MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 01:53:33 UTC on 2022-04-24. Successfully read inputs file ... Castro git describe: 22.04-20-g82f3c3c31 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01302194 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.35957959 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.335953643 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.312822517 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.31363065 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315883249 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340980156 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.298451529 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291700684 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.29137427 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290294686 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009520698 seconds Ending run at 01:53:36 UTC on 2022-04-24. Run time = 3.340693035 Run time without initialization = 3.163786238 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.34 ... 3.341 ... 3.341 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1377 2.1826 2.2072 66.07% Gravity::make_radial_gravity() 21 0.3339 0.3431 0.351 10.51% Castro::do_advance_ctu() 10 0.07707 0.1028 0.1525 4.56% Castro::initData() 1 0.03904 0.07696 0.1146 3.43% Castro::estTimeStep() 21 0.01796 0.05929 0.101 3.02% FabArray::setVal() 143 0.07018 0.07428 0.07893 2.36% Castro::reset_internal_energy() 63 0.0483 0.04974 0.05183 1.55% FabArray::ParallelCopy_finish() 41 0.0319 0.03991 0.04836 1.45% StateData::FillBoundary(geom) 41 0.03862 0.04206 0.0464 1.39% Castro::normalize_species() 62 0.04307 0.04357 0.04535 1.36% FabArray::ParallelCopy_nowait() 41 0.04079 0.04253 0.04483 1.34% FillPatchIterator::Initialize 41 0.02433 0.03196 0.03513 1.05% Gravity::interpolate_monopole_grav() 21 0.02773 0.02796 0.02833 0.85% Castro::construct_new_gravity_source() 10 0.02294 0.02483 0.02659 0.80% Castro::expand_state() 10 0.01483 0.01943 0.02174 0.65% Castro::computeTemp() 63 0.01819 0.01903 0.01945 0.58% Castro::initialize_do_advance() 10 0.01405 0.01719 0.01903 0.57% MultiFab::Saxpy() 20 0.01391 0.01602 0.01734 0.52% Castro::initialize_advance() 10 0.01065 0.01266 0.01476 0.44% VisMF::Write(FabArray) 2 0.01177 0.01216 0.01429 0.43% Gravity::get_new_grav_vector() 11 0.0106 0.01168 0.01337 0.40% MultiFab::contains_nan() 20 0.01048 0.01148 0.01235 0.37% Castro::construct_old_gravity_source() 10 0.01115 0.01168 0.01221 0.37% FabArray::setDomainBndry() 41 0.00764 0.01074 0.01212 0.36% Gravity::get_old_grav_vector() 10 0.008132 0.009462 0.01143 0.34% Amr::writePlotFile() 2 0.008543 0.01073 0.01131 0.34% Amr::defBaseLevel() 1 0.006862 0.007144 0.008896 0.27% Castro::enforce_min_density() 62 0.006593 0.007019 0.007482 0.22% Castro::construct_new_source() 50 0.006327 0.006634 0.006862 0.21% StateData::define() 4 0.004497 0.00459 0.005045 0.15% Castro::swap_state_time_levels() 10 0.002954 0.003865 0.004303 0.13% main() 1 0.003441 0.003743 0.003966 0.12% Castro::finalize_do_advance() 10 0.000819 0.001165 0.001298 0.04% Amr::coarseTimeStep() 10 0.0004393 0.0005883 0.0009195 0.03% Amr::timeStep() 10 0.0001681 0.0002321 0.0005061 0.02% Amr::InitAmr() 1 0.0002619 0.0002852 0.0003616 0.01% Castro::clean_state() 62 0.0001383 0.0001496 0.0001616 0.00% StateDataPhysBCFunct::() 41 0.0001282 0.0001399 0.0001537 0.00% DistributionMapping::LeastUsedCPUs() 1 7e-06 9.101e-05 0.0001057 0.00% Amr::FinalizeInit() 1 3.285e-06 1.618e-05 9.428e-05 0.00% Castro::enforce_consistent_e() 1 7.638e-05 8.569e-05 9.336e-05 0.00% Castro::construct_old_source() 50 5.846e-05 7.285e-05 8.59e-05 0.00% FabArray::ParallelCopy() 41 6.435e-05 6.87e-05 7.72e-05 0.00% FillPatchSingleLevel 41 6.641e-05 7.183e-05 7.634e-05 0.00% Castro::subcycle_advance_ctu() 10 5.232e-05 6.215e-05 7.578e-05 0.00% Amr::writeSmallPlotFile() 1 3.123e-05 6.381e-05 7.542e-05 0.00% Castro::do_old_sources() 10 5.001e-05 6.06e-05 7.024e-05 0.00% Castro::do_new_sources() 10 5.021e-05 5.948e-05 6.564e-05 0.00% FabArrayBase::getCPC() 41 4.316e-05 5.04e-05 5.805e-05 0.00% Castro::construct_old_gravity() 10 4.3e-05 5.263e-05 5.744e-05 0.00% Castro::finalize_advance() 10 5.059e-05 5.452e-05 5.603e-05 0.00% Castro::apply_source_to_state() 20 4.216e-05 4.663e-05 5.07e-05 0.00% Castro::advance() 10 3.312e-05 3.931e-05 4.887e-05 0.00% Castro::construct_new_gravity() 10 3.968e-05 4.292e-05 4.875e-05 0.00% Castro::enforce_speed_limit() 62 3.009e-05 3.226e-05 3.427e-05 0.00% FabArrayBase::CPC::define() 2 2.292e-05 2.79e-05 3.409e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.566e-05 2.119e-05 2.943e-05 0.00% Castro::check_for_nan() 20 2.44e-05 2.603e-05 2.777e-05 0.00% Castro::create_source_corrector() 10 1.615e-05 1.788e-05 1.925e-05 0.00% Amr::initSubcycle() 1 8.141e-06 9.993e-06 1.877e-05 0.00% Gravity::swapTimeLevels() 10 1.168e-05 1.37e-05 1.582e-05 0.00% Castro::post_timestep() 10 9.287e-06 1.013e-05 1.137e-05 0.00% Gravity::set_mass_offset() 10 7.183e-06 7.962e-06 9.375e-06 0.00% Amr::initialInit() 1 1.078e-06 3.044e-06 8.765e-06 0.00% Castro::computeNewDt() 9 7.21e-06 7.791e-06 8.476e-06 0.00% Castro::FluxRegFineAdd() 10 6.223e-06 6.834e-06 7.545e-06 0.00% Castro::retry_advance_ctu() 10 5.441e-06 6.239e-06 7.494e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.575e-06 4.659e-06 6.728e-06 0.00% Amr::InitializeInit() 1 2.184e-06 3.248e-06 6.072e-06 0.00% Castro::post_init() 1 3.509e-06 4.144e-06 6.046e-06 0.00% Castro::computeInitialDt() 2 3.351e-06 4.25e-06 5.273e-06 0.00% Castro::post_regrid() 1 1.937e-06 3.208e-06 4.219e-06 0.00% Amr::init() 1 2.202e-06 2.396e-06 2.905e-06 0.00% DistributionMapping::Distribute() 1 1.007e-06 1.146e-06 1.393e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.34 3.341 3.341 100.00% Amr::coarseTimeStep() 10 3.15 3.15 3.15 94.30% Amr::timeStep() 10 3.14 3.141 3.142 94.05% Castro::advance() 10 3.125 3.125 3.125 93.55% Castro::subcycle_advance_ctu() 10 3.046 3.048 3.052 91.34% Castro::do_advance_ctu() 10 3.046 3.048 3.052 91.34% Castro::construct_ctu_hydro_source() 10 2.138 2.183 2.207 66.07% Gravity::make_radial_gravity() 21 0.3339 0.3431 0.351 10.51% Gravity::get_new_grav_vector() 11 0.2219 0.2246 0.2259 6.76% Castro::construct_old_gravity() 10 0.1985 0.2053 0.2111 6.32% Gravity::get_old_grav_vector() 10 0.1977 0.2045 0.2104 6.30% Castro::construct_new_gravity() 10 0.1967 0.1982 0.1997 5.98% Amr::init() 1 0.1764 0.1765 0.1765 5.28% FillPatchIterator::Initialize 41 0.1601 0.1676 0.1733 5.19% Castro::initialize_do_advance() 10 0.1528 0.1598 0.1654 4.95% Amr::initialInit() 1 0.1629 0.1632 0.1634 4.89% Amr::InitializeInit() 1 0.05727 0.09566 0.1332 3.99% Amr::defBaseLevel() 1 0.05726 0.09566 0.1332 3.99% FillPatchSingleLevel 41 0.1202 0.1249 0.1322 3.96% Castro::clean_state() 62 0.116 0.1186 0.1233 3.69% Castro::initData() 1 0.04302 0.08105 0.1188 3.56% Castro::expand_state() 10 0.1042 0.1107 0.1159 3.47% Amr::FinalizeInit() 1 0.02979 0.06752 0.1059 3.17% Castro::estTimeStep() 21 0.01796 0.05929 0.101 3.02% FabArray::ParallelCopy() 41 0.07632 0.08259 0.09041 2.71% Castro::initialize_advance() 10 0.07343 0.07702 0.07945 2.38% FabArray::setVal() 143 0.07018 0.07428 0.07893 2.36% Castro::computeInitialDt() 2 0.001726 0.03928 0.07759 2.32% Castro::computeTemp() 63 0.06649 0.06877 0.07116 2.13% Castro::do_new_sources() 10 0.06172 0.06556 0.06963 2.08% Castro::reset_internal_energy() 63 0.0483 0.04974 0.05183 1.55% Castro::do_old_sources() 10 0.04806 0.04907 0.04948 1.48% FabArray::ParallelCopy_finish() 41 0.0319 0.03991 0.04836 1.45% StateDataPhysBCFunct::() 41 0.03877 0.0422 0.04654 1.39% StateData::FillBoundary(geom) 41 0.03862 0.04206 0.0464 1.39% Castro::normalize_species() 62 0.04307 0.04357 0.04535 1.36% FabArray::ParallelCopy_nowait() 41 0.04087 0.0426 0.04492 1.34% Castro::construct_new_source() 50 0.02937 0.03146 0.03343 1.00% Gravity::interpolate_monopole_grav() 21 0.02773 0.02796 0.02833 0.85% Castro::post_init() 1 0.02735 0.0275 0.02771 0.83% Castro::construct_new_gravity_source() 10 0.02294 0.02483 0.02659 0.80% Amr::writePlotFile() 2 0.02269 0.02289 0.02315 0.69% Castro::apply_source_to_state() 20 0.01395 0.01607 0.01739 0.52% MultiFab::Saxpy() 20 0.01391 0.01602 0.01734 0.52% Castro::post_timestep() 10 0.01528 0.01593 0.01646 0.49% VisMF::Write(FabArray) 2 0.01177 0.01216 0.01429 0.43% Castro::check_for_nan() 20 0.01051 0.01151 0.01238 0.37% MultiFab::contains_nan() 20 0.01048 0.01148 0.01235 0.37% Castro::construct_old_source() 50 0.0112 0.01176 0.01228 0.37% Castro::construct_old_gravity_source() 10 0.01115 0.01168 0.01221 0.37% FabArray::setDomainBndry() 41 0.00764 0.01074 0.01212 0.36% Castro::computeNewDt() 9 0.006816 0.007551 0.008551 0.26% Castro::enforce_min_density() 62 0.006593 0.007019 0.007482 0.22% AmrLevel::AmrLevel(dm) 1 0.004516 0.004612 0.005066 0.15% StateData::define() 4 0.004497 0.00459 0.005045 0.15% Castro::swap_state_time_levels() 10 0.002954 0.003865 0.004303 0.13% Castro::post_regrid() 1 0.001555 0.001649 0.001911 0.06% Castro::finalize_do_advance() 10 0.000819 0.001165 0.001298 0.04% Amr::InitAmr() 1 0.0002706 0.0002952 0.0003701 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.167e-05 9.681e-05 0.0001136 0.00% DistributionMapping::LeastUsedCPUs() 1 7e-06 9.101e-05 0.0001057 0.00% Castro::enforce_consistent_e() 1 7.638e-05 8.569e-05 9.336e-05 0.00% FabArrayBase::getCPC() 41 6.761e-05 7.829e-05 9.205e-05 0.00% Amr::writeSmallPlotFile() 1 3.123e-05 6.381e-05 7.542e-05 0.00% Castro::finalize_advance() 10 5.719e-05 6.135e-05 6.311e-05 0.00% Castro::enforce_speed_limit() 62 3.009e-05 3.226e-05 3.427e-05 0.00% FabArrayBase::CPC::define() 2 2.292e-05 2.79e-05 3.409e-05 0.00% Castro::create_source_corrector() 10 1.615e-05 1.788e-05 1.925e-05 0.00% Amr::initSubcycle() 1 8.141e-06 9.993e-06 1.877e-05 0.00% Gravity::swapTimeLevels() 10 1.168e-05 1.37e-05 1.582e-05 0.00% Gravity::set_mass_offset() 10 7.183e-06 7.962e-06 9.375e-06 0.00% Castro::FluxRegFineAdd() 10 6.223e-06 6.834e-06 7.545e-06 0.00% Castro::retry_advance_ctu() 10 5.441e-06 6.239e-06 7.494e-06 0.00% DistributionMapping::Distribute() 1 1.007e-06 1.146e-06 1.393e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized