 3.111 3.12 3.126 91.13% Castro::do_advance_ctu() 10 3.111 3.12 3.126 91.13% Castro::construct_ctu_hydro_source() 10 2.127 2.193 2.247 65.51% Gravity::make_radial_gravity() 21 0.3575 0.3676 0.3768 10.98% Gravity::get_new_grav_vector() 11 0.2352 0.2362 0.2374 6.92% Castro::construct_old_gravity() 10 0.2112 0.219 0.2263 6.60% Gravity::get_old_grav_vector() 10 0.2101 0.2181 0.2256 6.58% Castro::construct_new_gravity() 10 0.2095 0.2103 0.2111 6.16% Amr::init() 1 0.1981 0.1981 0.1982 5.78% Amr::initialInit() 1 0.1848 0.1849 0.1852 5.40% MultiFab::min() 10 0.06304 0.1164 0.1845 5.38% FillPatchIterator::Initialize 41 0.1572 0.172 0.1829 5.33% Castro::initialize_do_advance() 10 0.1506 0.161 0.1692 4.93% Amr::InitializeInit() 1 0.05697 0.09891 0.1556 4.54% Amr::defBaseLevel() 1 0.05696 0.0989 0.1556 4.54% FillPatchSingleLevel 41 0.1143 0.1317 0.1512 4.41% Castro::initData() 1 0.04347 0.08497 0.1406 4.10% Castro::estTimeStep() 21 0.02002 0.08978 0.1402 4.09% Castro::clean_state() 62 0.1161 0.1199 0.128 3.73% Amr::FinalizeInit() 1 0.02954 0.08603 0.1279 3.73% Castro::expand_state() 10 0.09984 0.1126 0.1212 3.53% FabArray::ParallelCopy() 41 0.07523 0.08981 0.1092 3.18% Castro::computeInitialDt() 2 0.001918 0.05867 0.1006 2.93% Castro::initialize_advance() 10 0.06456 0.07045 0.0791 2.31% FabArray::setVal() 143 0.06245 0.06908 0.07847 2.29% Castro::do_new_sources() 10 0.05816 0.06508 0.0774 2.26% Castro::computeTemp() 63 0.06669 0.06946 0.07498 2.19% FabArray::ParallelCopy_finish() 41 0.03457 0.04992 0.07464 2.18% Castro::reset_internal_energy() 63 0.04812 0.05034 0.05391 1.57% Castro::normalize_species() 62 0.04338 0.04459 0.0469 1.37% Castro::do_old_sources() 10 0.04216 0.04491 0.04676 1.36% StateDataPhysBCFunct::() 41 0.03902 0.04183 0.04449 1.30% StateData::FillBoundary(geom) 41 0.0389 0.0417 0.04437 1.29% FabArray::ParallelCopy_nowait() 41 0.03447 0.03982 0.0418 1.22% Castro::construct_new_source() 50 0.02747 0.03087 0.0373 1.09% Castro::construct_new_gravity_source() 10 0.02127 0.02469 0.0309 0.90% Gravity::interpolate_monopole_grav() 21 0.02768 0.02882 0.03027 0.88% Castro::post_init() 1 0.02628 0.02665 0.02678 0.78% Amr::writePlotFile() 2 0.02254 0.0228 0.02298 0.67% Castro::post_timestep() 10 0.01561 0.01623 0.01673 0.49% Castro::apply_source_to_state() 20 0.01265 0.01388 0.01477 0.43% MultiFab::Saxpy() 20 0.0126 0.01383 0.01472 0.43% VisMF::Write(FabArray) 2 0.01149 0.0122 0.01448 0.42% Castro::check_for_nan() 20 0.01001 0.01078 0.0121 0.35% MultiFab::contains_nan() 20 0.009981 0.01076 0.01207 0.35% FabArray::setDomainBndry() 41 0.006893 0.009968 0.01115 0.33% Castro::construct_old_source() 50 0.008244 0.01019 0.01097 0.32% Castro::construct_old_gravity_source() 10 0.008175 0.01011 0.01088 0.32% Castro::computeNewDt() 9 0.007689 0.008991 0.009715 0.28% Castro::enforce_min_density() 62 0.006466 0.006735 0.007085 0.21% AmrLevel::AmrLevel(dm) 1 0.004249 0.004389 0.004742 0.14% StateData::define() 4 0.004227 0.004367 0.004716 0.14% Castro::swap_state_time_levels() 10 0.002736 0.00349 0.003999 0.12% Castro::post_regrid() 1 0.00153 0.001698 0.00203 0.06% Castro::finalize_do_advance() 10 0.0005774 0.0008692 0.001027 0.03% Amr::InitAmr() 1 0.0002674 0.0002924 0.0003705 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.182e-05 8.974e-05 0.0001157 0.00% DistributionMapping::LeastUsedCPUs() 1 7.142e-06 8.389e-05 0.0001085 0.00% FabArrayBase::getCPC() 41 7.068e-05 8.052e-05 0.000102 0.00% Castro::enforce_consistent_e() 1 8.12e-05 8.893e-05 0.0001004 0.00% Amr::writeSmallPlotFile() 1 2.615e-05 5.607e-05 7.235e-05 0.00% Castro::finalize_advance() 10 5.802e-05 6.124e-05 6.562e-05 0.00% Castro::enforce_speed_limit() 62 2.812e-05 3.214e-05 4.188e-05 0.00% FabArrayBase::CPC::define() 2 2.221e-05 2.574e-05 3.184e-05 0.00% Castro::create_source_corrector() 10 1.232e-05 1.639e-05 1.981e-05 0.00% Amr::initSubcycle() 1 8.278e-06 9.727e-06 1.498e-05 0.00% Gravity::swapTimeLevels() 10 1.014e-05 1.223e-05 1.405e-05 0.00% Gravity::set_mass_offset() 10 6.694e-06 8.201e-06 9.032e-06 0.00% Castro::FluxRegFineAdd() 10 6.241e-06 7.094e-06 8.07e-06 0.00% Castro::retry_advance_ctu() 10 5.037e-06 5.768e-06 6.856e-06 0.00% DistributionMapping::Distribute() 1 9.93e-07 1.078e-06 1.2e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-14-gd70f70e2f56e) finalized