MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-28-g56661522b4cd) initialized Starting run at 16:03:46 UTC on 2022-04-24. Successfully read inputs file ... Castro git describe: 22.04-22-ge0c20f915 AMReX git describe: 22.04-28-g56661522b Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013245722 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.348963578 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334723782 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.313811846 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.311467631 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314056206 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340163307 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296526887 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.29370681 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.293806696 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.294427 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009343639 seconds Ending run at 16:03:50 UTC on 2022-04-24. Run time = 3.388216978 Run time without initialization = 3.154155486 Average number of zones advanced per microsecond: 0.831 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.388 ... 3.388 ... 3.388 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1288 2.1770 2.2291 65.79% Gravity::make_radial_gravity() 21 0.3348 0.3515 0.3678 10.85% Castro::initData() 1 0.03955 0.09637 0.1628 4.80% Castro::estTimeStep() 21 0.01787 0.09184 0.147 4.34% Castro::do_advance_ctu() 10 0.04638 0.1003 0.1468 4.33% FabArray::ParallelCopy_finish() 41 0.03453 0.04873 0.08517 2.51% FabArray::setVal() 143 0.06098 0.06909 0.07427 2.19% Castro::reset_internal_energy() 63 0.04713 0.05007 0.0542 1.60% StateData::FillBoundary(geom) 41 0.04008 0.04211 0.04598 1.36% FabArray::ParallelCopy_nowait() 41 0.0354 0.04114 0.04532 1.34% Castro::normalize_species() 62 0.04189 0.04323 0.0448 1.32% FillPatchIterator::Initialize 41 0.02406 0.03137 0.03545 1.05% Gravity::interpolate_monopole_grav() 21 0.02784 0.02807 0.02833 0.84% Castro::construct_new_gravity_source() 10 0.02032 0.02339 0.02646 0.78% Castro::expand_state() 10 0.01176 0.01864 0.02166 0.64% Castro::computeTemp() 63 0.01713 0.01909 0.02119 0.63% Castro::initialize_do_advance() 10 0.01053 0.01621 0.01804 0.53% Castro::construct_old_gravity_source() 10 0.007165 0.01178 0.01734 0.51% MultiFab::Saxpy() 20 0.01281 0.01486 0.01625 0.48% VisMF::Write(FabArray) 2 0.0119 0.01238 0.01447 0.43% Castro::initialize_advance() 10 0.008059 0.0115 0.01394 0.41% Gravity::get_new_grav_vector() 11 0.009915 0.01122 0.01364 0.40% MultiFab::contains_nan() 20 0.01014 0.01129 0.01311 0.39% FabArray::setDomainBndry() 41 0.007077 0.009907 0.0116 0.34% Amr::writePlotFile() 2 0.008336 0.0103 0.01072 0.32% Gravity::get_old_grav_vector() 10 0.006949 0.009068 0.01017 0.30% Amr::defBaseLevel() 1 0.006581 0.008302 0.009934 0.29% Castro::enforce_min_density() 62 0.006489 0.006715 0.007049 0.21% Castro::construct_new_source() 50 0.005796 0.006401 0.006693 0.20% StateData::define() 4 0.004321 0.00541 0.006431 0.19% main() 1 0.003607 0.003758 0.003923 0.12% Castro::swap_state_time_levels() 10 0.002808 0.003557 0.003799 0.11% Amr::coarseTimeStep() 10 0.000297 0.0005557 0.001209 0.04% Castro::finalize_do_advance() 10 0.0004624 0.0009173 0.001068 0.03% Amr::InitAmr() 1 0.0002806 0.0003843 0.0004663 0.01% Amr::timeStep() 10 0.0001683 0.0002253 0.000439 0.01% DistributionMapping::LeastUsedCPUs() 1 9.779e-06 0.000106 0.0002203 0.01% StateDataPhysBCFunct::() 41 0.0001137 0.0001334 0.0001636 0.00% Castro::clean_state() 62 0.0001276 0.0001383 0.0001542 0.00% Castro::enforce_consistent_e() 1 8.129e-05 9.688e-05 0.0001253 0.00% Castro::construct_old_source() 50 4.787e-05 7.422e-05 8.951e-05 0.00% FabArray::ParallelCopy() 41 5.757e-05 7.117e-05 8.81e-05 0.00% Amr::FinalizeInit() 1 3.988e-06 1.456e-05 8.024e-05 0.00% FillPatchSingleLevel 41 5.647e-05 6.697e-05 7.811e-05 0.00% Castro::subcycle_advance_ctu() 10 3.876e-05 5.907e-05 7.054e-05 0.00% Castro::do_old_sources() 10 4.029e-05 5.631e-05 7.022e-05 0.00% Amr::writeSmallPlotFile() 1 2.508e-05 5.407e-05 6.854e-05 0.00% Castro::do_new_sources() 10 4.447e-05 5.327e-05 6.609e-05 0.00% FabArrayBase::getCPC() 41 4.452e-05 5.393e-05 6.237e-05 0.00% Castro::finalize_advance() 10 5.192e-05 5.538e-05 6.044e-05 0.00% Castro::advance() 10 3.163e-05 3.988e-05 5.979e-05 0.00% Castro::construct_old_gravity() 10 4.515e-05 5.029e-05 5.692e-05 0.00% Castro::apply_source_to_state() 20 3.783e-05 4.489e-05 5.584e-05 0.00% Castro::construct_new_gravity() 10 3.781e-05 4.326e-05 5.014e-05 0.00% Castro::enforce_speed_limit() 62 2.897e-05 3.358e-05 3.998e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.631e-05 2.953e-05 3.87e-05 0.00% FabArrayBase::CPC::define() 2 2.332e-05 2.689e-05 3.405e-05 0.00% Castro::check_for_nan() 20 2.149e-05 2.258e-05 2.394e-05 0.00% Castro::create_source_corrector() 10 1.238e-05 1.591e-05 1.873e-05 0.00% Amr::initSubcycle() 1 8.607e-06 1.175e-05 1.475e-05 0.00% Gravity::swapTimeLevels() 10 9.366e-06 1.131e-05 1.326e-05 0.00% Castro::retry_advance_ctu() 10 6.86e-06 9.961e-06 1.293e-05 0.00% Castro::post_timestep() 10 8.797e-06 9.913e-06 1.116e-05 0.00% Amr::InitializeInit() 1 2.353e-06 5.354e-06 9.972e-06 0.00% Gravity::set_mass_offset() 10 6.622e-06 7.861e-06 9.488e-06 0.00% Castro::computeNewDt() 9 6.45e-06 7.467e-06 8.603e-06 0.00% Castro::FluxRegFineAdd() 10 5.665e-06 6.576e-06 8.238e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.06e-06 5.484e-06 6.754e-06 0.00% Castro::post_init() 1 3.613e-06 4.565e-06 6.097e-06 0.00% Castro::computeInitialDt() 2 3.038e-06 4.132e-06 4.814e-06 0.00% Castro::post_regrid() 1 1.617e-06 3.459e-06 4.688e-06 0.00% Amr::init() 1 2.195e-06 2.464e-06 2.958e-06 0.00% Amr::initialInit() 1 1.293e-06 1.482e-06 1.771e-06 0.00% DistributionMapping::Distribute() 1 1.111e-06 1.282e-06 1.483e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.388 3.388 3.388 100.00% Amr::coarseTimeStep() 10 3.141 3.141 3.141 92.70% Amr::timeStep() 10 3.131 3.132 3.133 92.45% Castro::advance() 10 3.116 3.116 3.116 91.97% Castro::subcycle_advance_ctu() 10 3.04 3.043 3.052 90.08% Castro::do_advance_ctu() 10 3.04 3.043 3.052 90.08% Castro::construct_ctu_hydro_source() 10 2.129 2.177 2.229 65.79% Gravity::make_radial_gravity() 21 0.3348 0.3515 0.3678 10.85% Amr::init() 1 0.2334 0.2335 0.2337 6.90% Gravity::get_new_grav_vector() 11 0.2294 0.2305 0.2317 6.84% Castro::construct_old_gravity() 10 0.1938 0.206 0.2209 6.52% Amr::initialInit() 1 0.22 0.2203 0.2205 6.51% Gravity::get_old_grav_vector() 10 0.1929 0.2053 0.2202 6.50% Castro::construct_new_gravity() 10 0.1987 0.1992 0.2002 5.91% FillPatchIterator::Initialize 41 0.1637 0.1736 0.1945 5.74% Amr::InitializeInit() 1 0.05629 0.1165 0.1854 5.47% Amr::defBaseLevel() 1 0.05629 0.1165 0.1854 5.47% Castro::initData() 1 0.04331 0.1006 0.1667 4.92% Amr::FinalizeInit() 1 0.03483 0.1038 0.1639 4.84% FillPatchSingleLevel 41 0.1184 0.1323 0.1629 4.81% Castro::initialize_do_advance() 10 0.1498 0.1565 0.1616 4.77% Castro::estTimeStep() 21 0.01787 0.09184 0.147 4.34% Castro::computeInitialDt() 2 0.001644 0.07062 0.1309 3.86% Castro::clean_state() 62 0.1125 0.1182 0.1256 3.71% FabArray::ParallelCopy() 41 0.07589 0.09002 0.1207 3.56% Castro::expand_state() 10 0.1028 0.109 0.1141 3.37% FabArray::ParallelCopy_finish() 41 0.03453 0.04873 0.08517 2.51% Castro::initialize_advance() 10 0.06325 0.07265 0.07613 2.25% Castro::computeTemp() 63 0.06426 0.06916 0.0754 2.23% FabArray::setVal() 143 0.06098 0.06909 0.07427 2.19% Castro::do_new_sources() 10 0.05786 0.06239 0.0673 1.99% Castro::do_old_sources() 10 0.04023 0.04883 0.0571 1.69% Castro::reset_internal_energy() 63 0.04713 0.05007 0.0542 1.60% StateDataPhysBCFunct::() 41 0.04022 0.04224 0.0461 1.36% StateData::FillBoundary(geom) 41 0.04008 0.04211 0.04598 1.36% FabArray::ParallelCopy_nowait() 41 0.03549 0.04122 0.0454 1.34% Castro::normalize_species() 62 0.04189 0.04323 0.0448 1.32% Castro::construct_new_source() 50 0.02611 0.0298 0.03313 0.98% Castro::post_init() 1 0.03124 0.03219 0.03264 0.96% Gravity::interpolate_monopole_grav() 21 0.02784 0.02807 0.02833 0.84% Castro::construct_new_gravity_source() 10 0.02032 0.02339 0.02646 0.78% Amr::writePlotFile() 2 0.02254 0.02269 0.02286 0.67% Castro::construct_old_source() 50 0.007212 0.01185 0.01741 0.51% Castro::construct_old_gravity_source() 10 0.007165 0.01178 0.01734 0.51% Castro::apply_source_to_state() 20 0.01285 0.0149 0.01629 0.48% MultiFab::Saxpy() 20 0.01281 0.01486 0.01625 0.48% Castro::post_timestep() 10 0.01508 0.01562 0.01617 0.48% VisMF::Write(FabArray) 2 0.0119 0.01238 0.01447 0.43% Castro::check_for_nan() 20 0.01016 0.01132 0.01314 0.39% MultiFab::contains_nan() 20 0.01014 0.01129 0.01311 0.39% FabArray::setDomainBndry() 41 0.007077 0.009907 0.0116 0.34% Castro::computeNewDt() 9 0.006803 0.007493 0.008224 0.24% Castro::enforce_min_density() 62 0.006489 0.006715 0.007049 0.21% AmrLevel::AmrLevel(dm) 1 0.004354 0.005439 0.00647 0.19% StateData::define() 4 0.004321 0.00541 0.006431 0.19% Castro::swap_state_time_levels() 10 0.002808 0.003557 0.003799 0.11% Castro::post_regrid() 1 0.001517 0.001881 0.00283 0.08% Castro::finalize_do_advance() 10 0.0004624 0.0009173 0.001068 0.03% Amr::InitAmr() 1 0.0002892 0.000396 0.0004806 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.611e-05 0.0001128 0.0002282 0.01% DistributionMapping::LeastUsedCPUs() 1 9.779e-06 0.000106 0.0002203 0.01% Castro::enforce_consistent_e() 1 8.129e-05 9.688e-05 0.0001253 0.00% FabArrayBase::getCPC() 41 7.09e-05 8.081e-05 8.744e-05 0.00% Castro::finalize_advance() 10 5.791e-05 6.196e-05 6.867e-05 0.00% Amr::writeSmallPlotFile() 1 2.508e-05 5.407e-05 6.854e-05 0.00% Castro::enforce_speed_limit() 62 2.897e-05 3.358e-05 3.998e-05 0.00% FabArrayBase::CPC::define() 2 2.332e-05 2.689e-05 3.405e-05 0.00% Castro::create_source_corrector() 10 1.238e-05 1.591e-05 1.873e-05 0.00% Amr::initSubcycle() 1 8.607e-06 1.175e-05 1.475e-05 0.00% Gravity::swapTimeLevels() 10 9.366e-06 1.131e-05 1.326e-05 0.00% Castro::retry_advance_ctu() 10 6.86e-06 9.961e-06 1.293e-05 0.00% Gravity::set_mass_offset() 10 6.622e-06 7.861e-06 9.488e-06 0.00% Castro::FluxRegFineAdd() 10 5.665e-06 6.576e-06 8.238e-06 0.00% DistributionMapping::Distribute() 1 1.111e-06 1.282e-06 1.483e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-28-g56661522b4cd) finalized