MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-37-g3cc4a66759c9) initialized Starting run at 05:37:25 UTC on 2022-04-28. Successfully read inputs file ... Castro git describe: 22.04-37-gb93839ec1 AMReX git describe: 22.04-37-g3cc4a6675 Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012692531 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.335372886 [STEP 1] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327981211 [STEP 2] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.308711916 [STEP 3] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.310975287 [STEP 4] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.310753162 [STEP 5] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.334744487 [STEP 6] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.297318392 [STEP 7] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.290401279 [STEP 8] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.290189405 [STEP 9] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.289914581 [STEP 10] FAB kilobyte spread across MPI nodes: [58480 ... 58480] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009479176 seconds Ending run at 05:37:28 UTC on 2022-04-28. Run time = 3.289400705 Run time without initialization = 3.109680668 Average number of zones advanced per microsecond: 0.843 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.289 ... 3.289 ... 3.289 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1358 2.1730 2.2168 67.39% Gravity::make_radial_gravity() 21 0.3247 0.3364 0.3538 10.76% Castro::do_advance_ctu() 10 0.0429 0.08739 0.1248 3.79% Castro::initData() 1 0.03971 0.07897 0.1215 3.69% Castro::estTimeStep() 21 0.01826 0.06575 0.1053 3.20% FabArray::setVal() 143 0.05966 0.06898 0.07508 2.28% FabArray::ParallelCopy_finish() 41 0.03075 0.04149 0.07256 2.21% Castro::reset_internal_energy() 63 0.04785 0.04909 0.05066 1.54% StateData::FillBoundary(geom) 41 0.03673 0.04032 0.04526 1.38% Castro::normalize_species() 62 0.04116 0.04171 0.04215 1.28% FabArray::ParallelCopy_nowait() 41 0.03337 0.03927 0.0412 1.25% FillPatchIterator::Initialize 41 0.02279 0.02849 0.03136 0.95% Gravity::interpolate_monopole_grav() 21 0.02723 0.02762 0.02797 0.85% Castro::construct_new_gravity_source() 10 0.02008 0.02329 0.02579 0.78% Castro::expand_state() 10 0.01212 0.01813 0.02056 0.63% Castro::computeTemp() 63 0.01755 0.01845 0.01934 0.59% Castro::initialize_do_advance() 10 0.01017 0.01592 0.01759 0.53% MultiFab::Saxpy() 20 0.01288 0.01453 0.0159 0.48% VisMF::Write(FabArray) 2 0.01138 0.01206 0.01418 0.43% Castro::initialize_advance() 10 0.008592 0.01154 0.01365 0.42% Gravity::get_new_grav_vector() 11 0.009597 0.0108 0.01317 0.40% MultiFab::contains_nan() 20 0.01016 0.01109 0.01242 0.38% Castro::construct_old_gravity_source() 10 0.007121 0.0106 0.01151 0.35% Amr::writePlotFile() 2 0.00822 0.01053 0.01144 0.35% FabArray::setDomainBndry() 41 0.006804 0.009297 0.01084 0.33% Gravity::get_old_grav_vector() 10 0.006711 0.008747 0.01044 0.32% Amr::defBaseLevel() 1 0.006486 0.007457 0.009619 0.29% Castro::construct_new_source() 50 0.005715 0.006335 0.006704 0.20% Castro::enforce_min_density() 62 0.005797 0.006117 0.006441 0.20% StateData::define() 4 0.004269 0.004927 0.006313 0.19% main() 1 0.003405 0.003716 0.00396 0.12% Castro::swap_state_time_levels() 10 0.002416 0.003424 0.003716 0.11% Amr::coarseTimeStep() 10 0.0003111 0.0007465 0.001618 0.05% Castro::finalize_do_advance() 10 0.0004672 0.0008469 0.00101 0.03% Amr::InitAmr() 1 0.0002758 0.0003439 0.0005864 