MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-39-g50466d11e7b2) initialized Starting run at 22:04:03 UTC on 2022-04-30. Successfully read inputs file ... Castro git describe: 22.04-49-g7653ce36f AMReX git describe: 22.04-39-g50466d11e Microphysics git describe: 22.04-3-g3c498521 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012451376 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.360464229 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.327479358 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.315462324 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.314275523 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.315444439 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341806512 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.305544438 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.303995844 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.304257502 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.304792065 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.040876236 seconds Ending run at 22:04:07 UTC on 2022-04-30. Run time = 3.4334318 Run time without initialization = 3.238141175 Average number of zones advanced per microsecond: 0.810 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.433 ... 3.433 ... 3.433 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1626 2.2473 2.2742 66.24% Gravity::make_radial_gravity() 21 0.3348 0.3409 0.3618 10.54% Castro::do_advance_ctu() 10 0.07613 0.1044 0.1864 5.43% Castro::initData() 1 0.04358 0.0867 0.1372 4.00% Castro::estTimeStep() 21 0.01913 0.07257 0.1227 3.57% FabArray::ParallelCopy_finish() 41 0.03021 0.04018 0.08563 2.49% FabArray::setVal() 143 0.05231 0.06667 0.07163 2.09% Castro::reset_internal_energy(Fab) 1008 0.04806 0.0501 0.05171 1.51% VisMF::Write(FabArray) 2 0.04246 0.04324 0.04619 1.35% Castro::normalize_species() 62 0.04105 0.0422 0.04429 1.29% StateData::FillBoundary(geom) 41 0.03741 0.0411 0.04345 1.27% FabArray::ParallelCopy_nowait() 41 0.03365 0.0398 0.04103 1.20% FillPatchIterator::Initialize 41 0.02308 0.02883 0.03182 0.93% Gravity::interpolate_monopole_grav() 21 0.02767 0.028 0.02836 0.83% Castro::construct_new_gravity_source() 10 0.02032 0.02349 0.02582 0.75% Castro::expand_state() 10 0.01164 0.01854 0.02085 0.61% Castro::computeTemp() 63 0.01765 0.01868 0.01937 0.56% Castro::initialize_do_advance() 10 0.0101 0.01575 0.01747 0.51% MultiFab::Saxpy() 20 0.01297 0.01487 0.01571 0.46% Gravity::get_new_grav_vector() 11 0.009266 0.01093 0.01326 0.39% Castro::initialize_advance() 10 0.003883 0.01025 0.01293 0.38% MultiFab::contains_nan() 20 0.009907 0.01098 0.01184 0.34% Castro::construct_old_gravity_source() 10 0.007365 0.01089 0.0116 0.34% FabArray::setDomainBndry() 41 0.00663 0.009553 0.0114 0.33% Amr::writePlotFile() 2 0.007433 0.01022 0.01115 0.32% Gravity::get_old_grav_vector() 10 0.006737 0.008813 0.01027 0.30% Castro::initMFs() 1 0.005369 0.006714 0.007781 0.23% Castro::enforce_min_density() 62 0.006558 0.006849 0.00737 0.21% Castro::construct_new_source() 50 0.005715 0.006482 0.006862 0.20% StateData::define() 4 0.004418 0.005448 0.006294 0.18% main() 1 0.003461 0.003677 0.003806 0.11% Castro::swap_state_time_levels() 10 0.001677 0.003479 0.003765 0.11% Castro::buildMetrics() 1 0.001254 0.001576 0.001826 0.05% Amr::coarseTimeStep() 10 0.0003564 0.0006252 0.001629 0.05% Castro::finalize_do_advance() 10 0.0004044 0.001025 0.001259 0.04% Amr::timeStep() 10 0.0001748 0.0002351 0.0004937 0.01% Amr::InitAmr() 1 0.0002869 0.0003972 0.0004716 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002916 0.0003095 0.000337 0.01% DistributionMapping::LeastUsedCPUs() 1 8.2e-06 9.514e-05 0.0002194 