MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.04-39-g50466d11e7b2) initialized Starting run at 13:40:12 UTC on 2022-05-01. Successfully read inputs file ... Castro git describe: 22.04-55-g89366d681 AMReX git describe: 22.04-39-g50466d11e Microphysics git describe: 22.04-5-g61c46f9e reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013472984 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.357635122 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.331062194 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.318747515 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.316387034 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.314779019 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341481935 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.302145434 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.300339459 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.299047239 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.338441864 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009289505 seconds Ending run at 13:40:16 UTC on 2022-05-01. Run time = 3.445731821 Run time without initialization = 3.232679261 Average number of zones advanced per microsecond: 0.811 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.445 ... 3.446 ... 3.446 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2108 2.2537 2.3016 66.79% Gravity::make_radial_gravity() 21 0.3385 0.344 0.3615 10.49% Castro::do_advance_ctu() 10 0.0637 0.1145 0.1564 4.54% Castro::initData() 1 0.04562 0.09466 0.1475 4.28% Castro::estTimeStep() 21 0.02477 0.07809 0.1327 3.85% FabArray::ParallelCopy_finish() 41 0.03641 0.05172 0.09139 2.65% FabArray::setVal() 143 0.05192 0.06632 0.07193 2.09% Castro::reset_internal_energy(Fab) 1008 0.04884 0.05054 0.0518 1.50% Castro::normalize_species() 62 0.04151 0.04213 0.04361 1.27% FabArray::ParallelCopy_nowait() 41 0.03592 0.0395 0.04267 1.24% StateData::FillBoundary(geom) 41 0.03916 0.04038 0.042 1.22% FillPatchIterator::Initialize 41 0.02273 0.02876 0.03336 0.97% Gravity::interpolate_monopole_grav() 21 0.02788 0.02809 0.02869 0.83% Castro::construct_new_gravity_source() 10 0.02049 0.02353 0.02657 0.77% Castro::computeTemp() 63 0.01844 0.01937 0.02303 0.67% Castro::expand_state() 10 0.01213 0.01791 0.02006 0.58% MultiFab::Saxpy() 20 0.01296 0.01526 0.0193 0.56% Castro::initialize_do_advance() 10 0.01017 0.0154 0.01659 0.48% VisMF::Write(FabArray) 2 0.01178 0.01222 0.01446 0.42% Castro::initialize_advance() 10 0.003852 0.01019 0.0135 0.39% Gravity::get_new_grav_vector() 11 0.009673 0.0108 0.01256 0.36% MultiFab::contains_nan() 20 0.01036 0.01104 0.01187 0.34% Castro::construct_old_gravity_source() 10 0.007218 0.01058 0.01139 0.33% Amr::writePlotFile() 2 0.008525 0.0106 0.01114 0.32% FabArray::setDomainBndry() 41 0.006739 0.009109 0.01074 0.31% Gravity::get_old_grav_vector() 10 0.006647 0.008596 0.009788 0.28% Castro::initMFs() 1 0.005247 0.00664 0.007853 0.23% Castro::enforce_min_density() 62 0.006536 0.006877 0.007496 0.22% Castro::construct_new_source() 50 0.005841 0.006484 0.006883 0.20% StateData::define() 4 0.004296 0.005368 0.006303 0.18% Castro::swap_state_time_levels() 10 0.002513 0.003545 0.004197 0.12% main() 1 0.003705 0.003852 0.004017 0.12% Castro::buildMetrics() 1 0.001224 0.001551 0.001836 0.05% Amr::coarseTimeStep() 10 0.0003775 0.0006867 0.00142 0.04% Castro::finalize_do_advance() 10 0.0004727 0.0009651 0.001215 0.04% Amr::InitAmr() 1 0.0002719 0.0003891 0.0006179 0.02% Amr::timeStep() 10 0.0001597 0.000216 0.0004929 0.01% DistributionMapping::LeastUsedCPUs() 1 1.083e-05 0.0002803 0.0004195 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000286 0.0003149 0.0003585 0.01% Castro::clean_state() 62 0.0001394 0.0001665 0.0002042 0.01% StateDataPhysBCFunct::() 41 0.0001257 0.0001495 0.0001783 0.01% Castro::enforce_consistent_e() 1 7.916e-05 0.0001111 0.0001586 0.00% FabArray::ParallelCopy() 41 5.803e-05 7.184e-05 9.467e-05 0.00% Castro::apply_source_to_state() 20 4.008e-05 5.221e-05 9.227e-05 0.00% Castro::construct_old_source() 50 6.211e-05 7.572e-05 8.78e-05 0.00% FillPatchSingleLevel 41 5.68e-05 6.594e-05 7.59e-05 0.00% Amr::FinalizeInit() 1 4.082e-06 1.384e-05 7.557e-05 0.00% Castro::do_new_sources() 10 5.272e-05 6.471e-05 7.453e-05 0.00% FabArrayBase::getCPC() 41 4.609e-05 5.487e-05 7.306e-05 0.00% Castro::do_old_sources() 10 5.031e-05 6.366e-05 7.293e-05 0.00% Castro::subcycle_advance_ctu() 10 5.199e-05 6.173e-05 7.26e-05 0.00% Castro::Castro() 1 5.114e-05 6.17e-05 7.201e-05 0.00% Amr::writeSmallPlotFile() 1 3.594e-05 5.747e-05 6.476e-05 0.00% Castro::construct_old_gravity() 10 4.801e-05 5.288e-05 5.999e-05 0.00% Castro::construct_new_gravity() 10 3.644e-05 4.326e-05 5.7e-05 0.00% Castro::finalize_advance() 10 4.896e-05 5.316e-05 5.628e-05 0.00% Castro::advance() 10 3.313e-05 3.983e-05 4.376e-05 0.00% Castro::enforce_speed_limit() 62 2.734e-05 2.979e-05 3.387e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.511e-05 2.609e-05 3.182e-05 0.00% FabArrayBase::CPC::define() 2 2.181e-05 2.529e-05 3.101e-05 0.00% Amr::defBaseLevel() 1 2.426e-05 2.859e-05 3.078e-05 0.00% Castro::check_for_nan() 20 2.285e-05 2.53e-05 2.997e-05 0.00% Gravity::swapTimeLevels() 10 1.224e-05 1.442e-05 1.833e-05 0.00% Amr::initSubcycle() 1 8.465e-06 1.28e-05 1.742e-05 0.00% Castro::post_init() 1 8.085e-06 1.086e-05 1.358e-05 0.00% Gravity::set_mass_offset() 10 8.529e-06 1.106e-05 1.284e-05 0.00% Castro::post_timestep() 10 9.518e-06 1.105e-05 1.249e-05 0.00% Castro::create_source_corrector() 10 8.532e-06 1.061e-05 1.242e-05 0.00% Castro::FluxRegCrseInit 10 8.122e-06 9.601e-06 1.14e-05 0.00% Castro::computeNewDt() 9 8.09e-06 8.635e-06 9.225e-06 0.00% Amr::InitializeInit() 1 2.188e-06 3.478e-06 9.165e-06 0.00% Castro::retry_advance_ctu() 10 4.447e-06 5.745e-06 7.138e-06 0.00% Castro::post_regrid() 1 1.767e-06 4.213e-06 6.932e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.318e-06 4.903e-06 5.94e-06 0.00% Castro::computeInitialDt() 2 3.935e-06 4.573e-06 5.408e-06 0.00% Castro::FluxRegFineAdd() 10 2.026e-06 2.504e-06 3.565e-06 0.00% Amr::init() 1 1.994e-06 2.433e-06 3.022e-06 0.00% Amr::initialInit() 1 1.115e-06 1.556e-06 1.878e-06 0.00% DistributionMapping::Distribute() 1 1.037e-06 1.283e-06 1.651e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.445 3.446 3.446 100.00% Amr::coarseTimeStep() 10 3.219 3.219 3.219 93.43% Amr::timeStep() 10 3.209 3.21 3.21 93.17% Castro::advance() 10 3.193 3.194 3.194 92.69% Castro::subcycle_advance_ctu() 10 3.121 3.125 3.143 91.23% Castro::do_advance_ctu() 10 3.121 3.124 3.143 91.22% Castro::construct_ctu_hydro_source() 10 2.211 2.254 2.302 66.79% Gravity::make_radial_gravity() 21 0.3385 0.344 0.3615 10.49% Gravity::get_new_grav_vector() 11 0.2215 0.223 0.2243 6.51% Castro::construct_old_gravity() 10 0.1991 0.2049 0.2196 6.37% Gravity::get_old_grav_vector() 10 0.1983 0.2041 0.219 6.35% Amr::init() 1 0.2122 0.2125 0.2126 6.17% Amr::initialInit() 1 0.1986 0.1991 0.1993 5.78% Castro::construct_new_gravity() 10 0.1971 0.1977 0.1983 5.75% FillPatchIterator::Initialize 41 0.1544 0.1698 0.1965 5.70% Amr::InitializeInit() 1 0.06394 0.1151 0.1701 4.94% Amr::defBaseLevel() 1 0.06393 0.1151 0.1701 4.94% FillPatchSingleLevel 41 0.1196 0.132 0.167 4.85% Castro::initialize_do_advance() 10 0.1476 0.1544 0.162 4.70% Castro::initData() 1 0.0496 0.09918 0.1515 4.40% Amr::FinalizeInit() 1 0.02885 0.08392 0.1354 3.93% Castro::estTimeStep() 21 0.02477 0.07809 0.1327 3.85% FabArray::ParallelCopy() 41 0.07922 0.09137 0.1275 3.70% Castro::expand_state() 10 0.1006 0.1086 0.1231 3.57% Castro::clean_state() 62 0.1149 0.1182 0.1222 3.55% Castro::computeInitialDt() 2 0.001698 0.05678 0.1081 3.14% FabArray::ParallelCopy_finish() 41 0.03641 0.05172 0.09139 2.65% Castro::computeTemp() 63 0.06757 0.07022 0.07399 2.15% Castro::initialize_advance() 10 0.04969 0.06911 0.07273 2.11% FabArray::setVal() 143 0.05192 0.06632 0.07193 2.09% Castro::do_new_sources() 10 0.05823 0.06309 0.06789 1.97% Castro::do_old_sources() 10 0.04065 0.04766 0.05412 1.57% Castro::reset_internal_energy(MultiFab) 63 0.04912 0.05085 0.05211 1.51% Castro::reset_internal_energy(Fab) 1008 0.04884 0.05054 0.0518 1.50% Castro::normalize_species() 62 0.04151 0.04213 0.04361 1.27% FabArray::ParallelCopy_nowait() 41 0.03602 0.03958 0.04274 1.24% StateDataPhysBCFunct::() 41 0.03929 0.04053 0.04216 1.22% StateData::FillBoundary(geom) 41 0.03916 0.04038 0.042 1.22% Castro::construct_new_source() 50 0.02633 0.03001 0.03345 0.97% Gravity::interpolate_monopole_grav() 21 0.02788 0.02809 0.02869 0.83% Castro::post_init() 1 0.02589 0.02633 0.02659 0.77% Castro::construct_new_gravity_source() 10 0.02049 0.02353 0.02657 0.77% Amr::writePlotFile() 2 0.02254 0.02283 0.02299 0.67% Castro::apply_source_to_state() 20 0.01302 0.01531 0.01939 0.56% MultiFab::Saxpy() 20 0.01296 0.01526 0.0193 0.56% Castro::post_timestep() 10 0.01561 0.01602 0.01637 0.48% VisMF::Write(FabArray) 2 0.01178 0.01222 0.01446 0.42% Castro::Castro() 1 0.008315 0.01025 0.01203 0.35% Castro::check_for_nan() 20 0.01039 0.01106 0.01189 0.35% MultiFab::contains_nan() 20 0.01036 0.01104 0.01187 0.34% Castro::construct_old_source() 50 0.00729 0.01066 0.01145 0.33% Castro::construct_old_gravity_source() 10 0.007218 0.01058 0.01139 0.33% FabArray::setDomainBndry() 41 0.006739 0.009109 0.01074 0.31% Castro::computeNewDt() 9 0.006793 0.007847 0.008659 0.25% Castro::initMFs() 1 0.005247 0.00664 0.007853 0.23% Castro::enforce_min_density() 62 0.006536 0.006877 0.007496 0.22% AmrLevel::AmrLevel(dm) 1 0.004326 0.005394 0.006335 0.18% StateData::define() 4 0.004296 0.005368 0.006303 0.18% Castro::swap_state_time_levels() 10 0.002513 0.003545 0.004197 0.12% Castro::buildMetrics() 1 0.001338 0.001724 0.002066 0.06% Castro::post_regrid() 1 0.001555 0.001713 0.002007 0.06% Castro::finalize_do_advance() 10 0.0004727 0.0009651 0.001215 0.04% Amr::InitAmr() 1 0.0002819 0.0004019 0.0006342 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.722e-05 0.0002865 0.0004267 0.01% DistributionMapping::LeastUsedCPUs() 1 1.083e-05 0.0002803 0.0004195 0.01% Castro::enforce_consistent_e() 1 7.916e-05 0.0001111 0.0001586 0.00% FabArrayBase::getCPC() 41 6.989e-05 8.016e-05 0.0001041 0.00% Castro::finalize_advance() 10 6.119e-05 6.526e-05 6.805e-05 0.00% Amr::writeSmallPlotFile() 1 3.594e-05 5.747e-05 6.476e-05 0.00% Castro::enforce_speed_limit() 62 2.734e-05 2.979e-05 3.387e-05 0.00% FabArrayBase::CPC::define() 2 2.181e-05 2.529e-05 3.101e-05 0.00% Gravity::swapTimeLevels() 10 1.224e-05 1.442e-05 1.833e-05 0.00% Amr::initSubcycle() 1 8.465e-06 1.28e-05 1.742e-05 0.00% Gravity::set_mass_offset() 10 8.529e-06 1.106e-05 1.284e-05 0.00% Castro::create_source_corrector() 10 8.532e-06 1.061e-05 1.242e-05 0.00% Castro::FluxRegCrseInit 10 8.122e-06 9.601e-06 1.14e-05 0.00% Castro::retry_advance_ctu() 10 4.447e-06 5.745e-06 7.138e-06 0.00% Castro::FluxRegFineAdd() 10 2.026e-06 2.504e-06 3.565e-06 0.00% DistributionMapping::Distribute() 1 1.037e-06 1.283e-06 1.651e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.04-39-g50466d11e7b2) finalized