MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-18-ga537fb0516d5) initialized Starting run at 05:39:32 UTC on 2022-04-12. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-18-ga537fb051 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013852346 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.352721436 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.35211547 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.334740076 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.328265073 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.343541149 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.328186387 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.305082309 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.308504719 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.306123247 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.305330323 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009699378 seconds Ending run at 05:39:36 UTC on 2022-04-12. Run time = 3.496152192 Run time without initialization = 3.278044553 Average number of zones advanced per microsecond: 0.800 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.496 ... 3.496 ... 3.496 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2200 2.2777 2.3278 66.58% Gravity::make_radial_gravity() 21 0.3448 0.3578 0.3711 10.61% Castro::initData() 1 0.04691 0.09256 0.1484 4.24% Castro::estTimeStep() 21 0.01871 0.08841 0.1424 4.07% MultiFab::min() 10 0.01089 0.06601 0.1271 3.64% FabArray::setVal() 143 0.06424 0.07179 0.08322 2.38% FabArray::ParallelCopy_finish() 41 0.03594 0.05168 0.08183 2.34% Castro::reset_internal_energy() 63 0.04994 0.05185 0.05387 1.54% StateData::FillBoundary(geom) 41 0.04054 0.04377 0.04702 1.35% Castro::normalize_species() 62 0.044 0.04516 0.04622 1.32% FabArray::ParallelCopy_nowait() 41 0.03782 0.04383 0.04544 1.30% FillPatchIterator::Initialize 41 0.02451 0.03116 0.0351 1.00% Gravity::interpolate_monopole_grav() 21 0.02845 0.02908 0.03085 0.88% Castro::construct_new_gravity_source() 10 0.02211 0.02483 0.02874 0.82% Castro::do_advance_ctu() 10 0.01869 0.02147 0.02497 0.71% Castro::computeTemp() 63 0.01935 0.01996 0.02099 0.60% Castro::expand_state() 10 0.01316 0.01803 0.02042 0.58% Castro::initialize_do_advance() 10 0.01094 0.01638 0.01863 0.53% MultiFab::Saxpy() 20 0.01358 0.01555 0.0165 0.47% VisMF::Write(FabArray) 2 0.01246 0.01298 0.01508 0.43% Gravity::get_new_grav_vector() 11 0.009425 0.01196 0.01465 0.42% Castro::initialize_advance() 10 0.008715 0.01104 0.01354 0.39% MultiFab::contains_nan() 20 0.01072 0.01155 0.01255 0.36% FabArray::setDomainBndry() 41 0.007073 0.01063 0.01193 0.34% Castro::construct_old_gravity_source() 10 0.008132 0.01095 0.01164 0.33% Amr::writePlotFile() 2 0.008672 0.01089 0.01133 0.32% Amr::defBaseLevel() 1 0.006564 0.008613 0.01098 0.31% Gravity::get_old_grav_vector() 10 0.007803 0.009872 0.01075 0.31% Castro::enforce_min_density() 62 0.006693 0.007017 0.00734 0.21% StateData::define() 4 0.004316 0.005567 0.007067 0.20% Castro::construct_new_source() 50 0.006161 0.006716 0.006998 0.20% main() 1 0.003635 0.003901 0.004033 0.12% Castro::swap_state_time_levels() 10 0.002856 0.003623 0.003854 0.11% Castro::finalize_do_advance() 10 0.0004771 0.0008665 0.001039 0.03% Amr::coarseTimeStep() 10 0.0003381 0.0005581 0.0009047 0.03% Amr::InitAmr() 1 0.0002549 0.0003864 0.000508 0.01% Amr::timeStep() 10 0.0001799 0.0002381 0.000484 0.01% DistributionMapping::LeastUsedCPUs() 1 8.197e-06 0.0001678 0.000329 0.01% StateDataPhysBCFunct::() 41 0.0001317 0.0001522 0.0001978 0.01% Castro::clean_state() 62 0.0001344 0.0001528 0.0001761 0.01% FabArray::ParallelCopy() 41 7.705e-05 9.269e-05 0.0001197 0.00% Castro::enforce_consistent_e() 1 8.905e-05 0.0001015 0.0001184 0.00% Castro::construct_old_source() 50 6.994e-05 8.825e-05 0.0001055 0.00% FillPatchSingleLevel 41 6.439e-05 7.513e-05 8.834e-05 0.00% Castro::do_new_sources() 10 5.475e-05 7.488e-05 8.755e-05 0.00% FabArrayBase::getCPC() 41 5.178e-05 6.302e-05 8.404e-05 0.00% Castro::do_old_sources() 10 5.588e-05 7.151e-05 8.121e-05 0.00% Castro::subcycle_advance_ctu() 10 5.084e-05 5.946e-05 7.218e-05 0.00% Castro::construct_old_gravity() 10 5.603e-05 6.135e-05 6.766e-05 0.00% Castro::construct_new_gravity() 10 4.667e-05 5.543e-05 6.599e-05 0.00% Amr::FinalizeInit() 1 4.319e-06 1.28e-05 6.502e-05 0.00% Castro::apply_source_to_state() 20 4.756e-05 5.475e-05 6.368e-05 0.00% Amr::writeSmallPlotFile() 1 2.515e-05 5.331e-05 6.071e-05 0.00% Castro::advance() 10 4.202e-05 4.677e-05 6.033e-05 0.00% Castro::finalize_advance() 10 5.393e-05 5.577e-05 6.013e-05 0.00% Castro::enforce_speed_limit() 62 3.248e-05 3.538e-05 4.147e-05 0.00% FabArrayBase::CPC::define() 2 2.212e-05 2.937e-05 3.529e-05 0.00% Castro::check_for_nan() 20 2.636e-05 3.107e-05 3.334e-05 0.00% Amr::initSubcycle() 1 8.528e-06 1.467e-05 2.879e-05 0.00% Castro::create_source_corrector() 10 1.754e-05 2.015e-05 2.586e-05 0.00% Castro::post_timestep() 10 1.77e-05 1.966e-05 2.342e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.172e-05 1.522e-05 2.062e-05 0.00% Gravity::swapTimeLevels() 10 1.217e-05 1.423e-05 1.6e-05 0.00% Gravity::set_mass_offset() 10 9.456e-06 1.078e-05 1.3e-05 0.00% Castro::computeNewDt() 9 8.976e-06 1.081e-05 1.209e-05 0.00% Castro::post_init() 1 4.383e-06 5.861e-06 1.006e-05 0.00% Castro::retry_advance_ctu() 10 6.302e-06 7.863e-06 8.9e-06 0.00% Castro::FluxRegFineAdd() 10 7.753e-06 8.221e-06 8.604e-06 0.00% Amr::InitializeInit() 1 2.112e-06 3.487e-06 6.653e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.858e-06 4.872e-06 6.289e-06 0.00% Castro::post_regrid() 1 2.01e-06 3.01e-06 4.533e-06 0.00% Castro::computeInitialDt() 2 3.25e-06 4.114e-06 4.498e-06 0.00% Amr::init() 1 2.14e-06 2.484e-06 3.463e-06 0.00% Amr::initialInit() 1 1.34e-06 1.7e-06 2.104e-06 0.00% DistributionMapping::Distribute() 1 9.21e-07 1.321e-06 1.649e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.496 3.496 3.496 100.00% Amr::coarseTimeStep() 10 3.264 3.264 3.264 93.37% Amr::timeStep() 10 3.255 3.255 3.256 93.12% Castro::advance() 10 3.238 3.239 3.239 92.64% Castro::subcycle_advance_ctu() 10 3.155 3.164 3.17 90.66% Castro::do_advance_ctu() 10 3.155 3.164 3.17 90.66% Castro::construct_ctu_hydro_source() 10 2.22 2.278 2.328 66.58% Gravity::make_radial_gravity() 21 0.3448 0.3578 0.3711 10.61% Gravity::get_new_grav_vector() 11 0.2365 0.2372 0.2381 6.81% Castro::construct_old_gravity() 10 0.2063 0.2163 0.2266 6.48% Gravity::get_old_grav_vector() 10 0.205 0.2154 0.2259 6.46% Amr::init() 1 0.2174 0.2176 0.2177 6.23% Castro::construct_new_gravity() 10 0.2093 0.2098 0.2106 6.02% Amr::initialInit() 1 0.2032 0.2034 0.2036 5.82% FillPatchIterator::Initialize 41 0.171 0.1815 0.1923 5.50% Amr::InitializeInit() 1 0.06499 0.1128 0.1725 4.93% Amr::defBaseLevel() 1 0.06499 0.1128 0.1725 4.93% Castro::initialize_do_advance() 10 0.1559 0.1646 0.1721 4.92% FillPatchSingleLevel 41 0.1245 0.1397 0.1607 4.60% Castro::initData() 1 0.05094 0.09657 0.1524 4.36% Castro::estTimeStep() 21 0.01871 0.08841 0.1424 4.07% Amr::FinalizeInit() 1 0.03075 0.09063 0.1386 3.96% MultiFab::min() 10 0.01089 0.06601 0.1271 3.64% Castro::clean_state() 62 0.1213 0.1232 0.1267 3.62% Castro::expand_state() 10 0.1064 0.1157 0.1236 3.53% FabArray::ParallelCopy() 41 0.08157 0.09569 0.1199 3.43% Castro::computeInitialDt() 2 0.001744 0.06156 0.1094 3.13% Castro::initialize_advance() 10 0.06891 0.07483 0.08324 2.38% FabArray::setVal() 143 0.06424 0.07179 0.08322 2.38% FabArray::ParallelCopy_finish() 41 0.03594 0.05168 0.08183 2.34% Castro::do_new_sources() 10 0.06194 0.06805 0.07751 2.22% Castro::computeTemp() 63 0.06933 0.07181 0.0748 2.14% Castro::reset_internal_energy() 63 0.04994 0.05185 0.05387 1.54% Castro::do_old_sources() 10 0.0424 0.04747 0.04907 1.40% StateDataPhysBCFunct::() 41 0.04074 0.04392 0.04718 1.35% StateData::FillBoundary(geom) 41 0.04054 0.04377 0.04702 1.35% Castro::normalize_species() 62 0.044 0.04516 0.04622 1.32% FabArray::ParallelCopy_nowait() 41 0.03794 0.04392 0.04554 1.30% Castro::construct_new_source() 50 0.02874 0.03154 0.03569 1.02% Gravity::interpolate_monopole_grav() 21 0.02845 0.02908 0.03085 0.88% Castro::construct_new_gravity_source() 10 0.02211 0.02483 0.02874 0.82% Castro::post_init() 1 0.02811 0.02826 0.02838 0.81% Amr::writePlotFile() 2 0.02372 0.02387 0.02403 0.69% Castro::post_timestep() 10 0.01609 0.01642 0.01665 0.48% Castro::apply_source_to_state() 20 0.01364 0.01561 0.01654 0.47% MultiFab::Saxpy() 20 0.01358 0.01555 0.0165 0.47% VisMF::Write(FabArray) 2 0.01246 0.01298 0.01508 0.43% Castro::check_for_nan() 20 0.01075 0.01158 0.01258 0.36% MultiFab::contains_nan() 20 0.01072 0.01155 0.01255 0.36% FabArray::setDomainBndry() 41 0.007073 0.01063 0.01193 0.34% Castro::construct_old_source() 50 0.008202 0.01104 0.01174 0.34% Castro::construct_old_gravity_source() 10 0.008132 0.01095 0.01164 0.33% Castro::computeNewDt() 9 0.007066 0.007566 0.008 0.23% Castro::enforce_min_density() 62 0.006693 0.007017 0.00734 0.21% AmrLevel::AmrLevel(dm) 1 0.00433 0.005582 0.007082 0.20% StateData::define() 4 0.004316 0.005567 0.007067 0.20% Castro::swap_state_time_levels() 10 0.002856 0.003623 0.003854 0.11% Castro::post_regrid() 1 0.00166 0.00173 0.001801 0.05% Castro::finalize_do_advance() 10 0.0004771 0.0008665 0.001039 0.03% Amr::InitAmr() 1 0.0002634 0.0004011 0.0005362 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.468e-05 0.000174 0.0003357 0.01% DistributionMapping::LeastUsedCPUs() 1 8.197e-06 0.0001678 0.000329 0.01% Castro::enforce_consistent_e() 1 8.905e-05 0.0001015 0.0001184 0.00% FabArrayBase::getCPC() 41 8.085e-05 9.239e-05 0.000116 0.00% Castro::finalize_advance() 10 6.253e-05 6.399e-05 6.831e-05 0.00% Amr::writeSmallPlotFile() 1 2.515e-05 5.331e-05 6.071e-05 0.00% Castro::enforce_speed_limit() 62 3.248e-05 3.538e-05 4.147e-05 0.00% FabArrayBase::CPC::define() 2 2.212e-05 2.937e-05 3.529e-05 0.00% Amr::initSubcycle() 1 8.528e-06 1.467e-05 2.879e-05 0.00% Castro::create_source_corrector() 10 1.754e-05 2.015e-05 2.586e-05 0.00% Gravity::swapTimeLevels() 10 1.217e-05 1.423e-05 1.6e-05 0.00% Gravity::set_mass_offset() 10 9.456e-06 1.078e-05 1.3e-05 0.00% Castro::retry_advance_ctu() 10 6.302e-06 7.863e-06 8.9e-06 0.00% Castro::FluxRegFineAdd() 10 7.753e-06 8.221e-06 8.604e-06 0.00% DistributionMapping::Distribute() 1 9.21e-07 1.321e-06 1.649e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-18-ga537fb0516d5) finalized