MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-29-g329f81b889a6) initialized Starting run at 05:37:29 UTC on 2022-04-26. Successfully read inputs file ... Castro git describe: 22.04-28-g7e86dbe56 AMReX git describe: 22.04-29-g329f81b88 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012910803 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.336529244 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.34442819 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.316449795 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.312946905 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.313123091 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.339730813 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.296511638 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.289584487 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.291166216 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.291293437 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.02342703 seconds Ending run at 05:37:33 UTC on 2022-04-26. Run time = 3.352011479 Run time without initialization = 3.158868572 Average number of zones advanced per microsecond: 0.830 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.351 ... 3.352 ... 3.352 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1131 2.1813 2.2259 66.40% Gravity::make_radial_gravity() 21 0.3314 0.3416 0.3489 10.41% Castro::do_advance_ctu() 10 0.04065 0.08644 0.1582 4.72% Castro::initData() 1 0.04143 0.08678 0.1304 3.89% Castro::estTimeStep() 21 0.01888 0.06939 0.1208 3.60% FabArray::setVal() 143 0.06883 0.07296 0.0775 2.31% FabArray::ParallelCopy_finish() 41 0.03206 0.0396 0.05524 1.65% Castro::reset_internal_energy() 63 0.04694 0.04927 0.05062 1.51% StateData::FillBoundary(geom) 41 0.03886 0.041 0.04536 1.35% FabArray::ParallelCopy_nowait() 41 0.041 0.04241 0.04433 1.32% Castro::normalize_species() 62 0.04376 0.04392 0.04426 1.32% FillPatchIterator::Initialize 41 0.02389 0.03165 0.03529 1.05% Gravity::interpolate_monopole_grav() 21 0.02742 0.02769 0.02814 0.84% Castro::construct_new_gravity_source() 10 0.02333 0.02491 0.02664 0.79% Amr::writePlotFile() 2 0.02285 0.02469 0.02525 0.75% Castro::expand_state() 10 0.01439 0.01901 0.02195 0.65% Castro::computeTemp() 63 0.01797 0.01861 0.01927 0.57% Castro::initialize_do_advance() 10 0.01177 0.01645 0.01865 0.56% MultiFab::Saxpy() 20 0.01506 0.01602 0.0168 0.50% Castro::initialize_advance() 10 0.01083 0.01262 0.01452 0.43% VisMF::Write(FabArray) 2 0.01127 0.01168 0.01372 0.41% Gravity::get_new_grav_vector() 11 0.01012 0.01152 0.01341 0.40% MultiFab::contains_nan() 20 0.01087 0.01172 0.01281 0.38% Castro::construct_old_gravity_source() 10 0.01021 0.0118 0.0126 0.38% FabArray::setDomainBndry() 41 0.008123 0.01068 0.01217 0.36% Gravity::get_old_grav_vector() 10 0.008079 0.0094 0.01069 0.32% Amr::defBaseLevel() 1 0.006577 0.008591 0.01049 0.31% Castro::construct_new_source() 50 0.006399 0.00667 0.006936 0.21% StateData::define() 4 0.004438 0.00563 0.006885 0.21% Castro::enforce_min_density() 62 0.005944 0.006333 0.006648 0.20% main() 1 0.003487 0.003847 0.004087 0.12% Castro::swap_state_time_levels() 10 0.002966 0.00379 0.003941 0.12% Castro::finalize_do_advance() 10 0.000823 0.00111 0.001255 0.04% Amr::coarseTimeStep() 10 0.0003216 0.0005878 0.001144 0.03% Amr::InitAmr() 1 0.0002697 0.0004031 0.0005083 0.02% Amr::timeStep() 10 0.0001561 0.0002211 0.0004423 0.01% DistributionMapping::LeastUsedCPUs() 1 1.586e-05 0.000146 0.0003033 0.01% Castro::clean_state() 62 0.0001354 0.0001524 0.0001752 0.01% StateDataPhysBCFunct::() 41 0.0001199 0.0001278 0.0001464 0.00% Castro::enforce_consistent_e() 1 7.51e-05 8.659e-05 9.949e-05 0.00% Castro::construct_old_source() 50 6.889e-05 8.656e-05 9.802e-05 0.00% Amr::FinalizeInit() 1 3.491e-06 1.481e-05 8.746e-05 0.00% FabArray::ParallelCopy() 41 7.279e-05 7.695e-05 8.514e-05 0.00% FillPatchSingleLevel 41 6.671e-05 7.135e-05 7.818e-05 0.00% Castro::do_old_sources() 10 5.829e-05 6.747e-05 7.614e-05 0.00% Amr::writeSmallPlotFile() 1 2.435e-05 4.959e-05 7.41e-05 0.00% Castro::construct_old_gravity() 10 5.451e-05 6.187e-05 7.253e-05 0.00% Castro::do_new_sources() 10 5.502e-05 6.407e-05 7.126e-05 0.00% FabArrayBase::getCPC() 41 4.963e-05 5.739e-05 7.038e-05 0.00% Castro::subcycle_advance_ctu() 10 4.496e-05 5.641e-05 6.82e-05 0.00% Castro::construct_new_gravity() 10 3.9e-05 4.824e-05 5.905e-05 0.00% Castro::finalize_advance() 10 5.027e-05 5.43e-05 5.899e-05 0.00% Castro::apply_source_to_state() 20 4.363e-05 5.17e-05 5.822e-05 0.00% Castro::advance() 10 3.429e-05 4.011e-05 4.411e-05 0.00% Castro::enforce_speed_limit() 62 3.011e-05 3.259e-05 3.541e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.163e-05 2.646e-05 3.341e-05 0.00% FabArrayBase::CPC::define() 2 2.323e-05 2.743e-05 3.216e-05 0.00% Castro::computeNewDt() 9 6.896e-06 1.02e-05 2.899e-05 0.00% Castro::check_for_nan() 20 2.132e-05 2.356e-05 2.697e-05 0.00% Castro::create_source_corrector() 10 1.405e-05 1.746e-05 2.258e-05 0.00% Amr::initSubcycle() 1 9.15e-06 1.303e-05 1.669e-05 0.00% Gravity::swapTimeLevels() 10 1.215e-05 1.361e-05 1.598e-05 0.00% Castro::post_init() 1 3.079e-06 5.349e-06 1.494e-05 0.00% Castro::post_timestep() 10 7.483e-06 8.941e-06 1.038e-05 0.00% Gravity::set_mass_offset() 10 7.712e-06 8.128e-06 9.494e-06 0.00% Castro::FluxRegFineAdd() 10 5.811e-06 7.03e-06 8.838e-06 0.00% Castro::retry_advance_ctu() 10 4.73e-06 6.091e-06 7.525e-06 0.00% Amr::InitializeInit() 1 2.514e-06 3.341e-06 6.899e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.299e-06 4.981e-06 5.656e-06 0.00% Castro::post_regrid() 1 2.116e-06 3.077e-06 5.131e-06 0.00% Castro::computeInitialDt() 2 2.571e-06 3.371e-06 4.218e-06 0.00% Amr::init() 1 2.081e-06 2.405e-06 2.892e-06 0.00% Amr::initialInit() 1 1.318e-06 1.654e-06 2.194e-06 0.00% DistributionMapping::Distribute() 1 1.13e-06 1.409e-06 1.717e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.351 3.352 3.352 100.00% Amr::coarseTimeStep() 10 3.131 3.131 3.131 93.42% Amr::timeStep() 10 3.122 3.122 3.123 93.16% Castro::advance() 10 3.106 3.106 3.106 92.67% Castro::subcycle_advance_ctu() 10 3.027 3.029 3.033 90.48% Castro::do_advance_ctu() 10 3.026 3.029 3.033 90.47% Castro::construct_ctu_hydro_source() 10 2.113 2.181 2.226 66.40% Gravity::make_radial_gravity() 21 0.3314 0.3416 0.3489 10.41% Gravity::get_new_grav_vector() 11 0.2232 0.2245 0.2252 6.72% Castro::construct_old_gravity() 10 0.1962 0.2033 0.2095 6.25% Gravity::get_old_grav_vector() 10 0.1953 0.2025 0.2087 6.23% Castro::construct_new_gravity() 10 0.1999 0.2014 0.2024 6.04% Amr::init() 1 0.1924 0.1926 0.1927 5.75% Amr::initialInit() 1 0.1795 0.1797 0.1799 5.37% FillPatchIterator::Initialize 41 0.1592 0.1657 0.1697 5.06% Castro::initialize_do_advance() 10 0.1502 0.1567 0.1618 4.83% Amr::InitializeInit() 1 0.05915 0.1068 0.1531 4.57% Amr::defBaseLevel() 1 0.05914 0.1068 0.1531 4.57% FillPatchSingleLevel 41 0.1132 0.1234 0.1377 4.11% Castro::initData() 1 0.04505 0.0906 0.1342 4.00% Castro::estTimeStep() 21 0.01888 0.06939 0.1208 3.60% Amr::FinalizeInit() 1 0.0266 0.07289 0.1204 3.59% Castro::clean_state() 62 0.1151 0.1174 0.1193 3.56% Castro::expand_state() 10 0.1043 0.1091 0.113 3.37% FabArray::ParallelCopy() 41 0.07419 0.08217 0.09726 2.90% Castro::computeInitialDt() 2 0.001609 0.04804 0.09571 2.86% Castro::initialize_advance() 10 0.07317 0.0769 0.07975 2.38% FabArray::setVal() 143 0.06883 0.07296 0.0775 2.31% Castro::computeTemp() 63 0.06491 0.06788 0.06989 2.08% Castro::do_new_sources() 10 0.0613 0.0655 0.06944 2.07% FabArray::ParallelCopy_finish() 41 0.03206 0.0396 0.05524 1.65% Castro::reset_internal_energy() 63 0.04694 0.04927 0.05062 1.51% Castro::do_old_sources() 10 0.04754 0.04914 0.04982 1.49% StateDataPhysBCFunct::() 41 0.03898 0.04113 0.04548 1.36% StateData::FillBoundary(geom) 41 0.03886 0.041 0.04536 1.35% FabArray::ParallelCopy_nowait() 41 0.04109 0.04249 0.0444 1.32% Castro::normalize_species() 62 0.04376 0.04392 0.04426 1.32% Amr::writePlotFile() 2 0.03624 0.03638 0.03659 1.09% Castro::construct_new_source() 50 0.02984 0.03158 0.03337 1.00% Gravity::interpolate_monopole_grav() 21 0.02742 0.02769 0.02814 0.84% Castro::construct_new_gravity_source() 10 0.02333 0.02491 0.02664 0.79% Castro::post_init() 1 0.02391 0.02414 0.02436 0.73% Castro::apply_source_to_state() 20 0.0151 0.01607 0.01686 0.50% MultiFab::Saxpy() 20 0.01506 0.01602 0.0168 0.50% Castro::post_timestep() 10 0.01551 0.01595 0.01637 0.49% VisMF::Write(FabArray) 2 0.01127 0.01168 0.01372 0.41% Castro::check_for_nan() 20 0.01089 0.01174 0.01283 0.38% MultiFab::contains_nan() 20 0.01087 0.01172 0.01281 0.38% Castro::construct_old_source() 50 0.01028 0.01189 0.0127 0.38% Castro::construct_old_gravity_source() 10 0.01021 0.0118 0.0126 0.38% FabArray::setDomainBndry() 41 0.008123 0.01068 0.01217 0.36% Castro::computeNewDt() 9 0.006888 0.007512 0.008256 0.25% AmrLevel::AmrLevel(dm) 1 0.00445 0.005656 0.006913 0.21% StateData::define() 4 0.004438 0.00563 0.006885 0.21% Castro::enforce_min_density() 62 0.005944 0.006333 0.006648 0.20% Castro::swap_state_time_levels() 10 0.002966 0.00379 0.003941 0.12% Castro::post_regrid() 1 0.001548 0.001616 0.001657 0.05% Castro::finalize_do_advance() 10 0.000823 0.00111 0.001255 0.04% Amr::InitAmr() 1 0.0002788 0.0004162 0.0005246 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 2.206e-05 0.0001524 0.00031 0.01% DistributionMapping::LeastUsedCPUs() 1 1.586e-05 0.000146 0.0003033 0.01% Castro::enforce_consistent_e() 1 7.51e-05 8.659e-05 9.949e-05 0.00% FabArrayBase::getCPC() 41 7.286e-05 8.482e-05 9.729e-05 0.00% Amr::writeSmallPlotFile() 1 2.435e-05 4.959e-05 7.41e-05 0.00% Castro::finalize_advance() 10 5.608e-05 6.133e-05 6.638e-05 0.00% Castro::enforce_speed_limit() 62 3.011e-05 3.259e-05 3.541e-05 0.00% FabArrayBase::CPC::define() 2 2.323e-05 2.743e-05 3.216e-05 0.00% Castro::create_source_corrector() 10 1.405e-05 1.746e-05 2.258e-05 0.00% Amr::initSubcycle() 1 9.15e-06 1.303e-05 1.669e-05 0.00% Gravity::swapTimeLevels() 10 1.215e-05 1.361e-05 1.598e-05 0.00% Gravity::set_mass_offset() 10 7.712e-06 8.128e-06 9.494e-06 0.00% Castro::FluxRegFineAdd() 10 5.811e-06 7.03e-06 8.838e-06 0.00% Castro::retry_advance_ctu() 10 4.73e-06 6.091e-06 7.525e-06 0.00% DistributionMapping::Distribute() 1 1.13e-06 1.409e-06 1.717e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-29-g329f81b889a6) finalized