MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-31-gc768c36d6e08) initialized Starting run at 05:37:32 UTC on 2022-04-27. Successfully read inputs file ... Castro git describe: 22.04-32-g3e7bcd3b6 AMReX git describe: 22.04-31-gc768c36d6 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013933248 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.336374277 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.325362666 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.313874788 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313901032 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316281229 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343104815 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.301012873 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.294748522 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.294631136 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.29442259 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.02337899 seconds Ending run at 05:37:35 UTC on 2022-04-27. Run time = 3.384317708 Run time without initialization = 3.160936821 Average number of zones advanced per microsecond: 0.829 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.384 ... 3.384 ... 3.384 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1347 2.1898 2.2408 66.21% Gravity::make_radial_gravity() 21 0.3339 0.3482 0.3673 10.85% Castro::initData() 1 0.0381 0.08727 0.1582 4.67% Castro::estTimeStep() 21 0.02866 0.09872 0.1525 4.50% Castro::do_advance_ctu() 10 0.03367 0.08448 0.1373 4.06% FabArray::setVal() 143 0.06643 0.07175 0.07733 2.28% FabArray::ParallelCopy_finish() 41 0.0308 0.03944 0.06648 1.96% Castro::reset_internal_energy() 63 0.0472 0.04951 0.05152 1.52% Castro::normalize_species() 62 0.04108 0.04212 0.04358 1.29% FabArray::ParallelCopy_nowait() 41 0.03389 0.04093 0.04312 1.27% StateData::FillBoundary(geom) 41 0.0381 0.04143 0.04269 1.26% FillPatchIterator::Initialize 41 0.02412 0.03149 0.0348 1.03% Gravity::interpolate_monopole_grav() 21 0.0272 0.02795 0.02867 0.85% Castro::construct_new_gravity_source() 10 0.02007 0.02355 0.02622 0.77% Amr::writePlotFile() 2 0.02227 0.02472 0.02552 0.75% Castro::expand_state() 10 0.01158 0.0185 0.02183 0.65% Castro::computeTemp() 63 0.01791 0.01871 0.02002 0.59% Castro::initialize_do_advance() 10 0.01108 0.01629 0.01787 0.53% MultiFab::Saxpy() 20 0.01303 0.01478 0.01635 0.48% VisMF::Write(FabArray) 2 0.01234 0.01283 0.01526 0.45% Castro::initialize_advance() 10 0.01074 0.01253 0.01471 0.43% Gravity::get_new_grav_vector() 11 0.009899 0.01111 0.01347 0.40% MultiFab::contains_nan() 20 0.009941 0.01094 0.01237 0.37% Castro::construct_old_gravity_source() 10 0.007262 0.01112 0.01216 0.36% FabArray::setDomainBndry() 41 0.006796 0.01025 0.01163 0.34% Amr::defBaseLevel() 1 0.006725 0.007839 0.0108 0.32% Gravity::get_old_grav_vector() 10 0.006936 0.008976 0.01062 0.31% Castro::enforce_min_density() 62 0.00646 0.006729 0.006947 0.21% Castro::construct_new_source() 50 0.005753 0.006403 0.006632 0.20% StateData::define() 4 0.004394 0.004985 0.006489 0.19% main() 1 0.003317 0.003735 0.003993 0.12% Castro::swap_state_time_levels() 10 0.002835 0.003604 0.003846 0.11% Amr::coarseTimeStep() 10 0.0003761 0.0005816 0.001107 0.03% Castro::finalize_do_advance() 10 0.0004628 0.0007967 0.0009146 0.03% Amr::InitAmr() 1 0.0002807 0.0003395 0.0004619 0.01% Amr::timeStep() 10 0.0001639 0.0002216 0.0004428 0.01% DistributionMapping::LeastUsedCPUs() 1 7.973e-06 0.0001512 0.0002133 0.01% Castro::clean_state() 62 0.0001327 0.0001431 0.0001506 0.00% StateDataPhysBCFunct::() 41 0.0001148 0.0001277 0.0001399 0.00% Castro::enforce_consistent_e() 1 7.674e-05 9.074e-05 0.0001382 0.00% Castro::construct_old_source() 50 5.488e-05 6.955e-05 8.387e-05 0.00% Castro::subcycle_advance_ctu() 10 4.106e-05 5.915e-05 7.588e-05 0.00% Amr::FinalizeInit() 1 3.613e-06 1.37e-05 7.538e-05 0.00% FabArray::ParallelCopy() 41 6.054e-05 6.758e-05 7.446e-05 0.00% FillPatchSingleLevel 41 5.58e-05 6.214e-05 7.023e-05 0.00% Castro::do_old_sources() 10 4.441e-05 5.57e-05 6.989e-05 0.00% FabArrayBase::getCPC() 41 4.275e-05 5.058e-05 6.875e-05 0.00% Castro::do_new_sources() 10 4.475e-05 5.565e-05 6.697e-05 0.00% Amr::writeSmallPlotFile() 1 2.586e-05 5.398e-05 6.581e-05 0.00% Castro::construct_old_gravity() 10 4.384e-05 5.247e-05 6.253e-05 0.00% Castro::finalize_advance() 10 4.923e-05 5.295e-05 5.568e-05 0.00% Castro::apply_source_to_state() 20 3.054e-05 4.483e-05 5.557e-05 0.00% Castro::advance() 10 3.317e-05 4.108e-05 5.304e-05 0.00% Castro::construct_new_gravity() 10 3.895e-05 4.328e-05 5.178e-05 0.00% Castro::enforce_speed_limit() 62 2.69e-05 3.102e-05 3.43e-05 0.00% FabArrayBase::CPC::define() 2 2.373e-05 2.573e-05 2.929e-05 0.00% Castro::check_for_nan() 20 1.884e-05 2.2e-05 2.505e-05 0.00% Castro::computeNewDt() 9 6.522e-06 9.813e-06 2.321e-05 0.00% Castro::create_source_corrector() 10 1.388e-05 1.743e-05 2.068e-05 0.00% Castro::post_init() 1 8.659e-06 1.355e-05 1.816e-05 0.00% Amr::init() 1 1.865e-06 3.758e-06 1.53e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.35e-06 9.789e-06 1.52e-05 0.00% Amr::initSubcycle() 1 8.45e-06 1.04e-05 1.484e-05 0.00% Gravity::swapTimeLevels() 10 1.036e-05 1.262e-05 1.403e-05 0.00% Castro::post_timestep() 10 9.07e-06 1.055e-05 1.185e-05 0.00% Gravity::set_mass_offset() 10 6.963e-06 7.816e-06 8.748e-06 0.00% Castro::FluxRegFineAdd() 10 5.649e-06 6.529e-06 7.777e-06 0.00% Castro::retry_advance_ctu() 10 4.919e-06 6.121e-06 7.486e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.971e-06 5.2e-06 6.242e-06 0.00% Amr::InitializeInit() 1 2.152e-06 3.045e-06 6.158e-06 0.00% Castro::post_regrid() 1 2.037e-06 3.271e-06 5.727e-06 0.00% Castro::computeInitialDt() 2 3.193e-06 3.895e-06 5.315e-06 0.00% Amr::initialInit() 1 1.361e-06 1.662e-06 1.913e-06 0.00% DistributionMapping::Distribute() 1 1.016e-06 1.335e-06 1.495e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.384 3.384 3.384 100.00% Amr::coarseTimeStep() 10 3.134 3.134 3.134 92.59% Amr::timeStep() 10 3.124 3.125 3.125 92.34% Castro::advance() 10 3.108 3.109 3.109 91.86% Castro::subcycle_advance_ctu() 10 3.029 3.032 3.035 89.67% Castro::do_advance_ctu() 10 3.029 3.032 3.035 89.67% Castro::construct_ctu_hydro_source() 10 2.135 2.19 2.241 66.21% Gravity::make_radial_gravity() 21 0.3339 0.3482 0.3673 10.85% Gravity::get_new_grav_vector() 11 0.2251 0.2262 0.2277 6.73% Castro::construct_old_gravity() 10 0.1973 0.2077 0.2247 6.64% Gravity::get_old_grav_vector() 10 0.1965 0.207 0.224 6.62% Amr::init() 1 0.2228 0.2229 0.223 6.59% Amr::initialInit() 1 0.2084 0.2088 0.209 6.18% Castro::construct_new_gravity() 10 0.2018 0.2024 0.2032 6.00% Amr::InitializeInit() 1 0.05599 0.1066 0.1814 5.36% Amr::defBaseLevel() 1 0.05598 0.1066 0.1814 5.36% FillPatchIterator::Initialize 41 0.1549 0.1639 0.1703 5.03% Castro::initData() 1 0.04191 0.09133 0.1624 4.80% Castro::initialize_do_advance() 10 0.1406 0.1537 0.1596 4.71% Amr::FinalizeInit() 1 0.0274 0.1022 0.153 4.52% Castro::estTimeStep() 21 0.02866 0.09872 0.1525 4.50% FillPatchSingleLevel 41 0.1155 0.1221 0.1394 4.12% Castro::computeInitialDt() 2 0.001804 0.07676 0.1274 3.77% Castro::clean_state() 62 0.1124 0.1162 0.1202 3.55% Castro::expand_state() 10 0.09624 0.1065 0.1116 3.30% FabArray::ParallelCopy() 41 0.07274 0.08052 0.1005 2.97% Castro::initialize_advance() 10 0.07413 0.07625 0.08008 2.37% FabArray::setVal() 143 0.06643 0.07175 0.07733 2.28% Castro::computeTemp() 63 0.06538 0.06822 0.07138 2.11% Castro::do_new_sources() 10 0.05753 0.06256 0.06791 2.01% FabArray::ParallelCopy_finish() 41 0.0308 0.03944 0.06648 1.96% Castro::reset_internal_energy() 63 0.0472 0.04951 0.05152 1.52% Castro::do_old_sources() 10 0.04087 0.04693 0.0485 1.43% Castro::normalize_species() 62 0.04108 0.04212 0.04358 1.29% FabArray::ParallelCopy_nowait() 41 0.03398 0.041 0.04319 1.28% StateDataPhysBCFunct::() 41 0.03822 0.04156 0.04283 1.27% StateData::FillBoundary(geom) 41 0.0381 0.04143 0.04269 1.26% Amr::writePlotFile() 2 0.03736 0.03755 0.03796 1.12% Castro::construct_new_source() 50 0.02582 0.02995 0.03285 0.97% Gravity::interpolate_monopole_grav() 21 0.0272 0.02795 0.02867 0.85% Castro::construct_new_gravity_source() 10 0.02007 0.02355 0.02622 0.77% Castro::post_init() 1 0.02437 0.02476 0.02501 0.74% Castro::apply_source_to_state() 20 0.01308 0.01482 0.0164 0.48% MultiFab::Saxpy() 20 0.01303 0.01478 0.01635 0.48% Castro::post_timestep() 10 0.0151 0.01559 0.01609 0.48% VisMF::Write(FabArray) 2 0.01234 0.01283 0.01526 0.45% Castro::check_for_nan() 20 0.009963 0.01097 0.01239 0.37% MultiFab::contains_nan() 20 0.009941 0.01094 0.01237 0.37% Castro::construct_old_source() 50 0.007317 0.01119 0.01224 0.36% Castro::construct_old_gravity_source() 10 0.007262 0.01112 0.01216 0.36% FabArray::setDomainBndry() 41 0.006796 0.01025 0.01163 0.34% Castro::computeNewDt() 9 0.006747 0.007454 0.00798 0.24% Castro::enforce_min_density() 62 0.00646 0.006729 0.006947 0.21% AmrLevel::AmrLevel(dm) 1 0.004403 0.004995 0.006504 0.19% StateData::define() 4 0.004394 0.004985 0.006489 0.19% Castro::swap_state_time_levels() 10 0.002835 0.003604 0.003846 0.11% Castro::post_regrid() 1 0.001529 0.001615 0.001885 0.06% Castro::finalize_do_advance() 10 0.0004628 0.0007967 0.0009146 0.03% Amr::InitAmr() 1 0.0002898 0.0003499 0.0004767 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.344e-05 0.0001577 0.0002207 0.01% DistributionMapping::LeastUsedCPUs() 1 7.973e-06 0.0001512 0.0002133 0.01% Castro::enforce_consistent_e() 1 7.674e-05 9.074e-05 0.0001382 0.00% FabArrayBase::getCPC() 41 6.648e-05 7.63e-05 9.636e-05 0.00% Amr::writeSmallPlotFile() 1 2.586e-05 5.398e-05 6.581e-05 0.00% Castro::finalize_advance() 10 5.487e-05 5.948e-05 6.219e-05 0.00% Castro::enforce_speed_limit() 62 2.69e-05 3.102e-05 3.43e-05 0.00% FabArrayBase::CPC::define() 2 2.373e-05 2.573e-05 2.929e-05 0.00% Castro::create_source_corrector() 10 1.388e-05 1.743e-05 2.068e-05 0.00% Amr::initSubcycle() 1 8.45e-06 1.04e-05 1.484e-05 0.00% Gravity::swapTimeLevels() 10 1.036e-05 1.262e-05 1.403e-05 0.00% Gravity::set_mass_offset() 10 6.963e-06 7.816e-06 8.748e-06 0.00% Castro::FluxRegFineAdd() 10 5.649e-06 6.529e-06 7.777e-06 0.00% Castro::retry_advance_ctu() 10 4.919e-06 6.121e-06 7.486e-06 0.00% DistributionMapping::Distribute() 1 1.016e-06 1.335e-06 1.495e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-31-gc768c36d6e08) finalized