0.02% Amr::timeStep() 10 0.0001657 0.0002261 0.000445 0.01% DistributionMapping::LeastUsedCPUs() 1 9.54e-06 0.0002943 0.0003724 0.01% Castro::clean_state() 62 0.0001243 0.0001461 0.0001821 0.01% StateDataPhysBCFunct::() 41 0.0001195 0.0001342 0.0001714 0.01% Castro::enforce_consistent_e() 1 8.242e-05 8.694e-05 9.47e-05 0.00% Castro::construct_old_source() 50 5.723e-05 7.406e-05 8.742e-05 0.00% FabArrayBase::getCPC() 41 4.922e-05 5.71e-05 7.817e-05 0.00% Castro::subcycle_advance_ctu() 10 3.936e-05 5.253e-05 7.793e-05 0.00% FillPatchSingleLevel 41 5.943e-05 6.583e-05 7.618e-05 0.00% FabArray::ParallelCopy() 41 6.602e-05 7.164e-05 7.578e-05 0.00% Castro::do_new_sources() 10 5.375e-05 6.139e-05 7.321e-05 0.00% Castro::construct_old_gravity() 10 5.224e-05 5.953e-05 7.205e-05 0.00% Amr::writeSmallPlotFile() 1 2.37e-05 5.322e-05 6.979e-05 0.00% Castro::do_old_sources() 10 5.677e-05 6.307e-05 6.722e-05 0.00% Amr::FinalizeInit() 1 3.521e-06 1.149e-05 6.231e-05 0.00% Castro::finalize_advance() 10 4.87e-05 5.099e-05 5.43e-05 0.00% Castro::apply_source_to_state() 20 3.938e-05 4.751e-05 5.365e-05 0.00% Castro::construct_new_gravity() 10 3.908e-05 4.679e-05 5.298e-05 0.00% Castro::advance() 10 3.61e-05 4.057e-05 4.624e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 3.293e-05 4.173e-05 0.00% FabArrayBase::CPC::define() 2 1.972e-05 2.399e-05 2.786e-05 0.00% Castro::check_for_nan() 20 2.146e-05 2.437e-05 2.659e-05 0.00% Castro::create_source_corrector() 10 1.454e-05 1.836e-05 2.173e-05 0.00% Gravity::swapTimeLevels() 10 1.312e-05 1.462e-05 1.585e-05 0.00% Amr::initSubcycle() 1 7.934e-06 1.023e-05 1.516e-05 0.00% Castro::computeNewDt() 9 6.387e-06 8.186e-06 1.312e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.974e-06 8.899e-06 1.27e-05 0.00% Castro::post_timestep() 10 7.598e-06 1.002e-05 1.174e-05 0.00% Castro::post_init() 1 7.798e-06 9.169e-06 1.04e-05 0.00% Gravity::set_mass_offset() 10 7.411e-06 8.318e-06 1.018e-05 0.00% Amr::InitializeInit() 1 2.112e-06 3.263e-06 8.672e-06 0.00% Castro::retry_advance_ctu() 10 4.771e-06 6.129e-06 7.436e-06 0.00% Castro::FluxRegFineAdd() 10 5.143e-06 6.167e-06 6.84e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.022e-06 4.595e-06 5.546e-06 0.00% Castro::computeInitialDt() 2 2.425e-06 3.459e-06 4.425e-06 0.00% Castro::post_regrid() 1 2.027e-06 3.26e-06 4.338e-06 0.00% Amr::init() 1 1.754e-06 2.29e-06 3.378e-06 0.00% Amr::initialInit() 1 1.385e-06 1.696e-06 2.085e-06 0.00% DistributionMapping::Distribute() 1 9.41e-07 1.192e-06 1.678e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.289 3.289 3.289 100.00% Amr::coarseTimeStep() 10 3.096 3.096 3.096 94.13% Amr::timeStep() 10 3.087 3.087 3.088 93.87% Castro::advance() 10 3.071 3.071 3.072 93.38% Castro::subcycle_advance_ctu() 10 2.996 2.999 3.008 91.46% Castro::do_advance_ctu() 10 2.996 2.999 3.008 91.45% Castro::construct_ctu_hydro_source() 10 2.136 2.173 2.217 67.39% Gravity::make_radial_gravity() 21 0.3247 0.3364 0.3538 10.76% Gravity::get_new_grav_vector() 11 0.2162 0.2177 0.2186 6.65% Castro::construct_old_gravity() 10 0.1941 0.2017 0.2162 6.57% Gravity::get_old_grav_vector() 10 0.1933 0.2009 0.2156 6.55% Castro::construct_new_gravity() 10 0.1932 0.1943 0.1951 5.93% Amr::init() 1 0.1789 0.1792 0.1793 5.45% FillPatchIterator::Initialize 41 0.1499 0.1592 0.1727 5.25% Amr::initialInit() 1 0.1661 0.1662 0.1664 5.06% Castro::initialize_do_advance() 10 0.1458 0.1515 0.1561 4.74% FillPatchSingleLevel 41 0.1149 0.1214 0.1431 4.35% Amr::InitializeInit() 1 0.05976 0.09744 0.1397 4.25% Amr::defBaseLevel() 1 0.05975 0.09744 0.1397 4.25% Castro::initData() 1 0.04327 0.08283 0.125 3.80% Castro::clean_state() 62 0.1131 0.1146 0.1163 3.54% Castro::expand_state() 10 0.09982 0.1054 0.1098 3.34% Amr::FinalizeInit() 1 0.02656 0.06877 0.1064 3.23% FabArray::ParallelCopy() 41 0.07204 0.08091 0.1061 3.23% Castro::estTimeStep() 21 0.01826 0.06575 0.1053 3.20% Castro::computeInitialDt() 2 0.001579 0.04383 0.08123 2.47% Castro::initialize_advance() 10 0.06252 0.07211 0.07516 2.28% FabArray::setVal() 143 0.05966 0.06898 0.07508 2.28% FabArray::ParallelCopy_finish() 41 0.03075 0.04149 0.07256 2.21% Castro::computeTemp() 63 0.06583 0.06753 0.0694 2.11% Castro::do_new_sources() 10 0.05669 0.0624 0.06814 2.07% Castro::reset_internal_energy() 63 0.04785 0.04909 0.05066 1.54% Castro::do_old_sources() 10 0.04029 0.04601 0.04705 1.43% StateDataPhysBCFunct::() 41 0.03688 0.04046 0.0454 1.38% StateData::FillBoundary(geom) 41 0.03673 0.04032 0.04526 1.38% Castro::normalize_species() 62 0.04116 0.04171 0.04215 1.28% FabArray::ParallelCopy_nowait() 41 0.03348 0.03935 0.04127 1.25% Castro::construct_new_source() 50 0.02579 0.02962 0.03233 0.98% Gravity::interpolate_monopole_grav() 21 0.02723 0.02762 0.02797 0.85% Castro::construct_new_gravity_source() 10 0.02008 0.02329 0.02579 0.78% Castro::post_init() 1 0.024 0.02426 0.02439 0.74% Amr::writePlotFile() 2 0.0224 0.02259 0.02282 0.69% Castro::post_timestep() 10 0.01491 0.01563 0.01627 0.49% Castro::apply_source_to_state() 20 0.01294 0.01458 0.01595 0.48% MultiFab::Saxpy() 20 0.01288 0.01453 0.0159 0.48% VisMF::Write(FabArray) 2 0.01138 0.01206 0.01418 0.43% Castro::check_for_nan() 20 0.01018 0.01112 0.01245 0.38% MultiFab::contains_nan() 20 0.01016 0.01109 0.01242 0.38% Castro::construct_old_source() 50 0.007178 0.01067 0.0116 0.35% Castro::construct_old_gravity_source() 10 0.007121 0.0106 0.01151 0.35% FabArray::setDomainBndry() 41 0.006804 0.009297 0.01084 0.33% Castro::computeNewDt() 9 0.00694 0.007429 0.008122 0.25% Castro::enforce_min_density() 62 0.005797 0.006117 0.006441 0.20% AmrLevel::AmrLevel(dm) 1 0.004277 0.004936 0.006324 0.19% StateData::define() 4 0.004269 0.004927 0.006313 0.19% Castro::swap_state_time_levels() 10 0.002416 0.003424 0.003716 0.11% Castro::post_regrid() 1 0.001509 0.001569 0.001641 0.05% Castro::finalize_do_advance() 10 0.0004672 0.0008469 0.00101 0.03% Amr::InitAmr() 1 0.0002838 0.0003542 0.0006008 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.526e-05 0.0003001 0.0003792 0.01% DistributionMapping::LeastUsedCPUs() 1 9.54e-06 0.0002943 0.0003724 0.01% FabArrayBase::getCPC() 41 7.09e-05 8.109e-05 0.0001043 0.00% Castro::enforce_consistent_e() 1 8.242e-05 8.694e-05 9.47e-05 0.00% Amr::writeSmallPlotFile() 1 2.37e-05 5.322e-05 6.979e-05 0.00% Castro::finalize_advance() 10 5.423e-05 5.716e-05 6.112e-05 0.00% Castro::enforce_speed_limit() 62 2.635e-05 3.293e-05 4.173e-05 0.00% FabArrayBase::CPC::define() 2 1.972e-05 2.399e-05 2.786e-05 0.00% Castro::create_source_corrector() 10 1.454e-05 1.836e-05 2.173e-05 0.00% Gravity::swapTimeLevels() 10 1.312e-05 1.462e-05 1.585e-05 0.00% Amr::initSubcycle() 1 7.934e-06 1.023e-05 1.516e-05 0.00% Gravity::set_mass_offset() 10 7.411e-06 8.318e-06 1.018e-05 0.00% Castro::retry_advance_ctu() 10 4.771e-06 6.129e-06 7.436e-06 0.00% Castro::FluxRegFineAdd() 10 5.143e-06 6.167e-06 6.84e-06 0.00% DistributionMapping::Distribute() 1 9.41e-07 1.192e-06 1.678e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-37-g3cc4a66759c9) finalized