MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-27-g034b43ac787f) initialized Starting run at 05:37:13 UTC on 2022-04-21. Successfully read inputs file ... Castro git describe: 22.04-13-ge738d8fe1 AMReX git describe: 22.04-27-g034b43ac7 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012944444 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.338448525 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.363653853 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.305538917 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.305759025 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.306640623 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.336099766 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297582736 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.289954319 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.289195227 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289273111 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009310906 seconds Ending run at 05:37:16 UTC on 2022-04-21. Run time = 3.378685303 Run time without initialization = 3.134913788 Average number of zones advanced per microsecond: 0.836 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.378 ... 3.379 ... 3.379 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1436 2.1664 2.2017 65.16% Gravity::make_radial_gravity() 21 0.3492 0.3558 0.373 11.04% Castro::initData() 1 0.03774 0.09981 0.1639 4.85% Castro::estTimeStep() 21 0.02075 0.09286 0.1592 4.71% MultiFab::min() 10 0.04138 0.07922 0.1031 3.05% FabArray::ParallelCopy_finish() 41 0.03216 0.04898 0.0827 2.45% FabArray::setVal() 143 0.06095 0.06953 0.07622 2.26% Castro::reset_internal_energy() 63 0.04892 0.05044 0.05216 1.54% Castro::normalize_species() 62 0.04244 0.04397 0.04545 1.35% StateData::FillBoundary(geom) 41 0.03914 0.04092 0.04316 1.28% FabArray::ParallelCopy_nowait() 41 0.03418 0.0392 0.04165 1.23% FillPatchIterator::Initialize 41 0.02343 0.02883 0.03305 0.98% Gravity::interpolate_monopole_grav() 21 0.02783 0.02831 0.02908 0.86% Castro::construct_new_gravity_source() 10 0.02079 0.02333 0.0259 0.77% Castro::do_advance_ctu() 10 0.01506 0.01973 0.02433 0.72% Castro::computeTemp() 63 0.01864 0.01937 0.02066 0.61% Castro::expand_state() 10 0.0122 0.0181 0.02045 0.61% Castro::initialize_do_advance() 10 0.01059 0.01594 0.01786 0.53% MultiFab::Saxpy() 20 0.01254 0.01458 0.01599 0.47% VisMF::Write(FabArray) 2 0.01176 0.01223 0.01437 0.43% Castro::initialize_advance() 10 0.0082 0.01158 0.01374 0.41% Gravity::get_new_grav_vector() 11 0.00959 0.01083 0.01288 0.38% Castro::construct_old_gravity_source() 10 0.007157 0.01093 0.01262 0.37% Gravity::get_old_grav_vector() 10 0.006857 0.009232 0.01234 0.37% MultiFab::contains_nan() 20 0.01015 0.01099 0.01182 0.35% Amr::writePlotFile() 2 0.008093 0.01066 0.01148 0.34% FabArray::setDomainBndry() 41 0.006916 0.009345 0.01093 0.32% Amr::defBaseLevel() 1 0.006398 0.008002 0.009647 0.29% Castro::enforce_min_density() 62 0.00639 0.006702 0.006934 0.21% Castro::construct_new_source() 50 0.005841 0.006364 0.006745 0.20% StateData::define() 4 0.004278 0.005356 0.006559 0.19% Castro::swap_state_time_levels() 10 0.002758 0.00354 0.004084 0.12% main() 1 0.003217 0.00364 0.003891 0.12% Amr::coarseTimeStep() 10 0.0002726 0.0007487 0.001285 0.04% Castro::finalize_do_advance() 10 0.000463 0.0009052 0.001093 0.03% Amr::InitAmr() 1 0.0002518 0.0003803 0.000484 0.01% Amr::timeStep() 10 0.0001565 0.0002191 0.0004336 0.01% DistributionMapping::LeastUsedCPUs() 1 1.474e-05 0.0001486 0.0002958 0.01% StateDataPhysBCFunct::() 41 0.0001273 0.0001387 0.0001797 0.01% Castro::clean_state() 62 0.0001161 0.0001353 0.000163 0.00% Castro::enforce_consistent_e() 1 7.803e-05 0.0001109 0.0001509 0.00% Castro::construct_old_source() 50 6.117e-05 7.944e-05 9.117e-05 0.00% FillPatchSingleLevel 41 6.052e-05 6.958e-05 8.519e-05 0.00% FabArray::ParallelCopy() 41 5.798e-05 6.919e-05 8.503e-05 0.00% Castro::do_old_sources() 10 5.599e-05 6.13e-05 7.176e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 4.561e-05 7.12e-05 0.00% Castro::construct_old_gravity() 10 5.492e-05 6.203e-05 6.943e-05 0.00% Castro::finalize_advance() 10 5.114e-05 5.724e-05 6.888e-05 0.00% Castro::apply_source_to_state() 20 4.362e-05 5.257e-05 6.867e-05 0.00% FabArrayBase::getCPC() 41 4.999e-05 5.682e-05 6.863e-05 0.00% Castro::do_new_sources() 10 5.576e-05 6.139e-05 6.843e-05 0.00% Castro::subcycle_advance_ctu() 10 4.737e-05 5.295e-05 6.017e-05 0.00% Amr::FinalizeInit() 1 4.085e-06 1.134e-05 5.838e-05 0.00% Castro::construct_new_gravity() 10 4.065e-05 4.743e-05 5.684e-05 0.00% Castro::advance() 10 4.078e-05 4.523e-05 5.402e-05 0.00% FabArrayBase::CPC::define() 2 2.252e-05 2.813e-05 3.745e-05 0.00% Castro::enforce_speed_limit() 62 2.721e-05 3.121e-05 3.583e-05 0.00% Castro::check_for_nan() 20 2.304e-05 2.581e-05 3.065e-05 0.00% Castro::retry_advance_ctu() 10 4.892e-06 7.817e-06 2.293e-05 0.00% Castro::FluxRegFineAdd() 10 4.831e-06 8.309e-06 2.229e-05 0.00% Castro::create_source_corrector() 10 1.371e-05 1.716e-05 2.222e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.05e-05 1.394e-05 1.854e-05 0.00% Amr::initSubcycle() 1 8.552e-06 1.222e-05 1.618e-05 0.00% Gravity::swapTimeLevels() 10 1.078e-05 1.296e-05 1.522e-05 0.00% Castro::post_init() 1 3.159e-06 5.896e-06 1.323e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.09e-06 7.437e-06 1.203e-05 0.00% Castro::post_timestep() 10 7.963e-06 9.635e-06 1.078e-05 0.00% Gravity::set_mass_offset() 10 6.843e-06 7.77e-06 9.041e-06 0.00% Castro::computeNewDt() 9 6.169e-06 7.086e-06 8.131e-06 0.00% Amr::InitializeInit() 1 2.314e-06 4.186e-06 7.039e-06 0.00% Castro::post_regrid() 1 3.117e-06 3.479e-06 4.537e-06 0.00% Castro::computeInitialDt() 2 3.331e-06 3.626e-06 4.233e-06 0.00% Amr::init() 1 1.781e-06 2.223e-06 2.713e-06 0.00% Amr::initialInit() 1 9.68e-07 1.452e-06 1.727e-06 0.00% DistributionMapping::Distribute() 1 8.93e-07 1.31e-06 1.63e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.378 3.378 3.379 100.00% Amr::coarseTimeStep() 10 3.122 3.122 3.122 92.39% Amr::timeStep() 10 3.112 3.112 3.113 92.13% Castro::advance() 10 3.096 3.096 3.096 91.64% Castro::subcycle_advance_ctu() 10 3.02 3.023 3.032 89.73% Castro::do_advance_ctu() 10 3.02 3.023 3.032 89.73% Castro::construct_ctu_hydro_source() 10 2.144 2.166 2.202 65.16% Gravity::make_radial_gravity() 21 0.3492 0.3558 0.373 11.04% Amr::init() 1 0.2431 0.2432 0.2434 7.20% Gravity::get_new_grav_vector() 11 0.2353 0.2366 0.2384 7.06% Amr::initialInit() 1 0.2293 0.2298 0.2302 6.81% Castro::construct_old_gravity() 10 0.2028 0.2084 0.2218 6.57% Gravity::get_old_grav_vector() 10 0.2019 0.2076 0.2212 6.55% Castro::construct_new_gravity() 10 0.1992 0.1997 0.2002 5.93% Amr::InitializeInit() 1 0.05471 0.1202 0.1883 5.57% Amr::defBaseLevel() 1 0.05471 0.1202 0.1883 5.57% FillPatchIterator::Initialize 41 0.1559 0.1676 0.1872 5.54% Amr::FinalizeInit() 1 0.04125 0.1095 0.175 5.18% Castro::initData() 1 0.04164 0.1046 0.1698 5.03% Castro::estTimeStep() 21 0.02075 0.09286 0.1592 4.71% FillPatchSingleLevel 41 0.1143 0.1295 0.1568 4.64% Castro::initialize_do_advance() 10 0.1468 0.1517 0.1554 4.60% Castro::computeInitialDt() 2 0.002116 0.07035 0.136 4.03% Castro::clean_state() 62 0.1164 0.1194 0.1238 3.66% FabArray::ParallelCopy() 41 0.07397 0.08833 0.1171 3.46% Castro::expand_state() 10 0.09994 0.1044 0.1093 3.23% MultiFab::min() 10 0.04138 0.07922 0.1031 3.05% FabArray::ParallelCopy_finish() 41 0.03216 0.04898 0.0827 2.45% Castro::initialize_advance() 10 0.06393 0.07334 0.07626 2.26% FabArray::setVal() 143 0.06095 0.06953 0.07622 2.26% Castro::computeTemp() 63 0.06803 0.06981 0.07282 2.16% Castro::do_new_sources() 10 0.05845 0.06225 0.06735 1.99% Castro::do_old_sources() 10 0.0405 0.04744 0.05355 1.58% Castro::reset_internal_energy() 63 0.04892 0.05044 0.05216 1.54% Castro::normalize_species() 62 0.04244 0.04397 0.04545 1.35% StateDataPhysBCFunct::() 41 0.03928 0.04106 0.04329 1.28% StateData::FillBoundary(geom) 41 0.03914 0.04092 0.04316 1.28% FabArray::ParallelCopy_nowait() 41 0.03427 0.03928 0.04174 1.24% Castro::post_init() 1 0.03701 0.03789 0.03883 1.15% Castro::construct_new_source() 50 0.02663 0.02969 0.03258 0.96% Gravity::interpolate_monopole_grav() 21 0.02783 0.02831 0.02908 0.86% Castro::construct_new_gravity_source() 10 0.02079 0.02333 0.0259 0.77% Amr::writePlotFile() 2 0.02247 0.0229 0.02324 0.69% Castro::post_timestep() 10 0.01555 0.01599 0.01645 0.49% Castro::apply_source_to_state() 20 0.01259 0.01463 0.01605 0.47% MultiFab::Saxpy() 20 0.01254 0.01458 0.01599 0.47% VisMF::Write(FabArray) 2 0.01176 0.01223 0.01437 0.43% Castro::construct_old_source() 50 0.007218 0.01101 0.0127 0.38% Castro::construct_old_gravity_source() 10 0.007157 0.01093 0.01262 0.37% Castro::check_for_nan() 20 0.01018 0.01101 0.01184 0.35% MultiFab::contains_nan() 20 0.01015 0.01099 0.01182 0.35% FabArray::setDomainBndry() 41 0.006916 0.009345 0.01093 0.32% Castro::computeNewDt() 9 0.006999 0.007765 0.008464 0.25% Castro::enforce_min_density() 62 0.00639 0.006702 0.006934 0.21% AmrLevel::AmrLevel(dm) 1 0.004288 0.00537 0.006575 0.19% StateData::define() 4 0.004278 0.005356 0.006559 0.19% Castro::swap_state_time_levels() 10 0.002758 0.00354 0.004084 0.12% Castro::post_regrid() 1 0.001638 0.002221 0.002833 0.08% Castro::finalize_do_advance() 10 0.000463 0.0009052 0.001093 0.03% Amr::InitAmr() 1 0.0002609 0.0003925 0.0005 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 2.148e-05 0.0001573 0.000303 0.01% DistributionMapping::LeastUsedCPUs() 1 1.474e-05 0.0001486 0.0002958 0.01% Castro::enforce_consistent_e() 1 7.803e-05 0.0001109 0.0001509 0.00% FabArrayBase::getCPC() 41 7.439e-05 8.495e-05 9.601e-05 0.00% Castro::finalize_advance() 10 5.873e-05 6.555e-05 7.477e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 4.561e-05 7.12e-05 0.00% FabArrayBase::CPC::define() 2 2.252e-05 2.813e-05 3.745e-05 0.00% Castro::enforce_speed_limit() 62 2.721e-05 3.121e-05 3.583e-05 0.00% Castro::retry_advance_ctu() 10 4.892e-06 7.817e-06 2.293e-05 0.00% Castro::FluxRegFineAdd() 10 4.831e-06 8.309e-06 2.229e-05 0.00% Castro::create_source_corrector() 10 1.371e-05 1.716e-05 2.222e-05 0.00% Amr::initSubcycle() 1 8.552e-06 1.222e-05 1.618e-05 0.00% Gravity::swapTimeLevels() 10 1.078e-05 1.296e-05 1.522e-05 0.00% Gravity::set_mass_offset() 10 6.843e-06 7.77e-06 9.041e-06 0.00% DistributionMapping::Distribute() 1 8.93e-07 1.31e-06 1.63e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-27-g034b43ac787f) finalized