0.01% Castro::clean_state() 62 0.0001454 0.0001627 0.0001746 0.01% StateDataPhysBCFunct::() 41 0.0001313 0.0001496 0.0001708 0.00% Castro::enforce_consistent_e() 1 7.644e-05 8.744e-05 0.0001016 0.00% Castro::do_old_sources() 10 4.875e-05 6.365e-05 8.615e-05 0.00% Castro::construct_old_source() 50 5.109e-05 7.097e-05 8.234e-05 0.00% Amr::FinalizeInit() 1 3.259e-06 1.356e-05 7.68e-05 0.00% Castro::do_new_sources() 10 5.445e-05 6.536e-05 7.645e-05 0.00% Castro::Castro() 1 4.787e-05 6.107e-05 7.18e-05 0.00% FabArray::ParallelCopy() 41 5.989e-05 6.571e-05 7.109e-05 0.00% FillPatchSingleLevel 41 6.071e-05 6.481e-05 7.091e-05 0.00% Castro::subcycle_advance_ctu() 10 5.037e-05 6.022e-05 7.015e-05 0.00% Amr::writeSmallPlotFile() 1 2.587e-05 5.809e-05 6.756e-05 0.00% FabArrayBase::getCPC() 41 4.8e-05 5.337e-05 6.495e-05 0.00% Castro::finalize_advance() 10 5.198e-05 5.406e-05 5.586e-05 0.00% Castro::construct_old_gravity() 10 4.788e-05 5.122e-05 5.556e-05 0.00% Castro::apply_source_to_state() 20 3.776e-05 4.658e-05 5.289e-05 0.00% Castro::advance() 10 3.633e-05 4.061e-05 4.934e-05 0.00% Castro::construct_new_gravity() 10 3.582e-05 4.196e-05 4.841e-05 0.00% Castro::enforce_speed_limit() 62 2.586e-05 3.043e-05 4.237e-05 0.00% Amr::defBaseLevel() 1 2.65e-05 3.127e-05 3.823e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.544e-05 2.909e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.276e-05 2.263e-05 2.714e-05 0.00% Castro::check_for_nan() 20 2.034e-05 2.204e-05 2.387e-05 0.00% Castro::post_regrid() 1 2.215e-06 6.028e-06 2.292e-05 0.00% Gravity::swapTimeLevels() 10 9.197e-06 1.296e-05 1.788e-05 0.00% Amr::initSubcycle() 1 8.732e-06 1.211e-05 1.501e-05 0.00% Castro::post_timestep() 10 9.347e-06 1.147e-05 1.429e-05 0.00% Castro::post_init() 1 8.513e-06 1.037e-05 1.346e-05 0.00% Castro::create_source_corrector() 10 8.61e-06 1.032e-05 1.214e-05 0.00% Castro::FluxRegCrseInit 10 8.252e-06 9.277e-06 1.127e-05 0.00% Gravity::set_mass_offset() 10 9.822e-06 1.047e-05 1.119e-05 0.00% Castro::computeNewDt() 9 8.457e-06 9.387e-06 1.06e-05 0.00% Amr::InitializeInit() 1 2.247e-06 3.669e-06 6.863e-06 0.00% Castro::computeInitialDt() 2 3.101e-06 4.255e-06 6.678e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.96e-06 5.147e-06 6.604e-06 0.00% Castro::retry_advance_ctu() 10 4.691e-06 5.41e-06 5.985e-06 0.00% Amr::init() 1 1.971e-06 2.327e-06 2.804e-06 0.00% Castro::FluxRegFineAdd() 10 2.135e-06 2.312e-06 2.76e-06 0.00% Amr::initialInit() 1 1.433e-06 1.839e-06 2.346e-06 0.00% DistributionMapping::Distribute() 1 1.103e-06 1.44e-06 1.697e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.433 3.433 3.433 100.00% Amr::coarseTimeStep() 10 3.193 3.193 3.193 93.01% Amr::timeStep() 10 3.184 3.184 3.185 92.75% Castro::advance() 10 3.167 3.168 3.168 92.27% Castro::subcycle_advance_ctu() 10 3.095 3.099 3.118 90.81% Castro::do_advance_ctu() 10 3.094 3.099 3.118 90.81% Castro::construct_ctu_hydro_source() 10 2.163 2.247 2.274 66.24% Gravity::make_radial_gravity() 21 0.3348 0.3409 0.3618 10.54% Gravity::get_new_grav_vector() 11 0.2194 0.2217 0.2228 6.49% Castro::construct_old_gravity() 10 0.198 0.2029 0.221 6.44% Gravity::get_old_grav_vector() 10 0.1972 0.2021 0.2204 6.42% Castro::construct_new_gravity() 10 0.1979 0.1989 0.1999 5.82% Amr::init() 1 0.1947 0.1947 0.1949 5.68% FillPatchIterator::Initialize 41 0.1495 0.1598 0.1868 5.44% Amr::initialInit() 1 0.1821 0.1823 0.1824 5.31% Castro::initialize_do_advance() 10 0.1459 0.1526 0.1581 4.60% FillPatchSingleLevel 41 0.1137 0.1214 0.1571 4.57% Amr::InitializeInit() 1 0.06127 0.1065 0.1558 4.54% Amr::defBaseLevel() 1 0.06127 0.1065 0.1558 4.54% Castro::initData() 1 0.04715 0.09058 0.1415 4.12% Castro::estTimeStep() 21 0.01913 0.07257 0.1227 3.57% Castro::clean_state() 62 0.1138 0.1174 0.1217 3.55% Amr::FinalizeInit() 1 0.02657 0.07577 0.1208 3.52% FabArray::ParallelCopy() 41 0.07105 0.08013 0.1194 3.48% Castro::expand_state() 10 0.09846 0.1062 0.1189 3.46% Castro::computeInitialDt() 2 0.001813 0.05105 0.09624 2.80% FabArray::ParallelCopy_finish() 41 0.03021 0.04018 0.08563 2.49% Castro::initialize_advance() 10 0.04924 0.06898 0.07328 2.13% FabArray::setVal() 143 0.05231 0.06667 0.07163 2.09% Castro::computeTemp() 63 0.06602 0.06909 0.07126 2.08% Castro::do_new_sources() 10 0.05771 0.06317 0.06835 1.99% Amr::writePlotFile() 2 0.05333 0.05346 0.05363 1.56% Castro::reset_internal_energy(MultiFab) 63 0.04837 0.05041 0.05201 1.51% Castro::reset_internal_energy(Fab) 1008 0.04806 0.0501 0.05171 1.51% Castro::do_old_sources() 10 0.04074 0.04702 0.04849 1.41% VisMF::Write(FabArray) 2 0.04246 0.04324 0.04619 1.35% Castro::normalize_species() 62 0.04105 0.0422 0.04429 1.29% StateDataPhysBCFunct::() 41 0.03756 0.04125 0.04361 1.27% StateData::FillBoundary(geom) 41 0.03741 0.0411 0.04345 1.27% FabArray::ParallelCopy_nowait() 41 0.03374 0.03988 0.0411 1.20% Castro::construct_new_source() 50 0.02604 0.02997 0.03268 0.95% Gravity::interpolate_monopole_grav() 21 0.02767 0.028 0.02836 0.83% Castro::construct_new_gravity_source() 10 0.02032 0.02349 0.02582 0.75% Castro::post_init() 1 0.02367 0.02392 0.02411 0.70% Castro::post_timestep() 10 0.01541 0.01601 0.01666 0.49% Castro::apply_source_to_state() 20 0.01301 0.01492 0.01576 0.46% MultiFab::Saxpy() 20 0.01297 0.01487 0.01571 0.46% Castro::Castro() 1 0.008233 0.01029 0.01193 0.35% Castro::check_for_nan() 20 0.009927 0.011 0.01187 0.35% MultiFab::contains_nan() 20 0.009907 0.01098 0.01184 0.34% Castro::construct_old_source() 50 0.007416 0.01096 0.01167 0.34% Castro::construct_old_gravity_source() 10 0.007365 0.01089 0.0116 0.34% FabArray::setDomainBndry() 41 0.00663 0.009553 0.0114 0.33% Castro::computeNewDt() 9 0.007033 0.00781 0.008545 0.25% Castro::initMFs() 1 0.005369 0.006714 0.007781 0.23% Castro::enforce_min_density() 62 0.006558 0.006849 0.00737 0.21% AmrLevel::AmrLevel(dm) 1 0.004431 0.00547 0.006319 0.18% StateData::define() 4 0.004418 0.005448 0.006294 0.18% Castro::swap_state_time_levels() 10 0.001677 0.003479 0.003765 0.11% Castro::buildMetrics() 1 0.001371 0.00175 0.002059 0.06% Castro::post_regrid() 1 0.001593 0.001665 0.001958 0.06% Castro::finalize_do_advance() 10 0.0004044 0.001025 0.001259 0.04% Amr::InitAmr() 1 0.000296 0.0004093 0.0004865 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.46e-05 0.0001017 0.0002271 0.01% DistributionMapping::LeastUsedCPUs() 1 8.2e-06 9.514e-05 0.0002194 0.01% Castro::enforce_consistent_e() 1 7.644e-05 8.744e-05 0.0001016 0.00% FabArrayBase::getCPC() 41 7.184e-05 7.881e-05 9.043e-05 0.00% Castro::finalize_advance() 10 6.452e-05 6.565e-05 6.76e-05 0.00% Amr::writeSmallPlotFile() 1 2.587e-05 5.809e-05 6.756e-05 0.00% Castro::enforce_speed_limit() 62 2.586e-05 3.043e-05 4.237e-05 0.00% FabArrayBase::CPC::define() 2 2.234e-05 2.544e-05 2.909e-05 0.00% Gravity::swapTimeLevels() 10 9.197e-06 1.296e-05 1.788e-05 0.00% Amr::initSubcycle() 1 8.732e-06 1.211e-05 1.501e-05 0.00% Castro::create_source_corrector() 10 8.61e-06 1.032e-05 1.214e-05 0.00% Castro::FluxRegCrseInit 10 8.252e-06 9.277e-06 1.127e-05 0.00% Gravity::set_mass_offset() 10 9.822e-06 1.047e-05 1.119e-05 0.00% Castro::retry_advance_ctu() 10 4.691e-06 5.41e-06 5.985e-06 0.00% Castro::FluxRegFineAdd() 10 2.135e-06 2.312e-06 2.76e-06 0.00% DistributionMapping::Distribute() 1 1.103e-06 1.44e-06 1.697e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-39-g50466d11e7b2) finalized