MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-37-g3cc4a66759c9) initialized Starting run at 18:02:04 UTC on 2022-04-28. Successfully read inputs file ... Castro git describe: 22.04-41-gfdb304c1e AMReX git describe: 22.04-37-g3cc4a6675 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013091957 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.32387431 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.306185248 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.30292943 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.305136733 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.305491335 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.322463438 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.303406998 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.28998722 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.292285595 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.290634359 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.032433731 seconds Ending run at 18:02:07 UTC on 2022-04-28. Run time = 3.277991045 Run time without initialization = 3.077695092 Average number of zones advanced per microsecond: 0.852 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.277 ... 3.278 ... 3.278 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1247 2.1487 2.1858 66.68% Gravity::make_radial_gravity() 21 0.3284 0.3379 0.3497 10.67% Castro::initData() 1 0.03902 0.09474 0.1355 4.13% Castro::estTimeStep() 21 0.02117 0.06918 0.1327 4.05% Castro::do_advance_ctu() 10 0.03175 0.06637 0.09014 2.75% FabArray::setVal() 143 0.06141 0.06607 0.07506 2.29% FabArray::ParallelCopy_finish() 41 0.03318 0.04223 0.06228 1.90% Castro::reset_internal_energy(Fab) 1008 0.04785 0.04969 0.05184 1.58% Castro::normalize_species() 62 0.04123 0.04216 0.04287 1.31% StateData::FillBoundary(geom) 41 0.03813 0.04017 0.04163 1.27% FabArray::ParallelCopy_nowait() 41 0.03358 0.03687 0.03876 1.18% VisMF::Write(FabArray) 2 0.03512 0.03559 0.0378 1.15% FillPatchIterator::Initialize 41 0.02347 0.02671 0.02955 0.90% Gravity::interpolate_monopole_grav() 21 0.0278 0.02798 0.02833 0.86% Castro::construct_new_gravity_source() 10 0.0204 0.02262 0.0268 0.82% Castro::computeTemp() 63 0.01748 0.01846 0.01945 0.59% Castro::expand_state() 10 0.01218 0.01562 0.0174 0.53% Castro::initialize_do_advance() 10 0.01083 0.01468 0.0164 0.50% MultiFab::Saxpy() 20 0.01246 0.01351 0.01436 0.44% MultiFab::contains_nan() 20 0.009869 0.0108 0.01197 0.37% Gravity::get_new_grav_vector() 11 0.009085 0.009964 0.0114 0.35% Castro::construct_old_gravity_source() 10 0.007548 0.01012 0.01136 0.35% Castro::initialize_advance() 10 0.004266 0.008247 0.01092 0.33% Amr::writePlotFile() 2 0.007935 0.01023 0.01084 0.33% FabArray::setDomainBndry() 41 0.006862 0.008315 0.009614 0.29% Castro::initMFs() 1 0.005356 0.007421 0.00869 0.27% Gravity::get_old_grav_vector() 10 0.006706 0.007792 0.008393 0.26% StateData::define() 4 0.004386 0.006207 0.007214 0.22% Castro::enforce_min_density() 62 0.006262 0.00655 0.006766 0.21% Castro::construct_new_source() 50 0.005774 0.006058 0.006433 0.20% Castro::finalize_advance() 10 0.00318 0.003609 0.004052 0.12% main() 1 0.003148 0.00371 0.004001 0.12% Castro::swap_state_time_levels() 10 0.002642 0.003311 0.003672 0.11% Castro::buildMetrics() 1 0.00128 0.001781 0.002065 0.06% Amr::coarseTimeStep() 10 0.0003474 0.0008368 0.001652 0.05% Castro::finalize_do_advance() 10 0.0005449 0.0008855 0.001071 0.03% Amr::timeStep() 10 0.000198 0.000267 0.0005596 0.02% Amr::InitAmr() 1 0.0002928 0.0004292 0.0005264 0.02% Castro::reset_internal_energy(MultiFab) 63 0.0002829 0.0003124 0.0003387 0.01% DistributionMapping::LeastUsedCPUs() 1 1.482e-05 0.0001435 0.0003147 0.01% Castro::clean_state() 62 0.0001412 0.0001726 0.0002053 0.01% StateDataPhysBCFunct::() 41 0.0001113 0.0001443 0.0001736 0.01% Castro::enforce_consistent_e() 1 7.843e-05 9.683e-05 0.0001349 0.00% Castro::construct_old_source() 50 5.447e-05 7.366e-05 9.224e-05 0.00% Castro::Castro() 1 5.199e-05 7.025e-05 8.97e-05 0.00% FillPatchSingleLevel 41 6.138e-05 7.01e-05 8.372e-05 0.00% FabArray::ParallelCopy() 41 5.987e-05 6.605e-05 7.386e-05 0.00% Castro::subcycle_advance_ctu() 10 4.236e-05 5.998e-05 7.372e-05 0.00% FabArrayBase::getCPC() 41 4.856e-05 5.989e-05 7.315e-05 0.00% Amr::writeSmallPlotFile() 1 2.639e-05 5.419e-05 7.09e-05 0.00% Castro::construct_old_gravity() 10 4.487e-05 5.478e-05 6.837e-05 0.00% Castro::apply_source_to_state() 20 4.338e-05 5.054e-05 6.709e-05 0.00% Castro::do_new_sources() 10 5.436e-05 5.863e-05 6.611e-05 0.00% Amr::FinalizeInit() 1 3.351e-06 1.158e-05 6.478e-05 0.00% Castro::do_old_sources() 10 5.085e-05 6.036e-05 6.427e-05 0.00% Castro::construct_new_gravity() 10 3.602e-05 4.692e-05 5.722e-05 0.00% Castro::advance() 10 3.855e-05 4.314e-05 4.923e-05 0.00% Castro::enforce_speed_limit() 62 2.608e-05 3.475e-05 4.682e-05 0.00% Amr::defBaseLevel() 1 2.388e-05 2.964e-05 3.504e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.15e-05 1.818e-05 3.268e-05 0.00% FabArrayBase::CPC::define() 2 2.174e-05 2.55e-05 3.228e-05 0.00% Castro::check_for_nan() 20 2.018e-05 2.366e-05 2.801e-05 0.00% Gravity::swapTimeLevels() 10 1.186e-05 1.463e-05 1.805e-05 0.00% Amr::initSubcycle() 1 8.53e-06 1.375e-05 1.762e-05 0.00% Castro::post_timestep() 10 1.334e-05 1.422e-05 1.574e-05 0.00% Castro::create_source_corrector() 10 9.661e-06 1.099e-05 1.292e-05 0.00% Castro::FluxRegCrseInit 10 7.443e-06 1.031e-05 1.18e-05 0.00% Castro::post_init() 1 7.996e-06 9.471e-06 1.165e-05 0.00% Gravity::set_mass_offset() 10 8.601e-06 9.791e-06 1.081e-05 0.00% Castro::computeNewDt() 9 7.082e-06 8.544e-06 9.362e-06 0.00% Amr::InitializeInit() 1 2.382e-06 4.094e-06 8.181e-06 0.00% Amr::initialInit() 1 1.111e-06 2.315e-06 7.112e-06 0.00% Castro::retry_advance_ctu() 10 4.945e-06 5.552e-06 6.063e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.468e-06 5.119e-06 5.739e-06 0.00% Castro::post_regrid() 1 1.846e-06 2.743e-06 4.668e-06 0.00% Castro::computeInitialDt() 2 2.93e-06 3.513e-06 4.504e-06 0.00% Castro::FluxRegFineAdd() 10 1.849e-06 2.339e-06 2.83e-06 0.00% Amr::init() 1 1.842e-06 2.264e-06 2.673e-06 0.00% DistributionMapping::Distribute() 1 1.196e-06 1.46e-06 1.742e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.277 3.278 3.278 100.00% Amr::coarseTimeStep() 10 3.041 3.041 3.041 92.78% Amr::timeStep() 10 3.031 3.032 3.032 92.51% Castro::advance() 10 3.015 3.016 3.016 92.01% Castro::subcycle_advance_ctu() 10 2.938 2.944 2.951 90.01% Castro::do_advance_ctu() 10 2.938 2.944 2.951 90.01% Castro::construct_ctu_hydro_source() 10 2.125 2.149 2.186 66.68% Gravity::make_radial_gravity() 21 0.3284 0.3379 0.3497 10.67% Gravity::get_new_grav_vector() 11 0.2171 0.2183 0.2201 6.72% Castro::construct_old_gravity() 10 0.1916 0.2002 0.2111 6.44% Gravity::get_old_grav_vector() 10 0.1908 0.1995 0.2105 6.42% Amr::init() 1 0.1996 0.1997 0.1999 6.10% Castro::construct_new_gravity() 10 0.1937 0.1949 0.1963 5.99% Amr::initialInit() 1 0.1862 0.1864 0.1866 5.69% FillPatchIterator::Initialize 41 0.145 0.1547 0.1656 5.05% Amr::InitializeInit() 1 0.05519 0.1167 0.1597 4.87% Amr::defBaseLevel() 1 0.05518 0.1167 0.1597 4.87% Castro::initialize_do_advance() 10 0.144 0.1471 0.1536 4.69% Castro::initData() 1 0.04259 0.09891 0.1393 4.25% FillPatchSingleLevel 41 0.1113 0.1196 0.1351 4.12% Castro::estTimeStep() 21 0.02117 0.06918 0.1327 4.05% Amr::FinalizeInit() 1 0.02651 0.0697 0.1314 4.01% Castro::clean_state() 62 0.1133 0.1163 0.12 3.66% Castro::expand_state() 10 0.0978 0.1026 0.1071 3.27% Castro::computeInitialDt() 2 0.001592 0.04472 0.1063 3.24% FabArray::ParallelCopy() 41 0.07128 0.07925 0.09603 2.93% FabArray::setVal() 143 0.06141 0.06607 0.07506 2.29% Castro::initialize_advance() 10 0.06092 0.06792 0.07453 2.27% Castro::computeTemp() 63 0.06617 0.06847 0.07161 2.18% Castro::do_new_sources() 10 0.05738 0.06045 0.06864 2.09% FabArray::ParallelCopy_finish() 41 0.03318 0.04223 0.06228 1.90% Castro::reset_internal_energy(MultiFab) 63 0.04816 0.05 0.05216 1.59% Castro::reset_internal_energy(Fab) 1008 0.04785 0.04969 0.05184 1.58% Castro::do_old_sources() 10 0.04032 0.04451 0.04718 1.44% Amr::writePlotFile() 2 0.04573 0.04582 0.04595 1.40% Castro::normalize_species() 62 0.04123 0.04216 0.04287 1.31% StateDataPhysBCFunct::() 41 0.0383 0.04031 0.0418 1.28% StateData::FillBoundary(geom) 41 0.03813 0.04017 0.04163 1.27% FabArray::ParallelCopy_nowait() 41 0.03367 0.03696 0.03886 1.19% VisMF::Write(FabArray) 2 0.03512 0.03559 0.0378 1.15% Castro::construct_new_source() 50 0.02618 0.02868 0.03309 1.01% Gravity::interpolate_monopole_grav() 21 0.0278 0.02798 0.02833 0.86% Castro::construct_new_gravity_source() 10 0.0204 0.02262 0.0268 0.82% Castro::post_init() 1 0.02381 0.02424 0.02437 0.74% Castro::post_timestep() 10 0.01532 0.01595 0.01636 0.50% Castro::apply_source_to_state() 20 0.0125 0.01356 0.0144 0.44% MultiFab::Saxpy() 20 0.01246 0.01351 0.01436 0.44% Castro::Castro() 1 0.007915 0.01137 0.0131 0.40% Castro::check_for_nan() 20 0.009897 0.01083 0.01199 0.37% MultiFab::contains_nan() 20 0.009869 0.0108 0.01197 0.37% Castro::construct_old_source() 50 0.007602 0.01019 0.01145 0.35% Castro::construct_old_gravity_source() 10 0.007548 0.01012 0.01136 0.35% FabArray::setDomainBndry() 41 0.006862 0.008315 0.009614 0.29% Castro::initMFs() 1 0.005356 0.007421 0.00869 0.27% Castro::computeNewDt() 9 0.006888 0.007712 0.008376 0.26% AmrLevel::AmrLevel(dm) 1 0.004398 0.006225 0.007232 0.22% StateData::define() 4 0.004386 0.006207 0.007214 0.22% Castro::enforce_min_density() 62 0.006262 0.00655 0.006766 0.21% Castro::finalize_advance() 10 0.003191 0.003622 0.004066 0.12% Castro::swap_state_time_levels() 10 0.002642 0.003311 0.003672 0.11% Castro::buildMetrics() 1 0.001394 0.001984 0.002305 0.07% Castro::post_regrid() 1 0.001473 0.001651 0.002015 0.06% Castro::finalize_do_advance() 10 0.0005449 0.0008855 0.001071 0.03% Amr::InitAmr() 1 0.000303 0.0004429 0.000544 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 2.224e-05 0.0001501 0.0003213 0.01% DistributionMapping::LeastUsedCPUs() 1 1.482e-05 0.0001435 0.0003147 0.01% Castro::enforce_consistent_e() 1 7.843e-05 9.683e-05 0.0001349 0.00% FabArrayBase::getCPC() 41 7.029e-05 8.539e-05 0.0001029 0.00% Amr::writeSmallPlotFile() 1 2.639e-05 5.419e-05 7.09e-05 0.00% Castro::enforce_speed_limit() 62 2.608e-05 3.475e-05 4.682e-05 0.00% FabArrayBase::CPC::define() 2 2.174e-05 2.55e-05 3.228e-05 0.00% Gravity::swapTimeLevels() 10 1.186e-05 1.463e-05 1.805e-05 0.00% Amr::initSubcycle() 1 8.53e-06 1.375e-05 1.762e-05 0.00% Castro::create_source_corrector() 10 9.661e-06 1.099e-05 1.292e-05 0.00% Castro::FluxRegCrseInit 10 7.443e-06 1.031e-05 1.18e-05 0.00% Gravity::set_mass_offset() 10 8.601e-06 9.791e-06 1.081e-05 0.00% Castro::retry_advance_ctu() 10 4.945e-06 5.552e-06 6.063e-06 0.00% Castro::FluxRegFineAdd() 10 1.849e-06 2.339e-06 2.83e-06 0.00% DistributionMapping::Distribute() 1 1.196e-06 1.46e-06 1.742e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-37-g3cc4a66759c9) finalized