MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-18-ga537fb0516d5) initialized Starting run at 05:36:55 UTC on 2022-04-13. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-18-ga537fb051 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012860208 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.336174453 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331321401 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312748249 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311006602 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.313162262 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.339431616 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.303755659 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.300525757 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294512385 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294556447 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009344397 seconds Ending run at 05:36:58 UTC on 2022-04-13. Run time = 3.344838245 Run time without initialization = 3.149486341 Average number of zones advanced per microsecond: 0.832 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.344 ... 3.345 ... 3.345 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1357 2.1814 2.2305 66.68% Gravity::make_radial_gravity() 21 0.3413 0.3545 0.3744 11.19% Castro::initData() 1 0.03765 0.08661 0.1347 4.03% Castro::estTimeStep() 21 0.02712 0.07499 0.1217 3.64% MultiFab::min() 10 0.01303 0.06596 0.1147 3.43% FabArray::ParallelCopy_finish() 41 0.0327 0.04613 0.0963 2.88% FabArray::setVal() 143 0.05199 0.06637 0.07228 2.16% Castro::reset_internal_energy() 63 0.04965 0.05046 0.05145 1.54% StateData::FillBoundary(geom) 41 0.03755 0.04171 0.04545 1.36% Castro::normalize_species() 62 0.04312 0.0443 0.04528 1.35% FabArray::ParallelCopy_nowait() 41 0.03365 0.04086 0.0432 1.29% FillPatchIterator::Initialize 41 0.02247 0.03035 0.03344 1.00% Gravity::interpolate_monopole_grav() 21 0.02778 0.02812 0.02908 0.87% Castro::construct_new_gravity_source() 10 0.02033 0.02375 0.02598 0.78% Castro::do_advance_ctu() 10 0.01396 0.0194 0.0246 0.74% Castro::expand_state() 10 0.01113 0.01816 0.02059 0.62% Castro::computeTemp() 63 0.01831 0.01893 0.01971 0.59% Castro::initialize_do_advance() 10 0.01003 0.01581 0.01759 0.53% MultiFab::Saxpy() 20 0.01305 0.01474 0.01592 0.48% VisMF::Write(FabArray) 2 0.01093 0.01203 0.01438 0.43% Castro::initialize_advance() 10 0.003816 0.01029 0.01307 0.39% Gravity::get_new_grav_vector() 11 0.009285 0.01096 0.01301 0.39% MultiFab::contains_nan() 20 0.009965 0.01107 0.01277 0.38% Castro::construct_old_gravity_source() 10 0.007379 0.01108 0.01192 0.36% FabArray::setDomainBndry() 41 0.006517 0.01016 0.01157 0.35% Amr::writePlotFile() 2 0.008041 0.0105 0.01156 0.35% Gravity::get_old_grav_vector() 10 0.006773 0.009029 0.01039 0.31% Amr::defBaseLevel() 1 0.006336 0.007701 0.009821 0.29% Castro::enforce_min_density() 62 0.006503 0.00683 0.007103 0.21% Castro::construct_new_source() 50 0.005755 0.006435 0.006743 0.20% StateData::define() 4 0.00417 0.00497 0.006221 0.19% main() 1 0.003335 0.003832 0.004131 0.12% Castro::swap_state_time_levels() 10 0.00244 0.003479 0.004108 0.12% Amr::coarseTimeStep() 10 0.0003741 0.0007581 0.001597 0.05% Castro::finalize_do_advance() 10 0.0004666 0.0008134 0.0009651 0.03% Amr::InitAmr() 1 0.0002725 0.0003512 0.0005611 0.02% Amr::timeStep() 10 0.0001637 0.000226 0.0004712 0.01% DistributionMapping::LeastUsedCPUs() 1 8.445e-06 0.0002717 0.0003759 0.01% Castro::clean_state() 62 0.0001214 0.0001392 0.0001579 0.00% StateDataPhysBCFunct::() 41 0.000111 0.0001281 0.0001453 0.00% Castro::construct_old_source() 50 6.141e-05 8.107e-05 9.4e-05 0.00% Castro::enforce_consistent_e() 1 7.954e-05 8.612e-05 9.247e-05 0.00% FabArrayBase::getCPC() 41 4.925e-05 6.23e-05 8.89e-05 0.00% Amr::FinalizeInit() 1 3.457e-06 1.491e-05 8.843e-05 0.00% FabArray::ParallelCopy() 41 6.963e-05 7.692e-05 8.612e-05 0.00% Castro::construct_old_gravity() 10 5.325e-05 6.077e-05 8.113e-05 0.00% Castro::do_old_sources() 10 5.068e-05 6.494e-05 8.04e-05 0.00% Castro::subcycle_advance_ctu() 10 4.179e-05 5.702e-05 7.81e-05 0.00% FillPatchSingleLevel 41 5.606e-05 6.566e-05 7.599e-05 0.00% Amr::writeSmallPlotFile() 1 2.553e-05 5.293e-05 7.213e-05 0.00% Castro::do_new_sources() 10 5.297e-05 6.358e-05 7.111e-05 0.00% Castro::construct_new_gravity() 10 4.032e-05 5.003e-05 6.565e-05 0.00% Castro::apply_source_to_state() 20 3.995e-05 4.943e-05 6.328e-05 0.00% Castro::finalize_advance() 10 4.895e-05 5.166e-05 5.719e-05 0.00% Castro::advance() 10 3.932e-05 4.355e-05 5.674e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.771e-05 4.055e-05 0.00% Castro::enforce_speed_limit() 62 2.839e-05 3.315e-05 3.959e-05 0.00% Castro::check_for_nan() 20 2.184e-05 2.512e-05 3.024e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.389e-05 1.719e-05 2.253e-05 0.00% Castro::create_source_corrector() 10 1.394e-05 1.665e-05 2.138e-05 0.00% Gravity::swapTimeLevels() 10 9.186e-06 1.249e-05 1.555e-05 0.00% Amr::initSubcycle() 1 9.238e-06 1.102e-05 1.53e-05 0.00% Amr::init() 1 2.051e-06 3.566e-06 1.293e-05 0.00% Castro::post_timestep() 10 8.9e-06 9.794e-06 1.089e-05 0.00% Castro::computeNewDt() 9 7.129e-06 8.103e-06 9.585e-06 0.00% Gravity::set_mass_offset() 10 7.19e-06 8.248e-06 9.338e-06 0.00% Amr::InitializeInit() 1 2.294e-06 4.223e-06 9.333e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.089e-06 5.187e-06 9.222e-06 0.00% Castro::FluxRegFineAdd() 10 5.489e-06 6.69e-06 8.091e-06 0.00% Castro::retry_advance_ctu() 10 5.272e-06 5.882e-06 6.283e-06 0.00% Castro::post_regrid() 1 1.83e-06 2.941e-06 6.203e-06 0.00% Castro::computeInitialDt() 2 3.168e-06 3.749e-06 4.294e-06 0.00% Castro::post_init() 1 3.324e-06 3.729e-06 4.194e-06 0.00% Amr::initialInit() 1 1.124e-06 1.421e-06 1.76e-06 0.00% DistributionMapping::Distribute() 1 1.063e-06 1.209e-06 1.47e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.344 3.345 3.345 100.00% Amr::coarseTimeStep() 10 3.136 3.136 3.136 93.76% Amr::timeStep() 10 3.125 3.126 3.127 93.48% Castro::advance() 10 3.109 3.109 3.11 92.96% Castro::subcycle_advance_ctu() 10 3.036 3.04 3.059 91.44% Castro::do_advance_ctu() 10 3.036 3.04 3.059 91.44% Castro::construct_ctu_hydro_source() 10 2.136 2.181 2.23 66.68% Gravity::make_radial_gravity() 21 0.3413 0.3545 0.3744 11.19% Castro::construct_old_gravity() 10 0.2043 0.2137 0.2306 6.89% Gravity::get_old_grav_vector() 10 0.2034 0.2129 0.23 6.87% Gravity::get_new_grav_vector() 11 0.2237 0.2259 0.2272 6.79% Castro::construct_new_gravity() 10 0.1997 0.2008 0.202 6.04% FillPatchIterator::Initialize 41 0.1598 0.1696 0.1969 5.89% Amr::init() 1 0.1946 0.1949 0.195 5.83% Amr::initialInit() 1 0.1814 0.1817 0.182 5.44% FillPatchSingleLevel 41 0.1204 0.1291 0.1679 5.02% Castro::initialize_do_advance() 10 0.1544 0.1597 0.1658 4.96% Amr::InitializeInit() 1 0.05382 0.1055 0.1532 4.58% Amr::defBaseLevel() 1 0.05382 0.1055 0.1532 4.58% Castro::initData() 1 0.04162 0.09053 0.1386 4.14% FabArray::ParallelCopy() 41 0.07595 0.08715 0.1302 3.89% Amr::FinalizeInit() 1 0.02861 0.07625 0.1281 3.83% Castro::expand_state() 10 0.107 0.1121 0.1251 3.74% Castro::estTimeStep() 21 0.02712 0.07499 0.1217 3.64% Castro::clean_state() 62 0.1178 0.1197 0.1216 3.63% MultiFab::min() 10 0.01303 0.06596 0.1147 3.43% Castro::computeInitialDt() 2 0.00173 0.0494 0.1011 3.02% FabArray::ParallelCopy_finish() 41 0.0327 0.04613 0.0963 2.88% Castro::initialize_advance() 10 0.05035 0.06937 0.07351 2.20% FabArray::setVal() 143 0.05199 0.06637 0.07228 2.16% Castro::computeTemp() 63 0.06842 0.06939 0.07033 2.10% Castro::do_new_sources() 10 0.05803 0.0633 0.06774 2.03% Castro::reset_internal_energy() 63 0.04965 0.05046 0.05145 1.54% Castro::do_old_sources() 10 0.04138 0.04733 0.04864 1.45% StateDataPhysBCFunct::() 41 0.03768 0.04184 0.04557 1.36% StateData::FillBoundary(geom) 41 0.03755 0.04171 0.04545 1.36% Castro::normalize_species() 62 0.04312 0.0443 0.04528 1.35% FabArray::ParallelCopy_nowait() 41 0.03378 0.04095 0.04328 1.29% Castro::construct_new_source() 50 0.02609 0.03018 0.03267 0.98% Gravity::interpolate_monopole_grav() 21 0.02778 0.02812 0.02908 0.87% Castro::post_init() 1 0.02593 0.02613 0.02626 0.78% Castro::construct_new_gravity_source() 10 0.02033 0.02375 0.02598 0.78% Amr::writePlotFile() 2 0.02234 0.02253 0.02275 0.68% Castro::post_timestep() 10 0.01571 0.01628 0.01732 0.52% Castro::apply_source_to_state() 20 0.01309 0.01479 0.01597 0.48% MultiFab::Saxpy() 20 0.01305 0.01474 0.01592 0.48% VisMF::Write(FabArray) 2 0.01093 0.01203 0.01438 0.43% Castro::check_for_nan() 20 0.00999 0.01109 0.0128 0.38% MultiFab::contains_nan() 20 0.009965 0.01107 0.01277 0.38% Castro::construct_old_source() 50 0.00744 0.01116 0.01201 0.36% Castro::construct_old_gravity_source() 10 0.007379 0.01108 0.01192 0.36% FabArray::setDomainBndry() 41 0.006517 0.01016 0.01157 0.35% Castro::computeNewDt() 9 0.007142 0.008516 0.009242 0.28% Castro::enforce_min_density() 62 0.006503 0.00683 0.007103 0.21% AmrLevel::AmrLevel(dm) 1 0.004184 0.004987 0.006244 0.19% StateData::define() 4 0.00417 0.00497 0.006221 0.19% Castro::swap_state_time_levels() 10 0.00244 0.003479 0.004108 0.12% Castro::post_regrid() 1 0.001539 0.001624 0.001858 0.06% Castro::finalize_do_advance() 10 0.0004666 0.0008134 0.0009651 0.03% Amr::InitAmr() 1 0.0002817 0.0003622 0.0005759 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.397e-05 0.0002781 0.0003833 0.01% DistributionMapping::LeastUsedCPUs() 1 8.445e-06 0.0002717 0.0003759 0.01% FabArrayBase::getCPC() 41 7.54e-05 9.001e-05 0.0001259 0.00% Castro::enforce_consistent_e() 1 7.954e-05 8.612e-05 9.247e-05 0.00% Amr::writeSmallPlotFile() 1 2.553e-05 5.293e-05 7.213e-05 0.00% Castro::finalize_advance() 10 5.546e-05 5.835e-05 6.431e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.771e-05 4.055e-05 0.00% Castro::enforce_speed_limit() 62 2.839e-05 3.315e-05 3.959e-05 0.00% Castro::create_source_corrector() 10 1.394e-05 1.665e-05 2.138e-05 0.00% Gravity::swapTimeLevels() 10 9.186e-06 1.249e-05 1.555e-05 0.00% Amr::initSubcycle() 1 9.238e-06 1.102e-05 1.53e-05 0.00% Gravity::set_mass_offset() 10 7.19e-06 8.248e-06 9.338e-06 0.00% Castro::FluxRegFineAdd() 10 5.489e-06 6.69e-06 8.091e-06 0.00% Castro::retry_advance_ctu() 10 5.272e-06 5.882e-06 6.283e-06 0.00% DistributionMapping::Distribute() 1 1.063e-06 1.209e-06 1.47e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-18-ga537fb0516d5) finalized