MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-37-g3cc4a66759c9) initialized Starting run at 15:13:33 UTC on 2022-04-28. Successfully read inputs file ... Castro git describe: 22.04-39-g5c7dc8239 AMReX git describe: 22.04-37-g3cc4a6675 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.02987424 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.349263496 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339071358 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.318346017 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.317815139 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.316462855 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337330156 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.302722294 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.300429429 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.300592159 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.300716227 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00974811 seconds Ending run at 15:13:37 UTC on 2022-04-28. Run time = 3.450826179 Run time without initialization = 3.196119466 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.45 ... 3.451 ... 3.451 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2145 2.2498 2.2744 65.91% Gravity::make_radial_gravity() 21 0.3461 0.3561 0.3744 10.85% Castro::initData() 1 0.03935 0.09029 0.1593 4.62% Castro::estTimeStep() 21 0.01971 0.09759 0.151 4.38% Castro::do_advance_ctu() 10 0.05482 0.08142 0.1158 3.36% FabArray::ParallelCopy_finish() 41 0.03845 0.05237 0.09186 2.66% FabArray::setVal() 143 0.05302 0.0666 0.07362 2.13% Castro::reset_internal_energy() 63 0.04807 0.04971 0.05299 1.54% StateData::FillBoundary(geom) 41 0.038 0.04062 0.04393 1.27% Castro::normalize_species() 62 0.04148 0.04216 0.04338 1.26% FabArray::ParallelCopy_nowait() 41 0.03358 0.03859 0.04128 1.20% FillPatchIterator::Initialize 41 0.02357 0.02911 0.03275 0.95% Gravity::interpolate_monopole_grav() 21 0.02768 0.02802 0.02862 0.83% Amr::writePlotFile() 2 0.02324 0.02674 0.02823 0.82% Castro::construct_new_gravity_source() 10 0.02059 0.02301 0.02494 0.72% Castro::expand_state() 10 0.01162 0.01864 0.02401 0.70% Castro::computeTemp() 63 0.01764 0.0188 0.02003 0.58% Castro::initialize_do_advance() 10 0.01069 0.01576 0.01814 0.53% VisMF::Write(FabArray) 2 0.01209 0.01307 0.01662 0.48% MultiFab::Saxpy() 20 0.01191 0.01398 0.01507 0.44% MultiFab::contains_nan() 20 0.009729 0.01133 0.01423 0.41% FabArray::setDomainBndry() 41 0.007479 0.009803 0.01382 0.40% Castro::initialize_advance() 10 0.003842 0.01034 0.013 0.38% Gravity::get_new_grav_vector() 11 0.009801 0.01074 0.01247 0.36% Castro::construct_old_gravity_source() 10 0.007229 0.01011 0.01098 0.32% Gravity::get_old_grav_vector() 10 0.006797 0.008807 0.0106 0.31% Amr::defBaseLevel() 1 0.00682 0.008011 0.01052 0.30% Castro::construct_new_source() 50 0.005743 0.00635 0.006736 0.20% StateData::define() 4 0.004463 0.005141 0.006587 0.19% Castro::enforce_min_density() 62 0.005628 0.006114 0.00647 0.19% Castro::swap_state_time_levels() 10 0.002787 0.003924 0.005459 0.16% main() 1 0.003463 0.003722 0.00392 0.11% Amr::coarseTimeStep() 10 0.0004207 0.0008449 0.001984 0.06% Castro::finalize_do_advance() 10 0.0004647 0.001012 0.001236 0.04% Amr::timeStep() 10 0.0001661 0.0002385 0.0005522 0.02% Amr::InitAmr() 1 0.0002725 0.0003337 0.0004518 0.01% Castro::construct_old_source() 50 4.141e-05 9.254e-05 0.0002979 0.01% DistributionMapping::LeastUsedCPUs() 1 7.534e-06 0.0001506 0.0002202 0.01% StateDataPhysBCFunct::() 41 0.000107 0.0001352 0.0001795 0.01% Castro::clean_state() 62 0.0001286 0.0001368 0.0001461 0.00% Castro::enforce_consistent_e() 1 7.994e-05 9.96e-05 0.0001418 0.00% FillPatchSingleLevel 41 6.005e-05 7.139e-05 8.99e-05 0.00% FabArray::ParallelCopy() 41 5.76e-05 7.15e-05 8.353e-05 0.00% Amr::FinalizeInit() 1 4.725e-06 1.426e-05 7.539e-05 0.00% Amr::writeSmallPlotFile() 1 3.635e-05 5.575e-05 7.052e-05 0.00% Castro::subcycle_advance_ctu() 10 3.935e-05 4.962e-05 6.817e-05 0.00% Castro::do_new_sources() 10 4.799e-05 5.551e-05 6.587e-05 0.00% Castro::do_old_sources() 10 4.233e-05 5.339e-05 6.501e-05 0.00% Castro::construct_old_gravity() 10 4.037e-05 4.975e-05 5.939e-05 0.00% Castro::finalize_advance() 10 4.94e-05 5.406e-05 5.849e-05 0.00% FabArrayBase::getCPC() 41 3.855e-05 4.469e-05 5.82e-05 0.00% Castro::apply_source_to_state() 20 3.509e-05 4.274e-05 5.422e-05 0.00% Castro::construct_new_gravity() 10 3.831e-05 4.259e-05 4.886e-05 0.00% Castro::advance() 10 3.073e-05 3.688e-05 4.157e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.848e-05 3.8e-05 0.00% Castro::enforce_speed_limit() 62 2.649e-05 3.147e-05 3.631e-05 0.00% Castro::check_for_nan() 20 2.201e-05 2.416e-05 2.614e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.333e-05 1.987e-05 2.509e-05 0.00% Gravity::swapTimeLevels() 10 1.102e-05 1.429e-05 1.974e-05 0.00% Castro::create_source_corrector() 10 1.409e-05 1.568e-05 1.91e-05 0.00% Amr::initSubcycle() 1 8.436e-06 1.052e-05 1.519e-05 0.00% Castro::post_init() 1 8.332e-06 1.085e-05 1.451e-05 0.00% Castro::post_timestep() 10 7.789e-06 9.87e-06 1.185e-05 0.00% Gravity::set_mass_offset() 10 7.192e-06 7.905e-06 9.166e-06 0.00% Castro::post_regrid() 1 3.45e-06 4.651e-06 8.438e-06 0.00% Castro::computeNewDt() 9 6.139e-06 7.151e-06 7.872e-06 0.00% Castro::retry_advance_ctu() 10 4.253e-06 5.789e-06 6.838e-06 0.00% Castro::FluxRegFineAdd() 10 4.705e-06 5.859e-06 6.743e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.253e-06 5.227e-06 6.348e-06 0.00% Amr::InitializeInit() 1 2.095e-06 2.975e-06 6.104e-06 0.00% Castro::computeInitialDt() 2 3.48e-06 4.602e-06 5.427e-06 0.00% Amr::initialInit() 1 1.157e-06 1.714e-06 2.651e-06 0.00% Amr::init() 1 1.954e-06 2.292e-06 2.606e-06 0.00% DistributionMapping::Distribute() 1 1.044e-06 1.353e-06 1.647e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.45 3.451 3.451 100.00% Amr::coarseTimeStep() 10 3.182 3.182 3.182 92.22% Amr::timeStep() 10 3.171 3.172 3.173 91.95% Castro::advance() 10 3.156 3.156 3.157 91.47% Castro::subcycle_advance_ctu() 10 3.081 3.087 3.105 89.97% Castro::do_advance_ctu() 10 3.081 3.087 3.105 89.97% Castro::construct_ctu_hydro_source() 10 2.215 2.25 2.274 65.91% Gravity::make_radial_gravity() 21 0.3461 0.3561 0.3744 10.85% Amr::init() 1 0.2541 0.2542 0.2543 7.37% Gravity::get_new_grav_vector() 11 0.2311 0.2334 0.235 6.81% Amr::initialInit() 1 0.2236 0.2243 0.2249 6.52% Castro::construct_old_gravity() 10 0.1992 0.2076 0.2234 6.47% Gravity::get_old_grav_vector() 10 0.1982 0.2067 0.2228 6.46% Castro::construct_new_gravity() 10 0.1951 0.1965 0.1979 5.74% FillPatchIterator::Initialize 41 0.1571 0.1708 0.1961 5.68% Amr::InitializeInit() 1 0.05791 0.1099 0.1834 5.31% Amr::defBaseLevel() 1 0.0579 0.1099 0.1834 5.31% Amr::FinalizeInit() 1 0.04143 0.1143 0.1663 4.82% Castro::initialize_do_advance() 10 0.1576 0.1616 0.1662 4.82% Castro::initData() 1 0.04289 0.09462 0.1645 4.77% FillPatchSingleLevel 41 0.124 0.1319 0.1639 4.75% Castro::estTimeStep() 21 0.01971 0.09759 0.151 4.38% Castro::computeInitialDt() 2 0.002399 0.07599 0.128 3.71% Castro::expand_state() 10 0.1106 0.1158 0.1267 3.67% FabArray::ParallelCopy() 41 0.07986 0.09111 0.1256 3.64% Castro::clean_state() 62 0.1124 0.1158 0.1209 3.50% FabArray::ParallelCopy_finish() 41 0.03845 0.05237 0.09186 2.66% Castro::initialize_advance() 10 0.05102 0.06953 0.07538 2.18% FabArray::setVal() 143 0.05302 0.0666 0.07362 2.13% Castro::computeTemp() 63 0.06571 0.06851 0.07302 2.12% Castro::do_new_sources() 10 0.05768 0.06165 0.06628 1.92% Castro::reset_internal_energy() 63 0.04807 0.04971 0.05299 1.54% Castro::do_old_sources() 10 0.0387 0.04563 0.04882 1.41% StateDataPhysBCFunct::() 41 0.03818 0.04076 0.04403 1.28% StateData::FillBoundary(geom) 41 0.038 0.04062 0.04393 1.27% Castro::normalize_species() 62 0.04148 0.04216 0.04338 1.26% FabArray::ParallelCopy_nowait() 41 0.03367 0.03866 0.04135 1.20% Amr::writePlotFile() 2 0.03902 0.03981 0.04058 1.18% Castro::post_init() 1 0.03689 0.03769 0.03821 1.11% Castro::construct_new_source() 50 0.02633 0.02936 0.03165 0.92% Gravity::interpolate_monopole_grav() 21 0.02768 0.02802 0.02862 0.83% Castro::construct_new_gravity_source() 10 0.02059 0.02301 0.02494 0.72% VisMF::Write(FabArray) 2 0.01209 0.01307 0.01662 0.48% Castro::post_timestep() 10 0.01493 0.01568 0.01616 0.47% Castro::apply_source_to_state() 20 0.01195 0.01402 0.01512 0.44% MultiFab::Saxpy() 20 0.01191 0.01398 0.01507 0.44% Castro::check_for_nan() 20 0.009751 0.01135 0.01425 0.41% MultiFab::contains_nan() 20 0.009729 0.01133 0.01423 0.41% FabArray::setDomainBndry() 41 0.007479 0.009803 0.01382 0.40% Castro::construct_old_source() 50 0.00727 0.0102 0.01106 0.32% Castro::construct_old_gravity_source() 10 0.007229 0.01011 0.01098 0.32% Castro::computeNewDt() 9 0.006957 0.007923 0.009154 0.27% AmrLevel::AmrLevel(dm) 1 0.004479 0.005161 0.006608 0.19% StateData::define() 4 0.004463 0.005141 0.006587 0.19% Castro::enforce_min_density() 62 0.005628 0.006114 0.00647 0.19% Castro::swap_state_time_levels() 10 0.002787 0.003924 0.005459 0.16% Castro::post_regrid() 1 0.001581 0.001935 0.0027 0.08% Castro::finalize_do_advance() 10 0.0004647 0.001012 0.001236 0.04% Amr::InitAmr() 1 0.0002811 0.0003442 0.0004665 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.393e-05 0.0001572 0.000228 0.01% DistributionMapping::LeastUsedCPUs() 1 7.534e-06 0.0001506 0.0002202 0.01% Castro::enforce_consistent_e() 1 7.994e-05 9.96e-05 0.0001418 0.00% FabArrayBase::getCPC() 41 6.179e-05 7.317e-05 8.738e-05 0.00% Amr::writeSmallPlotFile() 1 3.635e-05 5.575e-05 7.052e-05 0.00% Castro::finalize_advance() 10 5.521e-05 5.992e-05 6.376e-05 0.00% FabArrayBase::CPC::define() 2 2.161e-05 2.848e-05 3.8e-05 0.00% Castro::enforce_speed_limit() 62 2.649e-05 3.147e-05 3.631e-05 0.00% Gravity::swapTimeLevels() 10 1.102e-05 1.429e-05 1.974e-05 0.00% Castro::create_source_corrector() 10 1.409e-05 1.568e-05 1.91e-05 0.00% Amr::initSubcycle() 1 8.436e-06 1.052e-05 1.519e-05 0.00% Gravity::set_mass_offset() 10 7.192e-06 7.905e-06 9.166e-06 0.00% Castro::retry_advance_ctu() 10 4.253e-06 5.789e-06 6.838e-06 0.00% Castro::FluxRegFineAdd() 10 4.705e-06 5.859e-06 6.743e-06 0.00% DistributionMapping::Distribute() 1 1.044e-06 1.353e-06 1.647e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-37-g3cc4a66759c9) finalized