MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-20-gfc55c67f72d2) initialized Starting run at 05:37:16 UTC on 2022-04-15. Successfully read inputs file ... Castro git describe: 22.04-2-gb74783602 AMReX git describe: 22.04-20-gfc55c67f7 Microphysics git describe: 22.04-1-gef526ccd reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012662209 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.334854011 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.349091038 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.318671813 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.315092522 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316986462 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.344244354 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.301557027 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.292688511 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291912472 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29015127 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00995079 seconds Ending run at 05:37:19 UTC on 2022-04-15. Run time = 3.342549235 Run time without initialization = 3.168783093 Average number of zones advanced per microsecond: 0.827 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.342 ... 3.342 ... 3.343 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1285 2.1913 2.2492 67.29% Gravity::make_radial_gravity() 21 0.3379 0.3495 0.3571 10.68% MultiFab::min() 10 0.007497 0.07111 0.1357 4.06% Castro::initData() 1 0.03932 0.08023 0.1147 3.43% Castro::estTimeStep() 21 0.01897 0.05597 0.09991 2.99% FabArray::setVal() 143 0.06864 0.07378 0.07864 2.35% FabArray::ParallelCopy_finish() 41 0.03207 0.03906 0.053 1.59% Castro::reset_internal_energy() 63 0.04813 0.04991 0.05149 1.54% StateData::FillBoundary(geom) 41 0.03892 0.04146 0.04537 1.36% Castro::normalize_species() 62 0.04312 0.04398 0.04514 1.35% FabArray::ParallelCopy_nowait() 41 0.04138 0.04276 0.04435 1.33% FillPatchIterator::Initialize 41 0.0239 0.03131 0.03463 1.04% Gravity::interpolate_monopole_grav() 21 0.02753 0.02781 0.02831 0.85% Castro::construct_new_gravity_source() 10 0.0231 0.02495 0.02726 0.82% Castro::do_advance_ctu() 10 0.01769 0.02091 0.02437 0.73% Castro::expand_state() 10 0.01384 0.0196 0.02169 0.65% Castro::computeTemp() 63 0.01805 0.01889 0.01934 0.58% Castro::initialize_do_advance() 10 0.0124 0.01659 0.01848 0.55% MultiFab::Saxpy() 20 0.01514 0.01595 0.01675 0.50% Castro::initialize_advance() 10 0.01079 0.0125 0.01462 0.44% VisMF::Write(FabArray) 2 0.01191 0.01231 0.01438 0.43% Gravity::get_new_grav_vector() 11 0.01036 0.0116 0.0135 0.40% MultiFab::contains_nan() 20 0.01056 0.0116 0.01277 0.38% Castro::construct_old_gravity_source() 10 0.01049 0.01175 0.01256 0.38% FabArray::setDomainBndry() 41 0.008086 0.01072 0.01195 0.36% Amr::writePlotFile() 2 0.008464 0.01072 0.01129 0.34% Gravity::get_old_grav_vector() 10 0.008309 0.009529 0.01076 0.32% Amr::defBaseLevel() 1 0.006829 0.007143 0.007437 0.22% Castro::enforce_min_density() 62 0.006492 0.006892 0.007155 0.21% Castro::construct_new_source() 50 0.006388 0.006698 0.006995 0.21% StateData::define() 4 0.004424 0.00471 0.004794 0.14% main() 1 0.003538 0.003745 0.003919 0.12% Castro::swap_state_time_levels() 10 0.00295 0.003752 0.003899 0.12% Castro::finalize_do_advance() 10 0.000834 0.001105 0.001239 0.04% Amr::coarseTimeStep() 10 0.0003625 0.000594 0.0009798 0.03% Amr::timeStep() 10 0.0001732 0.0002324 0.0004648 0.01% Amr::InitAmr() 1 0.0002889 0.0003132 0.0004095 0.01% Castro::clean_state() 62 0.000133 0.00014 0.0001482 0.00% DistributionMapping::LeastUsedCPUs() 1 7.112e-06 0.0001143 0.0001413 0.00% StateDataPhysBCFunct::() 41 9.918e-05 0.0001199 0.0001394 0.00% Castro::enforce_consistent_e() 1 8.144e-05 8.99e-05 0.0001005 0.00% Castro::construct_old_source() 50 6.935e-05 8.14e-05 8.859e-05 0.00% FabArray::ParallelCopy() 41 7.13e-05 7.95e-05 8.812e-05 0.00% Castro::do_old_sources() 10 5.631e-05 6.573e-05 7.62e-05 0.00% FillPatchSingleLevel 41 5.383e-05 6.629e-05 7.595e-05 0.00% Amr::writeSmallPlotFile() 1 2.447e-05 4.81e-05 7.221e-05 0.00% Castro::do_new_sources() 10 6.116e-05 6.516e-05 6.975e-05 0.00% Amr::FinalizeInit() 1 3.817e-06 1.277e-05 6.97e-05 0.00% Castro::subcycle_advance_ctu() 10 4.256e-05 5.031e-05 6.609e-05 0.00% Castro::construct_old_gravity() 10 5.67e-05 6.138e-05 6.604e-05 0.00% FabArrayBase::getCPC() 41 5.428e-05 5.897e-05 6.374e-05 0.00% Castro::apply_source_to_state() 20 3.844e-05 4.914e-05 6.328e-05 0.00% Castro::construct_new_gravity() 10 3.808e-05 5.111e-05 6.237e-05 0.00% Castro::advance() 10 3.841e-05 4.524e-05 5.613e-05 0.00% Castro::finalize_advance() 10 4.948e-05 5.368e-05 5.592e-05 0.00% Castro::enforce_speed_limit() 62 2.885e-05 3.348e-05 3.803e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.777e-05 2.229e-05 3.294e-05 0.00% FabArrayBase::CPC::define() 2 2.325e-05 2.688e-05 3.225e-05 0.00% Castro::check_for_nan() 20 2.346e-05 2.53e-05 2.82e-05 0.00% Castro::create_source_corrector() 10 1.359e-05 1.761e-05 2.064e-05 0.00% Gravity::swapTimeLevels() 10 1.383e-05 1.544e-05 1.725e-05 0.00% Amr::initSubcycle() 1 9.559e-06 1.115e-05 1.61e-05 0.00% Castro::post_init() 1 3.478e-06 4.914e-06 1.188e-05 0.00% Castro::post_timestep() 10 8.21e-06 9.71e-06 1.157e-05 0.00% Gravity::set_mass_offset() 10 6.883e-06 7.848e-06 9.007e-06 0.00% Castro::computeNewDt() 9 6.822e-06 7.463e-06 8.295e-06 0.00% Castro::FluxRegFineAdd() 10 5.861e-06 6.41e-06 7.967e-06 0.00% Castro::retry_advance_ctu() 10 4.514e-06 5.997e-06 6.713e-06 0.00% Amr::InitializeInit() 1 2.274e-06 4.072e-06 6.551e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.113e-06 4.846e-06 5.939e-06 0.00% Castro::computeInitialDt() 2 2.784e-06 3.685e-06 4.951e-06 0.00% Castro::post_regrid() 1 1.736e-06 2.859e-06 4.616e-06 0.00% Amr::init() 1 1.824e-06 2.491e-06 2.814e-06 0.00% Amr::initialInit() 1 1.185e-06 1.484e-06 1.745e-06 0.00% DistributionMapping::Distribute() 1 1.026e-06 1.193e-06 1.376e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.342 3.342 3.343 100.00% Amr::coarseTimeStep() 10 3.155 3.155 3.155 94.39% Amr::timeStep() 10 3.146 3.146 3.146 94.12% Castro::advance() 10 3.129 3.13 3.13 93.63% Castro::subcycle_advance_ctu() 10 3.05 3.053 3.055 91.41% Castro::do_advance_ctu() 10 3.05 3.053 3.055 91.40% Castro::construct_ctu_hydro_source() 10 2.129 2.191 2.249 67.29% Gravity::make_radial_gravity() 21 0.3379 0.3495 0.3571 10.68% Gravity::get_new_grav_vector() 11 0.228 0.2291 0.2308 6.90% Castro::construct_old_gravity() 10 0.1989 0.2071 0.2134 6.38% Gravity::get_old_grav_vector() 10 0.1979 0.2063 0.2125 6.36% Castro::construct_new_gravity() 10 0.2041 0.2049 0.2058 6.16% Amr::init() 1 0.1732 0.1733 0.1733 5.19% FillPatchIterator::Initialize 41 0.1617 0.1657 0.1695 5.07% Castro::initialize_do_advance() 10 0.149 0.1573 0.163 4.88% Amr::initialInit() 1 0.1601 0.1603 0.1605 4.80% FillPatchSingleLevel 41 0.1184 0.1236 0.1358 4.06% MultiFab::min() 10 0.007497 0.07111 0.1357 4.06% Amr::InitializeInit() 1 0.0579 0.09925 0.1326 3.97% Amr::defBaseLevel() 1 0.0579 0.09924 0.1326 3.97% Castro::clean_state() 62 0.116 0.1189 0.1221 3.65% Castro::initData() 1 0.04346 0.08435 0.119 3.56% Castro::expand_state() 10 0.1049 0.1091 0.1149 3.44% Amr::FinalizeInit() 1 0.02769 0.06107 0.1025 3.07% Castro::estTimeStep() 21 0.01897 0.05597 0.09991 2.99% FabArray::ParallelCopy() 41 0.07506 0.08198 0.09454 2.83% Castro::initialize_advance() 10 0.07425 0.07669 0.07964 2.38% FabArray::setVal() 143 0.06864 0.07378 0.07864 2.35% Castro::computeInitialDt() 2 0.001694 0.03508 0.07631 2.28% Castro::computeTemp() 63 0.06652 0.0688 0.07083 2.12% Castro::do_new_sources() 10 0.0613 0.06563 0.06994 2.09% FabArray::ParallelCopy_finish() 41 0.03207 0.03906 0.053 1.59% Castro::reset_internal_energy() 63 0.04813 0.04991 0.05149 1.54% Castro::do_old_sources() 10 0.04793 0.04887 0.04996 1.49% StateDataPhysBCFunct::() 41 0.03904 0.04158 0.0455 1.36% StateData::FillBoundary(geom) 41 0.03892 0.04146 0.04537 1.36% Castro::normalize_species() 62 0.04312 0.04398 0.04514 1.35% FabArray::ParallelCopy_nowait() 41 0.04146 0.04284 0.04444 1.33% Castro::construct_new_source() 50 0.02966 0.03165 0.03408 1.02% Gravity::interpolate_monopole_grav() 21 0.02753 0.02781 0.02831 0.85% Castro::construct_new_gravity_source() 10 0.0231 0.02495 0.02726 0.82% Castro::post_init() 1 0.02494 0.02523 0.02546 0.76% Amr::writePlotFile() 2 0.02285 0.02303 0.02328 0.70% Castro::apply_source_to_state() 20 0.01519 0.016 0.01681 0.50% MultiFab::Saxpy() 20 0.01514 0.01595 0.01675 0.50% Castro::post_timestep() 10 0.01591 0.0161 0.01629 0.49% VisMF::Write(FabArray) 2 0.01191 0.01231 0.01438 0.43% Castro::check_for_nan() 20 0.01058 0.01163 0.0128 0.38% MultiFab::contains_nan() 20 0.01056 0.0116 0.01277 0.38% Castro::construct_old_source() 50 0.01055 0.01183 0.01265 0.38% Castro::construct_old_gravity_source() 10 0.01049 0.01175 0.01256 0.38% FabArray::setDomainBndry() 41 0.008086 0.01072 0.01195 0.36% Castro::computeNewDt() 9 0.006846 0.007492 0.007895 0.24% Castro::enforce_min_density() 62 0.006492 0.006892 0.007155 0.21% AmrLevel::AmrLevel(dm) 1 0.004442 0.004732 0.004816 0.14% StateData::define() 4 0.004424 0.00471 0.004794 0.14% Castro::swap_state_time_levels() 10 0.00295 0.003752 0.003899 0.12% Castro::post_regrid() 1 0.001531 0.00168 0.001989 0.06% Castro::finalize_do_advance() 10 0.000834 0.001105 0.001239 0.04% Amr::InitAmr() 1 0.0002985 0.0003243 0.000419 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.278e-05 0.0001203 0.0001485 0.00% DistributionMapping::LeastUsedCPUs() 1 7.112e-06 0.0001143 0.0001413 0.00% Castro::enforce_consistent_e() 1 8.144e-05 8.99e-05 0.0001005 0.00% FabArrayBase::getCPC() 41 7.802e-05 8.584e-05 9.128e-05 0.00% Amr::writeSmallPlotFile() 1 2.447e-05 4.81e-05 7.221e-05 0.00% Castro::finalize_advance() 10 5.68e-05 6.009e-05 6.22e-05 0.00% Castro::enforce_speed_limit() 62 2.885e-05 3.348e-05 3.803e-05 0.00% FabArrayBase::CPC::define() 2 2.325e-05 2.688e-05 3.225e-05 0.00% Castro::create_source_corrector() 10 1.359e-05 1.761e-05 2.064e-05 0.00% Gravity::swapTimeLevels() 10 1.383e-05 1.544e-05 1.725e-05 0.00% Amr::initSubcycle() 1 9.559e-06 1.115e-05 1.61e-05 0.00% Gravity::set_mass_offset() 10 6.883e-06 7.848e-06 9.007e-06 0.00% Castro::FluxRegFineAdd() 10 5.861e-06 6.41e-06 7.967e-06 0.00% Castro::retry_advance_ctu() 10 4.514e-06 5.997e-06 6.713e-06 0.00% DistributionMapping::Distribute() 1 1.026e-06 1.193e-06 1.376e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-20-gfc55c67f72d2) finalized