MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 00:37:35 UTC on 2022-04-25. Successfully read inputs file ... Castro git describe: 22.04-28-gfd2c87307 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013091254 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.361357902 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.369375728 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.345182775 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312107093 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.312964907 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.334560826 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297933373 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.291239649 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291631819 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.292673485 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009941406 seconds Ending run at 00:37:39 UTC on 2022-04-25. Run time = 3.397543879 Run time without initialization = 3.222640872 Average number of zones advanced per microsecond: 0.813 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.397 ... 3.397 ... 3.398 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1698 2.1973 2.2500 66.22% Gravity::make_radial_gravity() 21 0.3402 0.3507 0.3631 10.69% Castro::do_advance_ctu() 10 0.07828 0.1301 0.1595 4.69% Castro::initData() 1 0.03821 0.07729 0.1156 3.40% Castro::estTimeStep() 21 0.0166 0.05918 0.1018 3.00% FabArray::setVal() 143 0.07056 0.07451 0.08037 2.37% FabArray::ParallelCopy_finish() 41 0.03442 0.04894 0.05534 1.63% Castro::reset_internal_energy() 63 0.0475 0.04974 0.05231 1.54% Castro::normalize_species() 62 0.04346 0.04449 0.04584 1.35% FabArray::ParallelCopy_nowait() 41 0.03754 0.04119 0.04394 1.29% StateData::FillBoundary(geom) 41 0.03897 0.04193 0.04351 1.28% FillPatchIterator::Initialize 41 0.02436 0.03141 0.03567 1.05% Gravity::interpolate_monopole_grav() 21 0.02708 0.02804 0.02921 0.86% Castro::construct_new_gravity_source() 10 0.02264 0.02389 0.02506 0.74% Castro::expand_state() 10 0.01396 0.0198 0.02208 0.65% Castro::computeTemp() 63 0.01782 0.01867 0.01968 0.58% Castro::initialize_do_advance() 10 0.01619 0.01741 0.01837 0.54% MultiFab::Saxpy() 20 0.01479 0.0162 0.01753 0.52% VisMF::Write(FabArray) 2 0.01218 0.01264 0.01472 0.43% Castro::initialize_advance() 10 0.01053 0.01233 0.0144 0.42% Castro::construct_old_gravity_source() 10 0.0104 0.01146 0.01289 0.38% Gravity::get_new_grav_vector() 11 0.01059 0.01143 0.01281 0.38% MultiFab::contains_nan() 20 0.01059 0.01145 0.01249 0.37% FabArray::setDomainBndry() 41 0.007754 0.01042 0.01173 0.35% Amr::writePlotFile() 2 0.008546 0.01064 0.0112 0.33% Gravity::get_old_grav_vector() 10 0.008842 0.009654 0.01107 0.33% Amr::defBaseLevel() 1 0.006696 0.007128 0.007576 0.22% Castro::enforce_min_density() 62 0.00649 0.006879 0.007164 0.21% Castro::construct_new_source() 50 0.006386 0.006624 0.006813 0.20% StateData::define() 4 0.004409 0.00461 0.004839 0.14% main() 1 0.003298 0.003764 0.004055 0.12% Castro::swap_state_time_levels() 10 0.002956 0.003792 0.003932 0.12% Castro::finalize_do_advance() 10 0.0008929 0.001115 0.001232 0.04% Amr::coarseTimeStep() 10 0.0003516 0.0006078 0.001 0.03% Amr::timeStep() 10 0.0001762 0.000228 0.0004371 0.01% Amr::InitAmr() 1 0.0002741 0.0003022 0.0004245 0.01% DistributionMapping::LeastUsedCPUs() 1 7.062e-06 0.0001423 0.000175 0.01% StateDataPhysBCFunct::() 41 0.0001138 0.0001327 0.0001576 0.00% Castro::clean_state() 62 0.0001292 0.0001402 0.0001524 0.00% Amr::FinalizeInit() 1 3.953e-06 1.785e-05 0.0001087 0.00% Castro::enforce_consistent_e() 1 8.025e-05 8.54e-05 9.318e-05 0.00% FabArray::ParallelCopy() 41 5.831e-05 7.268e-05 9.151e-05 0.00% Castro::construct_old_source() 50 5.853e-05 6.796e-05 7.592e-05 0.00% FillPatchSingleLevel 41 5.784e-05 6.563e-05 7.28e-05 0.00% Castro::do_old_sources() 10 4.683e-05 5.797e-05 6.884e-05 0.00% Castro::subcycle_advance_ctu() 10 3.646e-05 5.494e-05 6.668e-05 0.00% Castro::do_new_sources() 10 5.196e-05 5.923e-05 6.622e-05 0.00% Amr::writeSmallPlotFile() 1 2.647e-05 5.236e-05 6.606e-05 0.00% Castro::construct_old_gravity() 10 4.78e-05 5.384e-05 6.104e-05 0.00% Castro::finalize_advance() 10 5.096e-05 5.339e-05 5.612e-05 0.00% Castro::apply_source_to_state() 20 3.824e-05 4.399e-05 5.485e-05 0.00% Castro::construct_new_gravity() 10 4.337e-05 4.512e-05 4.926e-05 0.00% FabArrayBase::getCPC() 41 4.177e-05 4.491e-05 4.91e-05 0.00% Castro::advance() 10 3.117e-05 3.69e-05 4.245e-05 0.00% Castro::enforce_speed_limit() 62 2.685e-05 3.163e-05 3.941e-05 0.00% FabArrayBase::CPC::define() 2 2.339e-05 2.641e-05 3.087e-05 0.00% Gravity::swapTimeLevels() 10 1.008e-05 1.579e-05 2.649e-05 0.00% Castro::check_for_nan() 20 2.178e-05 2.283e-05 2.446e-05 0.00% Castro::create_source_corrector() 10 1.435e-05 1.729e-05 2.239e-05 0.00% Castro::post_init() 1 9.249e-06 1.122e-05 1.578e-05 0.00% Amr::initSubcycle() 1 8.804e-06 1.001e-05 1.441e-05 0.00% Castro::post_timestep() 10 7.783e-06 9.116e-06 1.322e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.322e-06 8.792e-06 1.127e-05 0.00% Castro::computeNewDt() 9 6.131e-06 7.465e-06 8.866e-06 0.00% Gravity::set_mass_offset() 10 6.632e-06 7.533e-06 8.743e-06 0.00% Amr::InitializeInit() 1 2.23e-06 3.125e-06 7.322e-06 0.00% Castro::FluxRegFineAdd() 10 5.521e-06 5.942e-06 6.885e-06 0.00% Castro::retry_advance_ctu() 10 5.034e-06 5.796e-06 6.863e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.082e-06 5.067e-06 6.747e-06 0.00% Castro::computeInitialDt() 2 2.722e-06 3.619e-06 4.23e-06 0.00% Castro::post_regrid() 1 2.101e-06 2.811e-06 3.584e-06 0.00% Amr::init() 1 2.009e-06 2.348e-06 2.67e-06 0.00% Amr::initialInit() 1 1.266e-06 1.572e-06 1.881e-06 0.00% DistributionMapping::Distribute() 1 1.048e-06 1.219e-06 1.538e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.397 3.397 3.398 100.00% Amr::coarseTimeStep() 10 3.209 3.209 3.209 94.44% Amr::timeStep() 10 3.199 3.2 3.2 94.19% Castro::advance() 10 3.183 3.183 3.184 93.70% Castro::subcycle_advance_ctu() 10 3.104 3.107 3.11 91.52% Castro::do_advance_ctu() 10 3.104 3.107 3.11 91.52% Castro::construct_ctu_hydro_source() 10 2.17 2.197 2.25 66.22% Gravity::make_radial_gravity() 21 0.3402 0.3507 0.3631 10.69% Castro::construct_old_gravity() 10 0.2124 0.2197 0.2333 6.87% Gravity::get_old_grav_vector() 10 0.2115 0.2189 0.2326 6.85% Gravity::get_new_grav_vector() 11 0.2188 0.2213 0.2229 6.56% Castro::construct_new_gravity() 10 0.196 0.1981 0.1992 5.86% FillPatchIterator::Initialize 41 0.1607 0.1742 0.1847 5.44% Amr::init() 1 0.1743 0.1745 0.1745 5.14% Castro::initialize_do_advance() 10 0.1477 0.1586 0.1644 4.84% Amr::initialInit() 1 0.161 0.1612 0.1613 4.75% FillPatchSingleLevel 41 0.1215 0.1324 0.1401 4.12% Amr::InitializeInit() 1 0.0562 0.09578 0.1346 3.96% Amr::defBaseLevel() 1 0.0562 0.09578 0.1346 3.96% Castro::clean_state() 62 0.1146 0.119 0.124 3.65% Castro::initData() 1 0.04243 0.08128 0.1193 3.51% Castro::expand_state() 10 0.09823 0.1091 0.1157 3.40% Amr::FinalizeInit() 1 0.0264 0.06541 0.1049 3.09% Castro::estTimeStep() 21 0.0166 0.05918 0.1018 3.00% FabArray::ParallelCopy() 41 0.0785 0.09027 0.09704 2.86% FabArray::setVal() 143 0.07056 0.07451 0.08037 2.37% Castro::computeInitialDt() 2 0.001636 0.04044 0.08005 2.36% Castro::initialize_advance() 10 0.07364 0.07608 0.07947 2.34% Castro::computeTemp() 63 0.06538 0.0684 0.072 2.12% Castro::do_new_sources() 10 0.0617 0.06443 0.06753 1.99% Castro::do_old_sources() 10 0.04543 0.05042 0.05676 1.67% FabArray::ParallelCopy_finish() 41 0.03442 0.04894 0.05534 1.63% Castro::reset_internal_energy() 63 0.0475 0.04974 0.05231 1.54% Castro::normalize_species() 62 0.04346 0.04449 0.04584 1.35% FabArray::ParallelCopy_nowait() 41 0.03762 0.04126 0.04402 1.30% StateDataPhysBCFunct::() 41 0.03909 0.04206 0.04365 1.28% StateData::FillBoundary(geom) 41 0.03897 0.04193 0.04351 1.28% Castro::construct_new_source() 50 0.02914 0.03051 0.03184 0.94% Gravity::interpolate_monopole_grav() 21 0.02708 0.02804 0.02921 0.86% Castro::construct_new_gravity_source() 10 0.02264 0.02389 0.02506 0.74% Castro::post_init() 1 0.02414 0.02427 0.02442 0.72% Amr::writePlotFile() 2 0.02315 0.02328 0.02349 0.69% Castro::apply_source_to_state() 20 0.01483 0.01624 0.01757 0.52% MultiFab::Saxpy() 20 0.01479 0.0162 0.01753 0.52% Castro::post_timestep() 10 0.01546 0.016 0.01652 0.49% VisMF::Write(FabArray) 2 0.01218 0.01264 0.01472 0.43% Castro::construct_old_source() 50 0.01047 0.01153 0.01296 0.38% Castro::construct_old_gravity_source() 10 0.0104 0.01146 0.01289 0.38% Castro::check_for_nan() 20 0.01061 0.01148 0.01251 0.37% MultiFab::contains_nan() 20 0.01059 0.01145 0.01249 0.37% FabArray::setDomainBndry() 41 0.007754 0.01042 0.01173 0.35% Castro::computeNewDt() 9 0.006916 0.007519 0.008081 0.24% Castro::enforce_min_density() 62 0.00649 0.006879 0.007164 0.21% AmrLevel::AmrLevel(dm) 1 0.004419 0.004619 0.004849 0.14% StateData::define() 4 0.004409 0.00461 0.004839 0.14% Castro::swap_state_time_levels() 10 0.002956 0.003792 0.003932 0.12% Castro::post_regrid() 1 0.001551 0.001613 0.001692 0.05% Castro::finalize_do_advance() 10 0.0008929 0.001115 0.001232 0.04% Amr::InitAmr() 1 0.0002831 0.0003122 0.000434 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.281e-05 0.0001485 0.0001826 0.01% DistributionMapping::LeastUsedCPUs() 1 7.062e-06 0.0001423 0.000175 0.01% Castro::enforce_consistent_e() 1 8.025e-05 8.54e-05 9.318e-05 0.00% FabArrayBase::getCPC() 41 6.676e-05 7.132e-05 7.878e-05 0.00% Amr::writeSmallPlotFile() 1 2.647e-05 5.236e-05 6.606e-05 0.00% Castro::finalize_advance() 10 5.667e-05 5.933e-05 6.3e-05 0.00% Castro::enforce_speed_limit() 62 2.685e-05 3.163e-05 3.941e-05 0.00% FabArrayBase::CPC::define() 2 2.339e-05 2.641e-05 3.087e-05 0.00% Gravity::swapTimeLevels() 10 1.008e-05 1.579e-05 2.649e-05 0.00% Castro::create_source_corrector() 10 1.435e-05 1.729e-05 2.239e-05 0.00% Amr::initSubcycle() 1 8.804e-06 1.001e-05 1.441e-05 0.00% Gravity::set_mass_offset() 10 6.632e-06 7.533e-06 8.743e-06 0.00% Castro::FluxRegFineAdd() 10 5.521e-06 5.942e-06 6.885e-06 0.00% Castro::retry_advance_ctu() 10 5.034e-06 5.796e-06 6.863e-06 0.00% DistributionMapping::Distribute() 1 1.048e-06 1.219e-06 1.538e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized