MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-18-ga537fb0516d5) initialized Starting run at 05:37:00 UTC on 2022-04-14. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-18-ga537fb051 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014332456 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.342899735 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344846248 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.329349645 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314665106 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314278303 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.33570941 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296184986 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29060749 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291025181 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289731072 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009533195 seconds Ending run at 05:37:03 UTC on 2022-04-14. Run time = 3.396997286 Run time without initialization = 3.161625701 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.397 ... 3.397 ... 3.397 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1451 2.1821 2.2221 65.41% Gravity::make_radial_gravity() 21 0.3575 0.3677 0.3744 11.02% Castro::estTimeStep() 21 0.02793 0.09834 0.1552 4.57% Castro::initData() 1 0.0376 0.08775 0.1545 4.55% MultiFab::min() 10 0.008134 0.04955 0.08966 2.64% FabArray::setVal() 143 0.06988 0.0742 0.08235 2.42% FabArray::ParallelCopy_finish() 41 0.03641 0.04853 0.0562 1.65% Castro::reset_internal_energy() 63 0.0485 0.05078 0.05394 1.59% Castro::normalize_species() 62 0.04333 0.04453 0.04611 1.36% StateData::FillBoundary(geom) 41 0.03952 0.04162 0.04411 1.30% FabArray::ParallelCopy_nowait() 41 0.04048 0.04241 0.04388 1.29% FillPatchIterator::Initialize 41 0.02526 0.03194 0.03515 1.03% Castro::construct_new_gravity_source() 10 0.02258 0.02486 0.02949 0.87% Gravity::interpolate_monopole_grav() 21 0.02756 0.02835 0.02949 0.87% Castro::do_advance_ctu() 10 0.01727 0.02094 0.02336 0.69% Castro::expand_state() 10 0.01499 0.0196 0.0224 0.66% Castro::computeTemp() 63 0.01817 0.0193 0.02143 0.63% Castro::initialize_do_advance() 10 0.0164 0.01765 0.01937 0.57% MultiFab::Saxpy() 20 0.01528 0.01583 0.01683 0.50% Castro::initialize_advance() 10 0.01072 0.01262 0.01498 0.44% MultiFab::contains_nan() 20 0.0107 0.01175 0.01467 0.43% VisMF::Write(FabArray) 2 0.01134 0.01188 0.01433 0.42% Amr::writePlotFile() 2 0.009813 0.01291 0.01416 0.42% Castro::construct_old_gravity_source() 10 0.01012 0.01159 0.01308 0.38% Gravity::get_new_grav_vector() 11 0.01071 0.01152 0.01291 0.38% FabArray::setDomainBndry() 41 0.00837 0.01059 0.01174 0.35% Gravity::get_old_grav_vector() 10 0.009032 0.00985 0.01124 0.33% Amr::defBaseLevel() 1 0.006597 0.007778 0.0105 0.31% Castro::enforce_min_density() 62 0.006771 0.00698 0.007131 0.21% Castro::construct_new_source() 50 0.006343 0.006623 0.006949 0.20% StateData::define() 4 0.004397 0.004961 0.006397 0.19% Castro::swap_state_time_levels() 10 0.002922 0.003775 0.004227 0.12% main() 1 0.003594 0.003826 0.004021 0.12% Amr::coarseTimeStep() 10 0.0004378 0.0009384 0.001825 0.05% Castro::finalize_do_advance() 10 0.0008249 0.00108 0.001227 0.04% Amr::InitAmr() 1 0.0002897 0.0003449 0.0005702 0.02% Amr::timeStep() 10 0.0001775 0.0002425 0.0005492 0.02% DistributionMapping::LeastUsedCPUs() 1 9.751e-06 0.0002911 0.0003595 0.01% Castro::clean_state() 62 0.0001253 0.0001326 0.0001409 0.00% Castro::enforce_consistent_e() 1 8.356e-05 0.0001016 0.0001407 0.00% StateDataPhysBCFunct::() 41 0.0001029 0.000125 0.0001335 0.00% FabArray::ParallelCopy() 41 6.329e-05 7.283e-05 8.554e-05 0.00% Amr::FinalizeInit() 1 4.52e-06 1.463e-05 7.955e-05 0.00% Castro::construct_old_source() 50 6.231e-05 7.103e-05 7.924e-05 0.00% Castro::do_new_sources() 10 5.103e-05 6.317e-05 7.418e-05 0.00% FillPatchSingleLevel 41 5.677e-05 6.35e-05 7.276e-05 0.00% Castro::construct_old_gravity() 10 4.632e-05 5.429e-05 7.056e-05 0.00% Amr::writeSmallPlotFile() 1 3.429e-05 5.461e-05 6.662e-05 0.00% Castro::subcycle_advance_ctu() 10 3.721e-05 5.564e-05 6.595e-05 0.00% Castro::do_old_sources() 10 4.988e-05 5.796e-05 6.371e-05 0.00% FabArrayBase::getCPC() 41 4.154e-05 5.172e-05 6.187e-05 0.00% Castro::finalize_advance() 10 5.12e-05 5.553e-05 6.183e-05 0.00% Castro::construct_new_gravity() 10 4.314e-05 4.621e-05 5.225e-05 0.00% Castro::apply_source_to_state() 20 3.915e-05 4.509e-05 5.052e-05 0.00% Castro::advance() 10 3.421e-05 3.897e-05 4.457e-05 0.00% Castro::create_source_corrector() 10 1.356e-05 1.941e-05 3.926e-05 0.00% Castro::enforce_speed_limit() 62 2.59e-05 3.144e-05 3.528e-05 0.00% FabArrayBase::CPC::define() 2 2.167e-05 2.792e-05 3.501e-05 0.00% Castro::check_for_nan() 20 2.234e-05 2.589e-05 3.012e-05 0.00% Gravity::swapTimeLevels() 10 1.016e-05 1.448e-05 2.477e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.259e-05 1.708e-05 2.246e-05 0.00% Amr::initSubcycle() 1 8.861e-06 1.097e-05 1.643e-05 0.00% Castro::computeNewDt() 9 7.337e-06 8.96e-06 1.473e-05 0.00% Castro::post_init() 1 4.308e-06 7.59e-06 1.324e-05 0.00% Castro::post_timestep() 10 8.164e-06 9.12e-06 9.766e-06 0.00% Gravity::set_mass_offset() 10 7.948e-06 8.55e-06 9.035e-06 0.00% Amr::InitializeInit() 1 2.008e-06 3.415e-06 8.817e-06 0.00% Castro::FluxRegFineAdd() 10 5.316e-06 6.25e-06 7.938e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.744e-06 5.541e-06 7.925e-06 0.00% Castro::retry_advance_ctu() 10 4.839e-06 6.008e-06 6.538e-06 0.00% Castro::computeInitialDt() 2 3.988e-06 4.51e-06 5.446e-06 0.00% Castro::post_regrid() 1 2.295e-06 3.151e-06 4.92e-06 0.00% Amr::init() 1 2.074e-06 2.31e-06 2.66e-06 0.00% Amr::initialInit() 1 1.355e-06 1.615e-06 1.924e-06 0.00% DistributionMapping::Distribute() 1 9.13e-07 1.181e-06 1.558e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.397 3.397 3.397 100.00% Amr::coarseTimeStep() 10 3.148 3.148 3.148 92.67% Amr::timeStep() 10 3.137 3.138 3.138 92.39% Castro::advance() 10 3.121 3.121 3.121 91.89% Castro::subcycle_advance_ctu() 10 3.039 3.044 3.048 89.73% Castro::do_advance_ctu() 10 3.039 3.044 3.048 89.72% Castro::construct_ctu_hydro_source() 10 2.145 2.182 2.222 65.41% Gravity::make_radial_gravity() 21 0.3575 0.3677 0.3744 11.02% Gravity::get_new_grav_vector() 11 0.2346 0.2355 0.2363 6.96% Amr::init() 1 0.2346 0.2349 0.2349 6.92% Castro::construct_old_gravity() 10 0.2154 0.2233 0.2294 6.75% Gravity::get_old_grav_vector() 10 0.2146 0.2224 0.2286 6.73% Amr::initialInit() 1 0.219 0.2197 0.2205 6.49% Castro::construct_new_gravity() 10 0.1977 0.1985 0.199 5.86% FillPatchIterator::Initialize 41 0.1652 0.1754 0.1884 5.55% Amr::InitializeInit() 1 0.05523 0.1074 0.1786 5.26% Amr::defBaseLevel() 1 0.05523 0.1073 0.1786 5.26% Castro::initialize_do_advance() 10 0.156 0.1623 0.168 4.94% Amr::FinalizeInit() 1 0.0419 0.1124 0.1638 4.82% Castro::initData() 1 0.04156 0.09215 0.1598 4.70% Castro::estTimeStep() 21 0.02793 0.09834 0.1552 4.57% FillPatchSingleLevel 41 0.1208 0.1329 0.1424 4.19% Castro::clean_state() 62 0.1165 0.1207 0.1258 3.70% Castro::computeInitialDt() 2 0.00212 0.0735 0.1257 3.70% Castro::expand_state() 10 0.1052 0.112 0.1186 3.49% FabArray::ParallelCopy() 41 0.08043 0.0911 0.09805 2.89% MultiFab::min() 10 0.008134 0.04955 0.08966 2.64% FabArray::setVal() 143 0.06988 0.0742 0.08235 2.42% Castro::initialize_advance() 10 0.07324 0.07678 0.08221 2.42% Castro::computeTemp() 63 0.06681 0.07007 0.07537 2.22% Castro::do_new_sources() 10 0.06167 0.0657 0.07336 2.16% FabArray::ParallelCopy_finish() 41 0.03641 0.04853 0.0562 1.65% Castro::do_old_sources() 10 0.04632 0.04995 0.05485 1.61% Castro::reset_internal_energy() 63 0.0485 0.05078 0.05394 1.59% Castro::normalize_species() 62 0.04333 0.04453 0.04611 1.36% StateDataPhysBCFunct::() 41 0.03966 0.04175 0.04424 1.30% StateData::FillBoundary(geom) 41 0.03952 0.04162 0.04411 1.30% FabArray::ParallelCopy_nowait() 41 0.04057 0.04249 0.04395 1.29% Castro::post_init() 1 0.03751 0.03794 0.03838 1.13% Castro::construct_new_source() 50 0.02893 0.03148 0.03644 1.07% Castro::construct_new_gravity_source() 10 0.02258 0.02486 0.02949 0.87% Gravity::interpolate_monopole_grav() 21 0.02756 0.02835 0.02949 0.87% Amr::writePlotFile() 2 0.02388 0.0248 0.02557 0.75% Castro::post_timestep() 10 0.01578 0.01623 0.01691 0.50% Castro::apply_source_to_state() 20 0.01533 0.01587 0.01688 0.50% MultiFab::Saxpy() 20 0.01528 0.01583 0.01683 0.50% Castro::check_for_nan() 20 0.01073 0.01177 0.0147 0.43% MultiFab::contains_nan() 20 0.0107 0.01175 0.01467 0.43% VisMF::Write(FabArray) 2 0.01134 0.01188 0.01433 0.42% Castro::construct_old_source() 50 0.01018 0.01166 0.01314 0.39% Castro::construct_old_gravity_source() 10 0.01012 0.01159 0.01308 0.38% FabArray::setDomainBndry() 41 0.00837 0.01059 0.01174 0.35% Castro::computeNewDt() 9 0.007279 0.008421 0.009502 0.28% Castro::enforce_min_density() 62 0.006771 0.00698 0.007131 0.21% AmrLevel::AmrLevel(dm) 1 0.004411 0.004978 0.006416 0.19% StateData::define() 4 0.004397 0.004961 0.006397 0.19% Castro::swap_state_time_levels() 10 0.002922 0.003775 0.004227 0.12% Castro::post_regrid() 1 0.001572 0.001926 0.002809 0.08% Castro::finalize_do_advance() 10 0.0008249 0.00108 0.001227 0.04% Amr::InitAmr() 1 0.0002988 0.0003559 0.0005854 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.577e-05 0.0002979 0.0003674 0.01% DistributionMapping::LeastUsedCPUs() 1 9.751e-06 0.0002911 0.0003595 0.01% Castro::enforce_consistent_e() 1 8.356e-05 0.0001016 0.0001407 0.00% FabArrayBase::getCPC() 41 6.629e-05 7.963e-05 9.436e-05 0.00% Castro::finalize_advance() 10 5.755e-05 6.178e-05 6.715e-05 0.00% Amr::writeSmallPlotFile() 1 3.429e-05 5.461e-05 6.662e-05 0.00% Castro::create_source_corrector() 10 1.356e-05 1.941e-05 3.926e-05 0.00% Castro::enforce_speed_limit() 62 2.59e-05 3.144e-05 3.528e-05 0.00% FabArrayBase::CPC::define() 2 2.167e-05 2.792e-05 3.501e-05 0.00% Gravity::swapTimeLevels() 10 1.016e-05 1.448e-05 2.477e-05 0.00% Amr::initSubcycle() 1 8.861e-06 1.097e-05 1.643e-05 0.00% Gravity::set_mass_offset() 10 7.948e-06 8.55e-06 9.035e-06 0.00% Castro::FluxRegFineAdd() 10 5.316e-06 6.25e-06 7.938e-06 0.00% Castro::retry_advance_ctu() 10 4.839e-06 6.008e-06 6.538e-06 0.00% DistributionMapping::Distribute() 1 9.13e-07 1.181e-06 1.558e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-18-ga537fb0516d5) finalized