MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 05:37:08 UTC on 2022-04-22. Successfully read inputs file ... Castro git describe: 22.04-13-ge738d8fe1 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013305607 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.343394873 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.324706078 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.310737892 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312357561 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312681645 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337749837 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.301777549 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294625313 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.293303416 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29443525 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009173927 seconds Ending run at 05:37:11 UTC on 2022-04-22. Run time = 3.31291401 Run time without initialization = 3.138213598 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.312 ... 3.313 ... 3.313 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1343 2.1763 2.2291 67.28% Gravity::make_radial_gravity() 21 0.3317 0.3476 0.3687 11.13% MultiFab::min() 10 0.02321 0.08106 0.1227 3.70% Castro::initData() 1 0.03775 0.07674 0.1131 3.41% Castro::estTimeStep() 21 0.01943 0.06127 0.1044 3.15% FabArray::setVal() 143 0.05831 0.06974 0.07599 2.29% FabArray::ParallelCopy_finish() 41 0.0326 0.03995 0.07226 2.18% Castro::reset_internal_energy() 63 0.04736 0.04981 0.05165 1.56% Castro::normalize_species() 62 0.04236 0.0437 0.0448 1.35% StateData::FillBoundary(geom) 41 0.03817 0.04128 0.04445 1.34% FabArray::ParallelCopy_nowait() 41 0.03363 0.03959 0.04194 1.27% FillPatchIterator::Initialize 41 0.02296 0.02821 0.03133 0.95% Gravity::interpolate_monopole_grav() 21 0.02773 0.02818 0.02879 0.87% Castro::construct_new_gravity_source() 10 0.0199 0.02338 0.02608 0.79% Castro::do_advance_ctu() 10 0.0132 0.01928 0.02321 0.70% Castro::computeTemp() 63 0.01826 0.01911 0.01997 0.60% Castro::expand_state() 10 0.01102 0.01724 0.01986 0.60% Castro::initialize_do_advance() 10 0.01057 0.01585 0.01693 0.51% MultiFab::Saxpy() 20 0.01294 0.01431 0.01534 0.46% VisMF::Write(FabArray) 2 0.01173 0.01226 0.01475 0.45% Castro::initialize_advance() 10 0.006359 0.01127 0.01392 0.42% Gravity::get_new_grav_vector() 11 0.009581 0.01082 0.01313 0.40% MultiFab::contains_nan() 20 0.009914 0.01131 0.01279 0.39% Castro::construct_old_gravity_source() 10 0.007091 0.01081 0.01171 0.35% Amr::writePlotFile() 2 0.007945 0.0105 0.01115 0.34% FabArray::setDomainBndry() 41 0.006828 0.009269 0.01082 0.33% Gravity::get_old_grav_vector() 10 0.00669 0.008557 0.009718 0.29% Amr::defBaseLevel() 1 0.006606 0.00685 0.00726 0.22% Castro::enforce_min_density() 62 0.006419 0.006622 0.006903 0.21% Castro::construct_new_source() 50 0.005559 0.006323 0.006659 0.20% StateData::define() 4 0.0043 0.004509 0.004793 0.14% main() 1 0.003554 0.003907 0.004093 0.12% Castro::swap_state_time_levels() 10 0.001959 0.003522 0.003904 0.12% Amr::coarseTimeStep() 10 0.0003047 0.0007395 0.002298 0.07% Castro::finalize_do_advance() 10 0.0004563 0.000951 0.001146 0.03% Amr::timeStep() 10 0.0001816 0.0002262 0.0004269 0.01% Amr::InitAmr() 1 0.0002653 0.0002923 0.0004203 0.01% DistributionMapping::LeastUsedCPUs() 1 8.753e-06 0.0001493 0.0001723 0.01% StateDataPhysBCFunct::() 41 