MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-22-gf63c9cf37c54) initialized Starting run at 17:52:01 UTC on 2022-04-15. Successfully read inputs file ... Castro git describe: 22.04-8-gb7668d5aa AMReX git describe: 22.04-22-gf63c9cf37 Microphysics git describe: 22.04-2-g235d890b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013489668 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.344188271 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334626286 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.321321566 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.315026023 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315984944 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341593546 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298537817 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290896619 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291972941 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290765763 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009386194 seconds Ending run at 17:52:04 UTC on 2022-04-15. Run time = 3.340737745 Run time without initialization = 3.158281319 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.34 ... 3.341 ... 3.341 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1026 2.1757 2.2266 66.65% Gravity::make_radial_gravity() 21 0.3383 0.3546 0.3669 10.98% MultiFab::min() 10 0.02336 0.07852 0.1551 4.64% Castro::initData() 1 0.03766 0.0801 0.1197 3.58% Castro::estTimeStep() 21 0.02486 0.062 0.1083 3.24% FabArray::setVal() 143 0.06852 0.07361 0.07728 2.31% FabArray::ParallelCopy_finish() 41 0.0316 0.03965 0.05682 1.70% Castro::reset_internal_energy() 63 0.04811 0.04948 0.0518 1.55% StateData::FillBoundary(geom) 41 0.03679 0.04133 0.0465 1.39% Castro::normalize_species() 62 0.04313 0.044 0.04497 1.35% FabArray::ParallelCopy_nowait() 41 0.03963 0.04164 0.04355 1.30% FillPatchIterator::Initialize 41 0.02444 0.03153 0.03461 1.04% Gravity::interpolate_monopole_grav() 21 0.02778 0.02811 0.02895 0.87% Castro::construct_new_gravity_source() 10 0.0227 0.02468 0.02681 0.80% Castro::do_advance_ctu() 10 0.01635 0.02049 0.02397 0.72% Castro::expand_state() 10 0.01341 0.01832 0.02044 0.61% Castro::computeTemp() 63 0.01708 0.01851 0.02013 0.60% Castro::initialize_do_advance() 10 0.01077 0.01641 0.01853 0.55% MultiFab::Saxpy() 20 0.01453 0.01583 0.01684 0.50% VisMF::Write(FabArray) 2 0.01151 0.01208 0.01444 0.43% Castro::initialize_advance() 10 0.01051 0.01232 0.01426 0.43% Gravity::get_new_grav_vector() 11 0.01031 0.01151 0.01323 0.40% MultiFab::contains_nan() 20 0.01044 0.01132 0.013 0.39% Castro::construct_old_gravity_source() 10 0.009399 0.0117 0.01274 0.38% FabArray::setDomainBndry() 41 0.007184 0.01038 0.01173 0.35% Amr::writePlotFile() 2 0.008683 0.01088 0.0115 0.34% Gravity::get_old_grav_vector() 10 0.007816 0.009318 0.01055 0.32% Amr::defBaseLevel() 1 0.006583 0.007031 0.007678 0.23% Castro::enforce_min_density() 62 0.006595 0.006887 0.007365 0.22% Castro::construct_new_source() 50 0.006428 0.006662 0.006952 0.21% StateData::define() 4 0.004332 0.004572 0.004806 0.14% Castro::swap_state_time_levels() 10 0.002927 0.003811 0.004284 0.13% main() 1 0.003561 0.003768 0.003964 0.12% Amr::coarseTimeStep() 10 0.000279 0.0008042 0.001492 0.04% Castro::finalize_do_advance() 10 0.000897 0.001122 0.00123 0.04% Amr::timeStep() 10 0.0001637 0.0002186 0.0004429 0.01% Amr::InitAmr() 1 0.0002595 0.0002891 0.0003727 0.01% Castro::clean_state() 62 0.0001278 0.0001412 0.0001671 0.01% StateDataPhysBCFunct::() 41 0.0001136 0.0001266 0.0001521 0.00% DistributionMapping::LeastUsedCPUs() 1 7.319e-06 8.423e-05 0.000122 0.00% Amr::FinalizeInit() 1 4.128e-06 1.701e-05 0.0001048 0.00% Castro::construct_old_source() 50 6.82e-05 8.349e-05 9.626e-05 0.00% Castro::enforce_consistent_e() 1 8.162e-05 8.734e-05 9.174e-05 0.00% FabArray::ParallelCopy() 41 6.537e-05 7.354e-05 8.535e-05 0.00% Castro::do_old_sources() 10 5.643e-05 6.498e-05 7.711e-05 0.00% FillPatchSingleLevel 41 6.249e-05 6.921e-05 7.523e-05 0.00% Amr::writeSmallPlotFile() 1 2.513e-05 4.825e-05 7.193e-05 0.00% Castro::do_new_sources() 10 6.052e-05 6.509e-05 7.122e-05 0.00% Castro::subcycle_advance_ctu() 10 4.101e-05 5.616e-05 6.987e-05 0.00% Castro::construct_old_gravity() 10 5.26e-05 6.067e-05 6.646e-05 0.00% FabArrayBase::getCPC() 41 4.408e-05 5.107e-05 5.891e-05 0.00% Castro::apply_source_to_state() 20 4.353e-05 5.178e-05 5.844e-05 0.00% Castro::construct_new_gravity() 10 3.929e-05 4.866e-05 5.654e-05 0.00% Castro::finalize_advance() 10 4.453e-05 4.918e-05 5.321e-05 0.00% Castro::advance() 10 3.689e-05 3.96e-05 4.109e-05 0.00% Castro::enforce_speed_limit() 62 3.003e-05 3.36e-05 3.714e-05 0.00% FabArrayBase::CPC::define() 2 1.964e-05 2.623e-05 3.433e-05 0.00% Castro::check_for_nan() 20 2.513e-05 2.724e-05 3.36e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.366e-05 1.887e-05 3.013e-05 0.00% Gravity::swapTimeLevels() 10 1.209e-05 1.634e-05 2.49e-05 0.00% Castro::create_source_corrector() 10 1.355e-05 1.654e-05 2.006e-05 0.00% Castro::post_timestep() 10 8.376e-06 9.265e-06 1.091e-05 0.00% Amr::initSubcycle() 1 8.471e-06 9.168e-06 9.788e-06 0.00% Castro::computeNewDt() 9 7.237e-06 7.941e-06 9.223e-06 0.00% Gravity::set_mass_offset() 10 6.719e-06 7.519e-06 9.184e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.758e-06 5.234e-06 8.541e-06 0.00% Amr::initialInit() 1 1.218e-06 2.246e-06 7.875e-06 0.00% Castro::FluxRegFineAdd() 10 5.891e-06 6.755e-06 7.453e-06 0.00% Castro::retry_advance_ctu() 10 4.959e-06 5.723e-06 6.628e-06 0.00% Amr::InitializeInit() 1 2.033e-06 3.558e-06 5.999e-06 0.00% Castro::post_init() 1 3.296e-06 3.941e-06 4.848e-06 0.00% Castro::computeInitialDt() 2 2.793e-06 3.64e-06 4.219e-06 0.00% Castro::post_regrid() 1 1.772e-06 2.903e-06 3.841e-06 0.00% Amr::init() 1 2.081e-06 2.344e-06 2.778e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.201e-06 1.414e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.34 3.341 3.341 100.00% Amr::coarseTimeStep() 10 3.145 3.145 3.145 94.14% Amr::timeStep() 10 3.135 3.136 3.137 93.89% Castro::advance() 10 3.12 3.12 3.12 93.39% Castro::subcycle_advance_ctu() 10 3.04 3.043 3.047 91.20% Castro::do_advance_ctu() 10 3.04 3.043 3.047 91.20% Castro::construct_ctu_hydro_source() 10 2.103 2.176 2.227 66.65% Gravity::make_radial_gravity() 21 0.3383 0.3546 0.3669 10.98% Gravity::get_new_grav_vector() 11 0.2256 0.2267 0.2274 6.81% Castro::construct_old_gravity() 10 0.2008 0.2142 0.2243 6.71% Gravity::get_old_grav_vector() 10 0.2 0.2134 0.2235 6.69% Castro::construct_new_gravity() 10 0.1997 0.2003 0.201 6.02% Amr::init() 1 0.1819 0.182 0.182 5.45% Amr::initialInit() 1 0.1683 0.1685 0.1687 5.05% FillPatchIterator::Initialize 41 0.1612 0.1649 0.1687 5.05% Castro::initialize_do_advance() 10 0.1443 0.1557 0.1624 4.86% MultiFab::min() 10 0.02336 0.07852 0.1551 4.64% Amr::InitializeInit() 1 0.05529 0.09843 0.1386 4.15% Amr::defBaseLevel() 1 0.05528 0.09843 0.1386 4.15% FillPatchSingleLevel 41 0.116 0.123 0.1336 4.00% Castro::initData() 1 0.04178 0.08415 0.1234 3.69% Castro::clean_state() 62 0.1156 0.1181 0.1224 3.66% Amr::FinalizeInit() 1 0.02989 0.07008 0.1133 3.39% Castro::expand_state() 10 0.1039 0.1078 0.113 3.38% Castro::estTimeStep() 21 0.02486 0.062 0.1083 3.24% FabArray::ParallelCopy() 41 0.07324 0.08144 0.09662 2.89% Castro::computeInitialDt() 2 0.001806 0.04196 0.08514 2.55% Castro::initialize_advance() 10 0.07285 0.07649 0.07966 2.38% FabArray::setVal() 143 0.06852 0.07361 0.07728 2.31% Castro::computeTemp() 63 0.06558 0.06799 0.07193 2.15% Castro::do_new_sources() 10 0.06176 0.06517 0.0691 2.07% FabArray::ParallelCopy_finish() 41 0.0316 0.03965 0.05682 1.70% Castro::reset_internal_energy() 63 0.04811 0.04948 0.0518 1.55% Castro::do_old_sources() 10 0.04698 0.04896 0.05016 1.50% StateDataPhysBCFunct::() 41 0.03691 0.04145 0.04665 1.40% StateData::FillBoundary(geom) 41 0.03679 0.04133 0.0465 1.39% Castro::normalize_species() 62 0.04313 0.044 0.04497 1.35% FabArray::ParallelCopy_nowait() 41 0.03972 0.04172 0.04362 1.31% Castro::construct_new_source() 50 0.02926 0.03134 0.03357 1.00% Gravity::interpolate_monopole_grav() 21 0.02778 0.02811 0.02895 0.87% Castro::post_init() 1 0.02725 0.02746 0.02764 0.83% Castro::construct_new_gravity_source() 10 0.0227 0.02468 0.02681 0.80% Amr::writePlotFile() 2 0.02273 0.02297 0.02313 0.69% Castro::apply_source_to_state() 20 0.01457 0.01588 0.01689 0.51% MultiFab::Saxpy() 20 0.01453 0.01583 0.01684 0.50% Castro::post_timestep() 10 0.01542 0.01594 0.01658 0.50% VisMF::Write(FabArray) 2 0.01151 0.01208 0.01444 0.43% Castro::check_for_nan() 20 0.01046 0.01135 0.01304 0.39% MultiFab::contains_nan() 20 0.01044 0.01132 0.013 0.39% Castro::construct_old_source() 50 0.009467 0.01178 0.01283 0.38% Castro::construct_old_gravity_source() 10 0.009399 0.0117 0.01274 0.38% FabArray::setDomainBndry() 41 0.007184 0.01038 0.01173 0.35% Castro::computeNewDt() 9 0.006808 0.007206 0.007412 0.22% Castro::enforce_min_density() 62 0.006595 0.006887 0.007365 0.22% AmrLevel::AmrLevel(dm) 1 0.004362 0.004591 0.00482 0.14% StateData::define() 4 0.004332 0.004572 0.004806 0.14% Castro::swap_state_time_levels() 10 0.002927 0.003811 0.004284 0.13% Castro::post_regrid() 1 0.0016 0.001678 0.001969 0.06% Castro::finalize_do_advance() 10 0.000897 0.001122 0.00123 0.04% Amr::InitAmr() 1 0.0002681 0.0002982 0.0003812 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.224e-05 9.066e-05 0.0001317 0.00% DistributionMapping::LeastUsedCPUs() 1 7.319e-06 8.423e-05 0.000122 0.00% Castro::enforce_consistent_e() 1 8.162e-05 8.734e-05 9.174e-05 0.00% FabArrayBase::getCPC() 41 6.654e-05 7.73e-05 8.706e-05 0.00% Amr::writeSmallPlotFile() 1 2.513e-05 4.825e-05 7.193e-05 0.00% Castro::finalize_advance() 10 5.188e-05 5.594e-05 6.066e-05 0.00% Castro::enforce_speed_limit() 62 3.003e-05 3.36e-05 3.714e-05 0.00% FabArrayBase::CPC::define() 2 1.964e-05 2.623e-05 3.433e-05 0.00% Gravity::swapTimeLevels() 10 1.209e-05 1.634e-05 2.49e-05 0.00% Castro::create_source_corrector() 10 1.355e-05 1.654e-05 2.006e-05 0.00% Amr::initSubcycle() 1 8.471e-06 9.168e-06 9.788e-06 0.00% Gravity::set_mass_offset() 10 6.719e-06 7.519e-06 9.184e-06 0.00% Castro::FluxRegFineAdd() 10 5.891e-06 6.755e-06 7.453e-06 0.00% Castro::retry_advance_ctu() 10 4.959e-06 5.723e-06 6.628e-06 0.00% DistributionMapping::Distribute() 1 1.021e-06 1.201e-06 1.414e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-22-gf63c9cf37c54) finalized