MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 17:57:40 UTC on 2022-04-24. Successfully read inputs file ... Castro git describe: 22.04-26-g070110ad7 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012805094 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.337673854 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.332407495 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.318515772 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.317945749 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.317756186 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342160766 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.295996483 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291360263 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290212653 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.291799192 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.018770711 seconds Ending run at 17:57:43 UTC on 2022-04-24. Run time = 3.332837189 Run time without initialization = 3.158585248 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.332 ... 3.332 ... 3.333 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1243 2.1856 2.2408 67.23% Gravity::make_radial_gravity() 21 0.3295 0.3406 0.3518 10.56% Castro::do_advance_ctu() 10 0.02952 0.08601 0.151 4.53% Castro::initData() 1 0.04028 0.07903 0.1147 3.44% Castro::estTimeStep() 21 0.02063 0.05863 0.09921 2.98% FabArray::setVal() 143 0.06998 0.07386 0.07872 2.36% FabArray::ParallelCopy_finish() 41 0.03262 0.03946 0.05287 1.59% Castro::reset_internal_energy() 63 0.04825 0.04967 0.05125 1.54% Castro::normalize_species() 62 0.04378 0.04429 0.04479 1.34% StateData::FillBoundary(geom) 41 0.03916 0.04196 0.04469 1.34% FabArray::ParallelCopy_nowait() 41 0.0395 0.04242 0.04402 1.32% FillPatchIterator::Initialize 41 0.02389 0.03116 0.03453 1.04% Gravity::interpolate_monopole_grav() 21 0.02739 0.02777 0.02806 0.84% Castro::construct_new_gravity_source() 10 0.02245 0.02501 0.02698 0.81% Castro::expand_state() 10 0.01453 0.01948 0.02192 0.66% Amr::writePlotFile() 2 0.01749 0.01963 0.0202 0.61% Castro::computeTemp() 63 0.01813 0.01885 0.01967 0.59% Castro::initialize_do_advance() 10 0.01391 0.01698 0.01878 0.56% MultiFab::Saxpy() 20 0.01499 0.01586 0.01666 0.50% VisMF::Write(FabArray) 2 0.01174 0.01229 0.01433 0.43% Castro::initialize_advance() 10 0.01069 0.01239 0.0142 0.43% Gravity::get_new_grav_vector() 11 0.01042 0.0117 0.014 0.42% Castro::construct_old_gravity_source() 10 0.01098 0.01184 0.01266 0.38% MultiFab::contains_nan() 20 0.01061 0.01165 0.01265 0.38% FabArray::setDomainBndry() 41 0.007643 0.01068 0.0119 0.36% Gravity::get_old_grav_vector() 10 0.008785 0.009552 0.01104 0.33% Amr::defBaseLevel() 1 0.006679 0.007015 0.007346 0.22% Castro::construct_new_source() 50 0.006368 0.006656 0.006925 0.21% Castro::enforce_min_density() 62 0.005946 0.006332 0.006549 0.20% StateData::define() 4 0.004406 0.004605 0.004702 0.14% main() 1 0.003372 0.003845 0.004351 0.13% Castro::swap_state_time_levels() 10 0.002915 0.003726 0.003867 0.12% Castro::finalize_do_advance() 10 0.0008775 0.001108 0.001216 0.04% Amr::coarseTimeStep() 10 0.0003031 0.0005961 0.0009018 0.03% Amr::InitAmr() 1 0.0002573 0.0003021 0.0004574 0.01% Amr::timeStep() 10 0.000163 0.0002257 0.0004559 0.01% DistributionMapping::LeastUsedCPUs() 1 9.576e-06 0.000202 0.0002656 0.01% StateDataPhysBCFunct::() 41 0.000131 0.000142 0.0001674 0.01% Castro::clean_state() 62 0.0001376 0.0001537 0.0001672 0.01% Castro::construct_old_source() 50 6.144e-05 7.864e-05 9.68e-05 0.00% Castro::enforce_consistent_e() 1 7.664e-05 8.673e-05 9.516e-05 0.00% FabArray::ParallelCopy() 41 6.928e-05 7.679e-05 8.172e-05 0.00% Castro::do_old_sources() 10 6.007e-05 6.819e-05 7.94e-05 0.00% FillPatchSingleLevel 41 5.965e-05 6.983e-05 7.88e-05 0.00% Amr::writeSmallPlotFile() 1 4.665e-05 6.187e-05 7.331e-05 0.00% Castro::do_new_sources() 10 6.045e-05 6.517e-05 7.12e-05 0.00% Castro::construct_old_gravity() 10 5.364e-05 5.942e-05 7.042e-05 0.00% Castro::subcycle_advance_ctu() 10 4.175e-05 5.306e-05 6.985e-05 0.00% FabArrayBase::getCPC() 41 5.387e-05 6.09e-05 6.606e-05 0.00% Amr::FinalizeInit() 1 3.527e-06 1.161e-05 6.241e-05 0.00% Castro::advance() 10 3.989e-05 4.559e-05 6.023e-05 0.00% Castro::apply_source_to_state() 20 3.844e-05 5.006e-05 5.772e-05 0.00% Castro::construct_new_gravity() 10 4.18e-05 4.977e-05 5.646e-05 0.00% Castro::finalize_advance() 10 4.931e-05 5.23e-05 5.617e-05 0.00% Castro::enforce_speed_limit() 62 2.973e-05 3.598e-05 4.579e-05 0.00% FabArrayBase::CPC::define() 2 2.156e-05 2.688e-05 4.154e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.3e-05 1.845e-05 3.1e-05 0.00% Gravity::swapTimeLevels() 10 1.297e-05 1.652e-05 2.89e-05 0.00% Castro::check_for_nan() 20 2.294e-05 2.612e-05 2.843e-05 0.00% Castro::create_source_corrector() 10 1.373e-05 1.678e-05 1.882e-05 0.00% Amr::initSubcycle() 1 8.752e-06 1.059e-05 1.76e-05 0.00% Castro::post_init() 1 2.848e-06 4.827e-06 1.206e-05 0.00% Gravity::set_mass_offset() 10 6.784e-06 8.129e-06 1.171e-05 0.00% Castro::post_timestep() 10 9.479e-06 1.016e-05 1.134e-05 0.00% Castro::computeNewDt() 9 7.037e-06 7.635e-06 8.563e-06 0.00% Amr::InitializeInit() 1 2.165e-06 3.996e-06 7.617e-06 0.00% Castro::retry_advance_ctu() 10 4.673e-06 6.062e-06 7.423e-06 0.00% Castro::FluxRegFineAdd() 10 5.328e-06 6.151e-06 7.227e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.966e-06 4.687e-06 5.789e-06 0.00% Castro::computeInitialDt() 2 2.479e-06 3.378e-06 4.52e-06 0.00% Castro::post_regrid() 1 1.923e-06 2.731e-06 3.675e-06 0.00% Amr::init() 1 1.713e-06 2.244e-06 3.411e-06 0.00% DistributionMapping::Distribute() 1 1.17e-06 1.359e-06 2.131e-06 0.00% Amr::initialInit() 1 1.115e-06 1.32e-06 1.67e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.332 3.332 3.333 100.00% Amr::coarseTimeStep() 10 3.136 3.136 3.136 94.08% Amr::timeStep() 10 3.126 3.126 3.127 93.82% Castro::advance() 10 3.11 3.11 3.11 93.32% Castro::subcycle_advance_ctu() 10 3.031 3.033 3.036 91.10% Castro::do_advance_ctu() 10 3.031 3.033 3.036 91.10% Castro::construct_ctu_hydro_source() 10 2.124 2.186 2.241 67.23% Gravity::make_radial_gravity() 21 0.3295 0.3406 0.3518 10.56% Gravity::get_new_grav_vector() 11 0.223 0.2241 0.225 6.75% Castro::construct_old_gravity() 10 0.1955 0.2039 0.2128 6.39% Gravity::get_old_grav_vector() 10 0.1945 0.2031 0.2122 6.37% Castro::construct_new_gravity() 10 0.1999 0.2006 0.2017 6.05% Amr::init() 1 0.1736 0.1738 0.1739 5.22% FillPatchIterator::Initialize 41 0.1618 0.1661 0.1727 5.18% Castro::initialize_do_advance() 10 0.1508 0.1578 0.1631 4.89% Amr::initialInit() 1 0.1606 0.1608 0.1609 4.83% FillPatchSingleLevel 41 0.1191 0.1242 0.1342 4.03% Amr::InitializeInit() 1 0.05925 0.09775 0.1337 4.01% Amr::defBaseLevel() 1 0.05925 0.09774 0.1337 4.01% Castro::clean_state() 62 0.1169 0.1184 0.1209 3.63% Castro::initData() 1 0.04415 0.08305 0.1185 3.56% Castro::expand_state() 10 0.1032 0.1093 0.1143 3.43% Amr::FinalizeInit() 1 0.02701 0.06302 0.1016 3.05% Castro::estTimeStep() 21 0.02063 0.05863 0.09921 2.98% FabArray::ParallelCopy() 41 0.07564 0.08205 0.09253 2.78% Castro::initialize_advance() 10 0.07375 0.07664 0.07901 2.37% FabArray::setVal() 143 0.06998 0.07386 0.07872 2.36% Castro::computeInitialDt() 2 0.001695 0.03771 0.07624 2.29% Castro::computeTemp() 63 0.06704 0.06852 0.07092 2.13% Castro::do_new_sources() 10 0.06149 0.06547 0.0694 2.08% FabArray::ParallelCopy_finish() 41 0.03262 0.03946 0.05287 1.59% Castro::reset_internal_energy() 63 0.04825 0.04967 0.05125 1.54% Castro::do_old_sources() 10 0.04799 0.04892 0.04943 1.48% StateDataPhysBCFunct::() 41 0.0393 0.0421 0.04482 1.34% Castro::normalize_species() 62 0.04378 0.04429 0.04479 1.34% StateData::FillBoundary(geom) 41 0.03916 0.04196 0.04469 1.34% FabArray::ParallelCopy_nowait() 41 0.03958 0.04251 0.04412 1.32% Castro::construct_new_source() 50 0.02891 0.03167 0.03381 1.01% Amr::writePlotFile() 2 0.03182 0.03193 0.03208 0.96% Gravity::interpolate_monopole_grav() 21 0.02739 0.02777 0.02806 0.84% Castro::construct_new_gravity_source() 10 0.02245 0.02501 0.02698 0.81% Castro::post_init() 1 0.02449 0.0246 0.02468 0.74% Castro::post_timestep() 10 0.01557 0.01604 0.01677 0.50% Castro::apply_source_to_state() 20 0.01503 0.01591 0.01672 0.50% MultiFab::Saxpy() 20 0.01499 0.01586 0.01666 0.50% VisMF::Write(FabArray) 2 0.01174 0.01229 0.01433 0.43% Castro::construct_old_source() 50 0.01104 0.01192 0.01274 0.38% Castro::check_for_nan() 20 0.01064 0.01168 0.01268 0.38% Castro::construct_old_gravity_source() 10 0.01098 0.01184 0.01266 0.38% MultiFab::contains_nan() 20 0.01061 0.01165 0.01265 0.38% FabArray::setDomainBndry() 41 0.007643 0.01068 0.0119 0.36% Castro::computeNewDt() 9 0.006968 0.007676 0.008333 0.25% Castro::enforce_min_density() 62 0.005946 0.006332 0.006549 0.20% AmrLevel::AmrLevel(dm) 1 0.004419 0.004624 0.004723 0.14% StateData::define() 4 0.004406 0.004605 0.004702 0.14% Castro::swap_state_time_levels() 10 0.002915 0.003726 0.003867 0.12% Castro::post_regrid() 1 0.001583 0.001624 0.00168 0.05% Castro::finalize_do_advance() 10 0.0008775 0.001108 0.001216 0.04% Amr::InitAmr() 1 0.000266 0.0003127 0.0004674 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.578e-05 0.000208 0.0002723 0.01% DistributionMapping::LeastUsedCPUs() 1 9.576e-06 0.000202 0.0002656 0.01% FabArrayBase::getCPC() 41 8.077e-05 8.778e-05 0.0001028 0.00% Castro::enforce_consistent_e() 1 7.664e-05 8.673e-05 9.516e-05 0.00% Amr::writeSmallPlotFile() 1 4.665e-05 6.187e-05 7.331e-05 0.00% Castro::finalize_advance() 10 5.511e-05 5.845e-05 6.34e-05 0.00% Castro::enforce_speed_limit() 62 2.973e-05 3.598e-05 4.579e-05 0.00% FabArrayBase::CPC::define() 2 2.156e-05 2.688e-05 4.154e-05 0.00% Gravity::swapTimeLevels() 10 1.297e-05 1.652e-05 2.89e-05 0.00% Castro::create_source_corrector() 10 1.373e-05 1.678e-05 1.882e-05 0.00% Amr::initSubcycle() 1 8.752e-06 1.059e-05 1.76e-05 0.00% Gravity::set_mass_offset() 10 6.784e-06 8.129e-06 1.171e-05 0.00% Castro::retry_advance_ctu() 10 4.673e-06 6.062e-06 7.423e-06 0.00% Castro::FluxRegFineAdd() 10 5.328e-06 6.151e-06 7.227e-06 0.00% DistributionMapping::Distribute() 1 1.17e-06 1.359e-06 2.131e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized