MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-37-g3cc4a66759c9) initialized Starting run at 12:55:10 UTC on 2022-04-28. Successfully read inputs file ... Castro git describe: 22.04-38-ga2839038b AMReX git describe: 22.04-37-g3cc4a6675 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013548977 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.335177569 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.337162414 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.340171855 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.313413619 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316949109 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.344187828 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.300561962 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.295249602 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.297497437 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.295204024 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.044618389 seconds Ending run at 12:55:14 UTC on 2022-04-28. Run time = 3.418881872 Run time without initialization = 3.224074048 Average number of zones advanced per microsecond: 0.813 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.418 ... 3.419 ... 3.419 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1411 2.1969 2.2643 66.23% Gravity::make_radial_gravity() 21 0.3275 0.3429 0.3611 10.56% Castro::do_advance_ctu() 10 0.0567 0.1244 0.1789 5.23% Castro::initData() 1 0.03814 0.08484 0.1344 3.93% Castro::estTimeStep() 21 0.02524 0.07225 0.1238 3.62% FabArray::setVal() 143 0.06649 0.07144 0.07639 2.23% FabArray::ParallelCopy_finish() 41 0.03387 0.04213 0.06967 2.04% Castro::reset_internal_energy() 63 0.04654 0.04888 0.0508 1.49% Amr::writePlotFile() 2 0.04385 0.04602 0.04657 1.36% StateData::FillBoundary(geom) 41 0.03953 0.04182 0.04567 1.34% FabArray::ParallelCopy_nowait() 41 0.03374 0.04075 0.04327 1.27% Castro::normalize_species() 62 0.04113 0.04199 0.04276 1.25% FillPatchIterator::Initialize 41 0.02359 0.03089 0.03357 0.98% Gravity::interpolate_monopole_grav() 21 0.02782 0.02806 0.02832 0.83% Castro::construct_new_gravity_source() 10 0.02051 0.0235 0.02599 0.76% Castro::expand_state() 10 0.0114 0.01812 0.02094 0.61% Castro::computeTemp() 63 0.01726 0.01839 0.01956 0.57% Castro::initialize_do_advance() 10 0.01058 0.01618 0.01817 0.53% MultiFab::Saxpy() 20 0.01289 0.0146 0.01541 0.45% Castro::initialize_advance() 10 0.01072 0.01245 0.01463 0.43% VisMF::Write(FabArray) 2 0.01185 0.01235 0.01455 0.43% Gravity::get_new_grav_vector() 11 0.009838 0.01097 0.01291 0.38% MultiFab::contains_nan() 20 0.01042 0.01155 0.01272 0.37% FabArray::setDomainBndry() 41 0.006913 0.0103 0.01162 0.34% Castro::construct_old_gravity_source() 10 0.007014 0.01082 0.01159 0.34% Amr::defBaseLevel() 1 0.006505 0.007697 0.01015 0.30% Gravity::get_old_grav_vector() 10 0.006759 0.00889 0.00988 0.29% Castro::enforce_min_density() 62 0.006438 0.006823 0.007254 0.21% Castro::construct_new_source() 50 0.005846 0.006391 0.006727 0.20% StateData::define() 4 0.004303 0.004958 0.006373 0.19% main() 1 0.003636 0.004104 0.004428 0.13% Castro::swap_state_time_levels() 10 0.002805 0.003591 0.003801 0.11% Amr::coarseTimeStep() 10 0.000308 0.0006189 0.001191 0.03% Castro::finalize_do_advance() 10 0.0005178 0.0009092 0.001038 0.03% Amr::timeStep() 10 0.0001628 0.0002202 0.0004543 0.01% Amr::InitAmr() 1 0.0002789 0.0003377 0.0004406 0.01% DistributionMapping::LeastUsedCPUs() 1 7.384e-06 0.0001484 0.0002232 0.01% StateDataPhysBCFunct::() 41 0.0001274 0.0001671 0.0001876 0.01% Castro::clean_state() 62 0.000133 0.0001532 0.000173 0.01% Amr::FinalizeInit() 1 3.964e-06 1.687e-05 0.0001033 0.00% Castro::construct_old_source() 50 5.933e-05 8.189e-05 0.0001013 0.00% Castro::enforce_consistent_e() 1 7.694e-05 8.583e-05 9.283e-05 0.00% FillPatchSingleLevel 41 6.717e-05 7.666e-05 8.648e-05 0.00% FabArray::ParallelCopy() 41 6.856e-05 7.403e-05 8.504e-05 0.00% Castro::subcycle_advance_ctu() 10 5.104e-05 6.471e-05 7.7e-05 0.00% Amr::writeSmallPlotFile() 1 2.535e-05 6.005e-05 6.989e-05 0.00% FabArrayBase::getCPC() 41 4.339e-05 5.449e-05 6.828e-05 0.00% Castro::do_old_sources() 10 5.284e-05 6.065e-05 6.638e-05 0.00% Castro::do_new_sources() 10 5.523e-05 6.066e-05 6.448e-05 0.00% Castro::construct_old_gravity() 10 5.428e-05 6.066e-05 6.415e-05 0.00% Castro::finalize_advance() 10 5.435e-05 5.788e-05 6.011e-05 0.00% Castro::apply_source_to_state() 20 3.986e-05 4.849e-05 5.875e-05 0.00% Castro::construct_new_gravity() 10 3.976e-05 4.914e-05 5.852e-05 0.00% Castro::advance() 10 3.635e-05 4.115e-05 4.913e-05 0.00% FabArrayBase::CPC::define() 2 2.131e-05 2.863e-05 4.315e-05 0.00% Castro::enforce_speed_limit() 62 2.854e-05 3.459e-05 4.269e-05 0.00% Castro::check_for_nan() 20 2.215e-05 2.503e-05 2.785e-05 0.00% Castro::create_source_corrector() 10 1.478e-05 1.818e-05 2.396e-05 0.00% Castro::post_init() 1 9.016e-06 1.141e-05 1.985e-05 0.00% Gravity::swapTimeLevels() 10 1.194e-05 1.389e-05 1.663e-05 0.00% Amr::initSubcycle() 1 8.263e-06 1.04e-05 1.513e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.164e-06 9.394e-06 1.456e-05 0.00% Castro::post_timestep() 10 7.757e-06 9.337e-06 1.034e-05 0.00% Gravity::set_mass_offset() 10 7.069e-06 7.826e-06 8.988e-06 0.00% Castro::computeNewDt() 9 7.599e-06 8.014e-06 8.392e-06 0.00% Castro::FluxRegFineAdd() 10 5.882e-06 6.756e-06 7.642e-06 0.00% Castro::retry_advance_ctu() 10 4.985e-06 6.027e-06 7.278e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.022e-06 4.671e-06 5.442e-06 0.00% Amr::InitializeInit() 1 2.129e-06 2.764e-06 5.213e-06 0.00% Castro::post_regrid() 1 1.901e-06 3.037e-06 4.601e-06 0.00% Castro::computeInitialDt() 2 3.123e-06 3.609e-06 4.194e-06 0.00% Amr::init() 1 2.033e-06 2.645e-06 3.525e-06 0.00% Amr::initialInit() 1 1.211e-06 1.595e-06 2.243e-06 0.00% DistributionMapping::Distribute() 1 1.084e-06 1.289e-06 1.502e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.418 3.419 3.419 100.00% Amr::coarseTimeStep() 10 3.175 3.175 3.175 92.87% Amr::timeStep() 10 3.166 3.166 3.167 92.62% Castro::advance() 10 3.15 3.15 3.15 92.15% Castro::subcycle_advance_ctu() 10 3.072 3.075 3.078 90.03% Castro::do_advance_ctu() 10 3.072 3.075 3.078 90.03% Castro::construct_ctu_hydro_source() 10 2.141 2.197 2.264 66.23% Gravity::make_radial_gravity() 21 0.3275 0.3429 0.3611 10.56% Gravity::get_new_grav_vector() 11 0.2214 0.2226 0.2237 6.54% Castro::construct_old_gravity() 10 0.1937 0.2056 0.2212 6.47% Gravity::get_old_grav_vector() 10 0.1929 0.2048 0.2206 6.45% Castro::construct_new_gravity() 10 0.1982 0.1986 0.1992 5.83% Amr::init() 1 0.1942 0.1943 0.1944 5.69% Amr::initialInit() 1 0.1804 0.1807 0.1808 5.29% FillPatchIterator::Initialize 41 0.1592 0.1663 0.1751 5.12% Castro::initialize_do_advance() 10 0.1446 0.1553 0.1611 4.71% Amr::InitializeInit() 1 0.05514 0.1035 0.1531 4.48% Amr::defBaseLevel() 1 0.05514 0.1035 0.1531 4.48% FillPatchSingleLevel 41 0.1185 0.1251 0.1446 4.23% Castro::initData() 1 0.04205 0.08864 0.1384 4.05% Amr::FinalizeInit() 1 0.02767 0.07714 0.1255 3.67% Castro::estTimeStep() 21 0.02524 0.07225 0.1238 3.62% Castro::clean_state() 62 0.112 0.1153 0.1184 3.46% Castro::expand_state() 10 0.1023 0.1087 0.1127 3.30% FabArray::ParallelCopy() 41 0.07728 0.08304 0.1036 3.03% Castro::computeInitialDt() 2 0.001794 0.05135 0.0998 2.92% Castro::initialize_advance() 10 0.07212 0.07535 0.07836 2.29% FabArray::setVal() 143 0.06649 0.07144 0.07639 2.23% Castro::computeTemp() 63 0.0638 0.06727 0.0702 2.05% FabArray::ParallelCopy_finish() 41 0.03387 0.04213 0.06967 2.04% Castro::do_new_sources() 10 0.05811 0.06262 0.06776 1.98% Amr::writePlotFile() 2 0.05827 0.05837 0.05848 1.71% Castro::reset_internal_energy() 63 0.04654 0.04888 0.0508 1.49% Castro::do_old_sources() 10 0.04059 0.04653 0.04815 1.41% StateDataPhysBCFunct::() 41 0.03971 0.04199 0.04584 1.34% StateData::FillBoundary(geom) 41 0.03953 0.04182 0.04567 1.34% FabArray::ParallelCopy_nowait() 41 0.03384 0.04083 0.04334 1.27% Castro::normalize_species() 62 0.04113 0.04199 0.04276 1.25% Castro::construct_new_source() 50 0.02636 0.0299 0.03271 0.96% Gravity::interpolate_monopole_grav() 21 0.02782 0.02806 0.02832 0.83% Castro::construct_new_gravity_source() 10 0.02051 0.0235 0.02599 0.76% Castro::post_init() 1 0.02497 0.02511 0.02529 0.74% Castro::post_timestep() 10 0.01538 0.01576 0.01622 0.47% Castro::apply_source_to_state() 20 0.01295 0.01465 0.01546 0.45% MultiFab::Saxpy() 20 0.01289 0.0146 0.01541 0.45% VisMF::Write(FabArray) 2 0.01185 0.01235 0.01455 0.43% Castro::check_for_nan() 20 0.01045 0.01158 0.01275 0.37% MultiFab::contains_nan() 20 0.01042 0.01155 0.01272 0.37% Castro::construct_old_source() 50 0.007073 0.0109 0.01168 0.34% FabArray::setDomainBndry() 41 0.006913 0.0103 0.01162 0.34% Castro::construct_old_gravity_source() 10 0.007014 0.01082 0.01159 0.34% Castro::computeNewDt() 9 0.006703 0.007222 0.00791 0.23% Castro::enforce_min_density() 62 0.006438 0.006823 0.007254 0.21% AmrLevel::AmrLevel(dm) 1 0.00431 0.004967 0.006387 0.19% StateData::define() 4 0.004303 0.004958 0.006373 0.19% Castro::swap_state_time_levels() 10 0.002805 0.003591 0.003801 0.11% Castro::post_regrid() 1 0.001524 0.001619 0.001864 0.05% Castro::finalize_do_advance() 10 0.0005178 0.0009092 0.001038 0.03% Amr::InitAmr() 1 0.0002873 0.0003481 0.0004557 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.392e-05 0.0001544 0.0002296 0.01% DistributionMapping::LeastUsedCPUs() 1 7.384e-06 0.0001484 0.0002232 0.01% FabArrayBase::getCPC() 41 7.183e-05 8.312e-05 0.0001031 0.00% Castro::enforce_consistent_e() 1 7.694e-05 8.583e-05 9.283e-05 0.00% Amr::writeSmallPlotFile() 1 2.535e-05 6.005e-05 6.989e-05 0.00% Castro::finalize_advance() 10 6.024e-05 6.464e-05 6.718e-05 0.00% FabArrayBase::CPC::define() 2 2.131e-05 2.863e-05 4.315e-05 0.00% Castro::enforce_speed_limit() 62 2.854e-05 3.459e-05 4.269e-05 0.00% Castro::create_source_corrector() 10 1.478e-05 1.818e-05 2.396e-05 0.00% Gravity::swapTimeLevels() 10 1.194e-05 1.389e-05 1.663e-05 0.00% Amr::initSubcycle() 1 8.263e-06 1.04e-05 1.513e-05 0.00% Gravity::set_mass_offset() 10 7.069e-06 7.826e-06 8.988e-06 0.00% Castro::FluxRegFineAdd() 10 5.882e-06 6.756e-06 7.642e-06 0.00% Castro::retry_advance_ctu() 10 4.985e-06 6.027e-06 7.278e-06 0.00% DistributionMapping::Distribute() 1 1.084e-06 1.289e-06 1.502e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-37-g3cc4a66759c9) finalized