0.0001177 0.0001332 0.0001574 0.00% Castro::clean_state() 62 0.000116 0.0001325 0.0001483 0.00% Castro::enforce_consistent_e() 1 7.421e-05 8.507e-05 9.679e-05 0.00% Castro::construct_old_source() 50 4.412e-05 6.771e-05 8.471e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 4.521e-05 8.368e-05 0.00% Castro::do_new_sources() 10 4.662e-05 5.903e-05 7.84e-05 0.00% Amr::FinalizeInit() 1 3.829e-06 1.385e-05 7.593e-05 0.00% Castro::do_old_sources() 10 4.054e-05 5.854e-05 7.499e-05 0.00% Castro::subcycle_advance_ctu() 10 3.477e-05 4.946e-05 7.183e-05 0.00% FabArray::ParallelCopy() 41 5.55e-05 6.36e-05 6.985e-05 0.00% FillPatchSingleLevel 41 5.301e-05 6.071e-05 6.788e-05 0.00% Castro::construct_old_gravity() 10 4.152e-05 5.282e-05 6.435e-05 0.00% FabArrayBase::getCPC() 41 4.291e-05 4.971e-05 6.163e-05 0.00% Castro::finalize_advance() 10 5.022e-05 5.355e-05 5.65e-05 0.00% Castro::construct_new_gravity() 10 3.633e-05 4.605e-05 5.424e-05 0.00% Castro::advance() 10 3.208e-05 4.087e-05 5.279e-05 0.00% Castro::apply_source_to_state() 20 3.129e-05 4.044e-05 4.534e-05 0.00% Castro::check_for_nan() 20 2.215e-05 2.584e-05 3.71e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.721e-05 2.304e-05 3.247e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 2.916e-05 3.232e-05 0.00% FabArrayBase::CPC::define() 2 2.193e-05 2.628e-05 2.894e-05 0.00% Castro::create_source_corrector() 10 1.159e-05 1.615e-05 1.833e-05 0.00% Castro::post_timestep() 10 8.118e-06 1.041e-05 1.579e-05 0.00% Gravity::swapTimeLevels() 10 6.85e-06 1.169e-05 1.315e-05 0.00% Amr::initSubcycle() 1 8.798e-06 9.493e-06 1.004e-05 0.00% Gravity::set_mass_offset() 10 7.409e-06 7.824e-06 8.473e-06 0.00% Castro::computeNewDt() 9 6.649e-06 7.093e-06 8.134e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.97e-06 5.117e-06 8.059e-06 0.00% Castro::FluxRegFineAdd() 10 5.475e-06 6.368e-06 7.072e-06 0.00% Castro::retry_advance_ctu() 10 5.135e-06 5.695e-06 6.226e-06 0.00% Castro::post_init() 1 3.284e-06 4.366e-06 5.988e-06 0.00% Amr::InitializeInit() 1 2.129e-06 3.349e-06 5.898e-06 0.00% Castro::post_regrid() 1 2.154e-06 3.722e-06 5.158e-06 0.00% Castro::computeInitialDt() 2 3.875e-06 4.284e-06 4.861e-06 0.00% Amr::init() 1 1.72e-06 2.296e-06 2.814e-06 0.00% DistributionMapping::Distribute() 1 9.54e-07 1.177e-06 1.81e-06 0.00% Amr::initialInit() 1 1.211e-06 1.346e-06 1.477e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.312 3.313 3.313 100.00% Amr::coarseTimeStep() 10 3.125 3.125 3.125 94.33% Amr::timeStep() 10 3.115 3.116 3.117 94.07% Castro::advance() 10 3.099 3.099 3.1 93.56% Castro::subcycle_advance_ctu() 10 3.023 3.027 3.04 91.77% Castro::do_advance_ctu() 10 3.023 3.027 3.04 91.77% Castro::construct_ctu_hydro_source() 10 2.134 2.176 2.229 67.28% Gravity::make_radial_gravity() 21 0.3317 0.3476 0.3687 11.13% Gravity::get_new_grav_vector() 11 0.2244 0.2252 0.2268 6.85% Castro::construct_old_gravity() 10 0.1936 0.2057 0.2239 6.76% Gravity::get_old_grav_vector() 10 0.1928 0.205 0.2233 6.74% Castro::construct_new_gravity() 10 0.1988 0.1993 0.2004 6.05% FillPatchIterator::Initialize 41 0.1501 0.1586 0.1746 5.27% Amr::init() 1 0.1741 0.1743 0.1743 5.26% Amr::initialInit() 1 0.1605 0.1607 0.1608 4.85% Castro::initialize_do_advance() 10 0.1466 0.1513 0.1564 4.72% FillPatchSingleLevel 41 0.1129 0.1212 0.1448 4.37% Amr::InitializeInit() 1 0.05622 0.09508 0.1316 3.97% Amr::defBaseLevel() 1 0.05622 0.09508 0.1315 3.97% MultiFab::min() 10 0.02321 0.08106 0.1227 3.70% Castro::clean_state() 62 0.1138 0.1185 0.1215 3.67% Castro::initData() 1 0.04149 0.08069 0.1172 3.54% Castro::expand_state() 10 0.09806 0.1042 0.1107 3.34% FabArray::ParallelCopy() 41 0.07199 0.07968 0.106 3.20% Amr::FinalizeInit() 1 0.02926 0.06564 0.1046 3.16% Castro::estTimeStep() 21 0.01943 0.06127 0.1044 3.15% Castro::computeInitialDt() 2 0.001708 0.03815 0.07703 2.33% Castro::initialize_advance() 10 0.05827 0.07226 0.07604 2.30% FabArray::setVal() 143 0.05831 0.06974 0.07599 2.29% FabArray::ParallelCopy_finish() 41 0.0326 0.03995 0.07226 2.18% Castro::computeTemp() 63 0.06572 0.06893 0.07112 2.15% Castro::do_new_sources() 10 0.05678 0.06304 0.06926 2.09% Castro::reset_internal_energy() 63 0.04736 0.04981 0.05165 1.56% Castro::do_old_sources() 10 0.04087 0.04666 0.04846 1.46% Castro::normalize_species() 62 0.04236 0.0437 0.0448 1.35% StateDataPhysBCFunct::() 41 0.0383 0.04141 0.04459 1.35% StateData::FillBoundary(geom) 41 0.03817 0.04128 0.04445 1.34% FabArray::ParallelCopy_nowait() 41 0.03371 0.03966 0.04201 1.27% Castro::construct_new_source() 50 0.02546 0.0297 0.03274 0.99% Gravity::interpolate_monopole_grav() 21 0.02773 0.02818 0.02879 0.87% Castro::post_init() 1 0.02662 0.0268 0.0269 0.81% Castro::construct_new_gravity_source() 10 0.0199 0.02338 0.02608 0.79% Amr::writePlotFile() 2 0.02269 0.02277 0.02299 0.69% Castro::post_timestep() 10 0.01525 0.01598 0.01716 0.52% Castro::apply_source_to_state() 20 0.01297 0.01435 0.01539 0.46% MultiFab::Saxpy() 20 0.01294 0.01431 0.01534 0.46% VisMF::Write(FabArray) 2 0.01173 0.01226 0.01475 0.45% Castro::check_for_nan() 20 0.009936 0.01134 0.01282 0.39% MultiFab::contains_nan() 20 0.009914 0.01131 0.01279 0.39% Castro::construct_old_source() 50 0.007135 0.01088 0.01179 0.36% Castro::construct_old_gravity_source() 10 0.007091 0.01081 0.01171 0.35% FabArray::setDomainBndry() 41 0.006828 0.009269 0.01082 0.33% Castro::computeNewDt() 9 0.006649 0.007818 0.008654 0.26% Castro::enforce_min_density() 62 0.006419 0.006622 0.006903 0.21% AmrLevel::AmrLevel(dm) 1 0.004319 0.004532 0.004825 0.15% StateData::define() 4 0.0043 0.004509 0.004793 0.14% Castro::swap_state_time_levels() 10 0.001959 0.003522 0.003904 0.12% Castro::post_regrid() 1 0.001547 0.001596 0.001674 0.05% Castro::finalize_do_advance() 10 0.0004563 0.000951 0.001146 0.03% Amr::InitAmr() 1 0.0002749 0.0003018 0.0004304 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.436e-05 0.0001556 0.0001796 0.01% DistributionMapping::LeastUsedCPUs() 1 8.753e-06 0.0001493 0.0001723 0.01% Castro::enforce_consistent_e() 1 7.421e-05 8.507e-05 9.679e-05 0.00% FabArrayBase::getCPC() 41 6.485e-05 7.599e-05 8.73e-05 0.00% Amr::writeSmallPlotFile() 1 2.558e-05 4.521e-05 8.368e-05 0.00% Castro::finalize_advance() 10 5.569e-05 5.992e-05 6.331e-05 0.00% Castro::enforce_speed_limit() 62 2.616e-05 2.916e-05 3.232e-05 0.00% FabArrayBase::CPC::define() 2 2.193e-05 2.628e-05 2.894e-05 0.00% Castro::create_source_corrector() 10 1.159e-05 1.615e-05 1.833e-05 0.00% Gravity::swapTimeLevels() 10 6.85e-06 1.169e-05 1.315e-05 0.00% Amr::initSubcycle() 1 8.798e-06 9.493e-06 1.004e-05 0.00% Gravity::set_mass_offset() 10 7.409e-06 7.824e-06 8.473e-06 0.00% Castro::FluxRegFineAdd() 10 5.475e-06 6.368e-06 7.072e-06 0.00% Castro::retry_advance_ctu() 10 5.135e-06 5.695e-06 6.226e-06 0.00% DistributionMapping::Distribute() 1 9.54e-07 1.177e-06 1.81e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized