MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 19:54:25 UTC on 2022-04-23. Successfully read inputs file ... Castro git describe: 22.04-16-ga01656b12 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01308082 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.355896301 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327384606 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.31614434 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31571979 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.317027446 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.344420801 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.299846572 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29448174 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.295121128 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294311107 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009587703 seconds Ending run at 19:54:28 UTC on 2022-04-23. Run time = 3.396126625 Run time without initialization = 3.19527842 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.396 ... 3.396 ... 3.396 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1334 2.1822 2.2493 66.23% Gravity::make_radial_gravity() 21 0.3349 0.35 0.3585 10.56% Castro::do_advance_ctu() 10 0.03546 0.1077 0.1606 4.73% Castro::initData() 1 0.04071 0.08006 0.1372 4.04% Castro::estTimeStep() 21 0.01727 0.0811 0.1207 3.55% FabArray::setVal() 143 0.06906 0.07331 0.07777 2.29% Castro::reset_internal_energy() 63 0.04869 0.05035 0.05337 1.57% FabArray::ParallelCopy_finish() 41 0.03292 0.03926 0.05184 1.53% StateData::FillBoundary(geom) 41 0.03827 0.04254 0.04939 1.45% Castro::normalize_species() 62 0.04286 0.04365 0.04477 1.32% FabArray::ParallelCopy_nowait() 41 0.0396 0.04216 0.04398 1.29% FillPatchIterator::Initialize 41 0.02422 0.03145 0.03477 1.02% Amr::writePlotFile() 2 0.02978 0.03235 0.03331 0.98% Gravity::interpolate_monopole_grav() 21 0.02771 0.02818 0.02892 0.85% Castro::construct_new_gravity_source() 10 0.02278 0.02481 0.02682 0.79% Castro::expand_state() 10 0.01457 0.019 0.02128 0.63% Castro::computeTemp() 63 0.01847 0.01915 0.02051 0.60% Castro::initialize_do_advance() 10 0.01379 0.01709 0.01819 0.54% MultiFab::Saxpy() 20 0.01494 0.01589 0.01655 0.49% Castro::initialize_advance() 10 0.01049 0.01242 0.01445 0.43% VisMF::Write(FabArray) 2 0.0113 0.01203 0.01444 0.43% Gravity::get_new_grav_vector() 11 0.01032 0.01164 0.01339 0.39% MultiFab::contains_nan() 20 0.01036 0.01159 0.01315 0.39% Castro::construct_old_gravity_source() 10 0.01109 0.01175 0.01251 0.37% FabArray::setDomainBndry() 41 0.007642 0.01057 0.01178 0.35% Gravity::get_old_grav_vector() 10 0.008603 0.009476 0.01078 0.32% Amr::defBaseLevel() 1 0.006633 0.00729 0.007895 0.23% Castro::construct_new_source() 50 0.006379 0.00664 0.006905 0.20% Castro::enforce_min_density() 62 0.005907 0.006357 0.006685 0.20% StateData::define() 4 0.004364 0.004731 0.005083 0.15% Castro::swap_state_time_levels() 10 0.002924 0.003811 0.0043 0.13% main() 1 0.003509 0.00371 0.003922 0.12% Amr::coarseTimeStep() 10 0.000374 0.0006533 0.001492 0.04% Castro::finalize_do_advance() 10 0.000797 0.001035 0.001139 0.03% Amr::InitAmr() 1 0.000262 0.0003274 0.0004609 0.01% Amr::timeStep() 10 0.0001827 0.0002341 0.0004473 0.01% DistributionMapping::LeastUsedCPUs() 1 1.269e-05 0.0001711 0.0002297 0.01% Castro::clean_state() 62 0.0001351 0.0001448 0.0001663 0.00% StateDataPhysBCFunct::() 41 0.0001207 0.0001353 0.0001579 0.00% Castro::enforce_consistent_e() 1 7.996e-05 9.195e-05 0.0001044 0.00% Castro::construct_old_source() 50 4.891e-05 7.129e-05 8.653e-05 0.00% Amr::FinalizeInit() 1 3.958e-06 1.418e-05 8.123e-05 0.00% FillPatchSingleLevel 41 6.207e-05 7.224e-05 7.792e-05 0.00% Castro::do_old_sources() 10 4.7e-05 6.064e-05 7.579e-05 0.00% Castro::subcycle_advance_ctu() 10 4.336e-05 5.801e-05 7.232e-05 0.00% FabArray::ParallelCopy() 41 6.116e-05 6.411e-05 7.218e-05 0.00% Amr::writeSmallPlotFile() 1 2.649e-05 6.058e-05 7.13e-05 0.00% Castro::do_new_sources() 10 5.113e-05 5.986e-05 6.705e-05 0.00% Castro::construct_old_gravity() 10 4.859e-05 5.429e-05 5.871e-05 0.00% Castro::finalize_advance() 10 4.943e-05 5.395e-05 5.705e-05 0.00% FabArrayBase::getCPC() 41 4.181e-05 4.994e-05 5.571e-05 0.00% Castro::apply_source_to_state() 20 4.283e-05 4.764e-05 5.428e-05 0.00% Castro::construct_new_gravity() 10 4.206e-05 4.54e-05 5.02e-05 0.00% Castro::advance() 10 3.147e-05 3.869e-05 4.589e-05 0.00% Castro::enforce_speed_limit() 62 2.8e-05 3.181e-05 3.565e-05 0.00% FabArrayBase::CPC::define() 2 2.209e-05 2.625e-05 3.021e-05 0.00% Castro::check_for_nan() 20 2.35e-05 2.666e-05 2.932e-05 0.00% Castro::create_source_corrector() 10 1.413e-05 1.71e-05 1.997e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.334e-05 1.514e-05 1.682e-05 0.00% Gravity::swapTimeLevels() 10 1.055e-05 1.382e-05 1.662e-05 0.00% Castro::post_timestep() 10 7.86e-06 9.385e-06 1.098e-05 0.00% Amr::initSubcycle() 1 8.306e-06 9.554e-06 1.039e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.343e-06 5.558e-06 9.836e-06 0.00% Castro::post_init() 1 3.35e-06 4.81e-06 9.349e-06 0.00% Castro::computeNewDt() 9 7.105e-06 7.799e-06 8.586e-06 0.00% Gravity::set_mass_offset() 10 6.818e-06 7.374e-06 8.087e-06 0.00% Castro::retry_advance_ctu() 10 5.179e-06 6.033e-06 7.715e-06 0.00% Castro::FluxRegFineAdd() 10 4.946e-06 6.324e-06 7.501e-06 0.00% Amr::InitializeInit() 1 2.308e-06 3.914e-06 7.232e-06 0.00% Castro::computeInitialDt() 2 3.12e-06 4.082e-06 5.779e-06 0.00% Castro::post_regrid() 1 2.169e-06 3.114e-06 4.173e-06 0.00% Amr::init() 1 1.715e-06 2.005e-06 2.276e-06 0.00% Amr::initialInit() 1 1.138e-06 1.529e-06 1.94e-06 0.00% DistributionMapping::Distribute() 1 1.065e-06 1.217e-06 1.513e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.396 3.396 3.396 100.00% Amr::coarseTimeStep() 10 3.161 3.161 3.161 93.06% Amr::timeStep() 10 3.151 3.151 3.152 92.82% Castro::advance() 10 3.135 3.135 3.135 92.32% Castro::subcycle_advance_ctu() 10 3.055 3.059 3.061 90.12% Castro::do_advance_ctu() 10 3.055 3.058 3.061 90.12% Castro::construct_ctu_hydro_source() 10 2.133 2.182 2.249 66.23% Gravity::make_radial_gravity() 21 0.3349 0.35 0.3585 10.56% Gravity::get_new_grav_vector() 11 0.2254 0.2267 0.2279 6.71% Castro::construct_old_gravity() 10 0.1995 0.2105 0.2176 6.41% Gravity::get_old_grav_vector() 10 0.1986 0.2097 0.2168 6.38% Castro::construct_new_gravity() 10 0.2 0.2005 0.2012 5.92% Amr::init() 1 0.2002 0.2004 0.2004 5.90% Amr::initialInit() 1 0.1867 0.187 0.1873 5.52% FillPatchIterator::Initialize 41 0.1604 0.1663 0.1739 5.12% Castro::initialize_do_advance() 10 0.15 0.1582 0.1642 4.84% Amr::InitializeInit() 1 0.05962 0.09872 0.1572 4.63% Amr::defBaseLevel() 1 0.05961 0.09871 0.1572 4.63% Castro::initData() 1 0.04447 0.08415 0.1414 4.16% FillPatchSingleLevel 41 0.118 0.1243 0.1312 3.86% Amr::FinalizeInit() 1 0.03016 0.08827 0.1274 3.75% Castro::clean_state() 62 0.1155 0.1187 0.1231 3.62% Castro::estTimeStep() 21 0.01727 0.0811 0.1207 3.55% Castro::expand_state() 10 0.1012 0.1092 0.1154 3.40% Castro::computeInitialDt() 2 0.00194 0.06037 0.09931 2.92% FabArray::ParallelCopy() 41 0.07569 0.08156 0.09157 2.70% Castro::initialize_advance() 10 0.07449 0.07665 0.08022 2.36% FabArray::setVal() 143 0.06906 0.07331 0.07777 2.29% Castro::computeTemp() 63 0.06721 0.0695 0.07388 2.18% Castro::do_new_sources() 10 0.06087 0.06547 0.06985 2.06% Castro::reset_internal_energy() 63 0.04869 0.05035 0.05337 1.57% FabArray::ParallelCopy_finish() 41 0.03292 0.03926 0.05184 1.53% Castro::do_old_sources() 10 0.04822 0.04888 0.04992 1.47% StateDataPhysBCFunct::() 41 0.03839 0.04268 0.04953 1.46% StateData::FillBoundary(geom) 41 0.03827 0.04254 0.04939 1.45% Castro::normalize_species() 62 0.04286 0.04365 0.04477 1.32% Amr::writePlotFile() 2 0.04405 0.04437 0.04469 1.32% FabArray::ParallelCopy_nowait() 41 0.03968 0.04223 0.04406 1.30% Castro::construct_new_source() 50 0.0293 0.03145 0.03372 0.99% Gravity::interpolate_monopole_grav() 21 0.02771 0.02818 0.02892 0.85% Castro::post_init() 1 0.027 0.02723 0.02732 0.80% Castro::construct_new_gravity_source() 10 0.02278 0.02481 0.02682 0.79% Castro::post_timestep() 10 0.01547 0.01587 0.01663 0.49% Castro::apply_source_to_state() 20 0.01498 0.01594 0.01659 0.49% MultiFab::Saxpy() 20 0.01494 0.01589 0.01655 0.49% VisMF::Write(FabArray) 2 0.0113 0.01203 0.01444 0.43% Castro::check_for_nan() 20 0.01039 0.01161 0.01318 0.39% MultiFab::contains_nan() 20 0.01036 0.01159 0.01315 0.39% Castro::construct_old_source() 50 0.01114 0.01182 0.01259 0.37% Castro::construct_old_gravity_source() 10 0.01109 0.01175 0.01251 0.37% FabArray::setDomainBndry() 41 0.007642 0.01057 0.01178 0.35% Castro::computeNewDt() 9 0.006818 0.007444 0.007942 0.23% Castro::enforce_min_density() 62 0.005907 0.006357 0.006685 0.20% AmrLevel::AmrLevel(dm) 1 0.004378 0.004746 0.005098 0.15% StateData::define() 4 0.004364 0.004731 0.005083 0.15% Castro::swap_state_time_levels() 10 0.002924 0.003811 0.0043 0.13% Castro::post_regrid() 1 0.001526 0.001644 0.001935 0.06% Castro::finalize_do_advance() 10 0.000797 0.001035 0.001139 0.03% Amr::InitAmr() 1 0.0002715 0.0003369 0.0004709 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.879e-05 0.0001779 0.0002408 0.01% DistributionMapping::LeastUsedCPUs() 1 1.269e-05 0.0001711 0.0002297 0.01% Castro::enforce_consistent_e() 1 7.996e-05 9.195e-05 0.0001044 0.00% FabArrayBase::getCPC() 41 6.607e-05 7.62e-05 8.406e-05 0.00% Amr::writeSmallPlotFile() 1 2.649e-05 6.058e-05 7.13e-05 0.00% Castro::finalize_advance() 10 5.613e-05 6.028e-05 6.368e-05 0.00% Castro::enforce_speed_limit() 62 2.8e-05 3.181e-05 3.565e-05 0.00% FabArrayBase::CPC::define() 2 2.209e-05 2.625e-05 3.021e-05 0.00% Castro::create_source_corrector() 10 1.413e-05 1.71e-05 1.997e-05 0.00% Gravity::swapTimeLevels() 10 1.055e-05 1.382e-05 1.662e-05 0.00% Amr::initSubcycle() 1 8.306e-06 9.554e-06 1.039e-05 0.00% Gravity::set_mass_offset() 10 6.818e-06 7.374e-06 8.087e-06 0.00% Castro::retry_advance_ctu() 10 5.179e-06 6.033e-06 7.715e-06 0.00% Castro::FluxRegFineAdd() 10 4.946e-06 6.324e-06 7.501e-06 0.00% DistributionMapping::Distribute() 1 1.065e-06 1.217e-06 1.513e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized