MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-4-gef52970b80e3) initialized Starting run at 22:46:25 UTC on 2022-05-04. Successfully read inputs file ... Castro git describe: 22.05-29-g205b0cbd5 AMReX git describe: 22.05-4-gef52970b8 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013224958 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.34792334 [STEP 1] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.344630775 [STEP 2] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.32415343 [STEP 3] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.324730242 [STEP 4] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.326491966 [STEP 5] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.354099624 [STEP 6] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.310439034 [STEP 7] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.304021768 [STEP 8] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.305254299 [STEP 9] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.303974297 [STEP 10] FAB kilobyte spread across MPI nodes: [57854 ... 57854] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009502983 seconds Ending run at 22:46:28 UTC on 2022-05-04. Run time = 3.436806637 Run time without initialization = 3.259162408 Average number of zones advanced per microsecond: 0.804 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.436 ... 3.437 ... 3.437 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2411 2.2891 2.3416 68.13% Gravity::make_radial_gravity() 21 0.3282 0.3419 0.3502 10.19% Castro::do_advance_ctu() 10 0.04083 0.09342 0.1464 4.26% Castro::initData() 1 0.04 0.08181 0.1171 3.41% Castro::estTimeStep() 21 0.02399 0.05822 0.09799 2.85% FabArray::setVal() 143 0.06777 0.07357 0.07809 2.27% Castro::reset_internal_energy(Fab) 1008 0.04853 0.05027 0.05248 1.53% FabArray::ParallelCopy_finish() 41 0.03221 0.03933 0.04964 1.44% StateData::FillBoundary(geom) 41 0.03982 0.04205 0.04667 1.36% FabArray::ParallelCopy_nowait() 41 0.04121 0.04221 0.0432 1.26% Castro::normalize_species() 62 0.04128 0.04211 0.04277 1.24% FillPatchIterator::Initialize 41 0.02554 0.03269 0.03581 1.04% Gravity::interpolate_monopole_grav() 21 0.02767 0.02798 0.02861 0.83% Castro::construct_new_gravity_source() 10 0.02265 0.02485 0.02663 0.77% Castro::expand_state() 10 0.01335 0.01816 0.02126 0.62% Castro::computeTemp() 63 0.01834 0.01891 0.01954 0.57% Castro::initialize_do_advance() 10 0.01196 0.01661 0.018 0.52% MultiFab::Saxpy() 20 0.01442 0.01578 0.01708 0.50% Castro::initialize_advance() 10 0.0106 0.01264 0.0149 0.43% VisMF::Write(FabArray) 2 0.01163 0.01221 0.01429 0.42% Gravity::get_new_grav_vector() 11 0.01059 0.0116 0.01352 0.39% Castro::construct_old_gravity_source() 10 0.009351 0.0115 0.01258 0.37% MultiFab::contains_nan() 20 0.01035 0.01125 0.01254 0.36% FabArray::setDomainBndry() 41 0.007494 0.0105 0.01204 0.35% Amr::writePlotFile() 2 0.00866 0.0109 0.01133 0.33% Gravity::get_old_grav_vector() 10 0.008108 0.009431 0.01102 0.32% Castro::enforce_min_density() 62 0.006425 0.006723 0.007053 0.21% Castro::construct_new_source() 50 0.006411 0.006632 0.006839 0.20% Castro::initMFs() 1 0.005506 0.005953 0.006255 0.18% StateData::define() 4 0.004462 0.004807 0.005016 0.15% main() 1 0.003524 0.003862 0.00411 0.12% Castro::swap_state_time_levels() 10 0.003024 0.003906 0.004081 0.12% Amr::coarseTimeStep() 10 0.0004445 0.0007501 0.001467 0.04% Castro::buildMetrics() 1 0.00126 0.001359 0.001429 0.04% Castro::finalize_do_advance() 10 0.0008678 0.001128 0.001334 0.04% Amr::timeStep() 10 0.0001697 0.0002288 0.0004849 0.01% Amr::InitAmr() 1 0.0002619 0.000303 0.000403 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002797 0.0002929 0.0003163 0.01% StateDataPhysBCFunct::() 41 0.0001434 0.0001626 0.000193 0.01% Castro::clean_state() 62 0.0001427 0.0001674 0.0001862 0.01% DistributionMapping::LeastUsedCPUs() 1 1.056e-05 0.0001192 0.0001692 0.00% Castro::construct_old_source() 50 7.188e-05 8.077e-05 0.0001037 0.00% Castro::enforce_consistent_e() 1 8.446e-05 9.032e-05 0.0001023 0.00% Castro::Castro() 1 5.702e-05 7.024e-05 9.058e-05 0.00% Castro::subcycle_advance_ctu() 10 5.094e-05 7.037e-05 8.724e-05 0.00% FillPatchSingleLevel 41 5.792e-05 7.024e-05 8.521e-05 0.00% Castro::do_new_sources() 10 5.968e-05 6.811e-05 8.034e-05 0.00% Castro::do_old_sources() 10 5.723e-05 6.712e-05 7.848e-05 0.00% FabArrayBase::getCPC() 41 4.716e-05 5.902e-05 7.545e-05 0.00% Amr::writeSmallPlotFile() 1 5.949e-05 6.452e-05 7.465e-05 0.00% FabArray::ParallelCopy() 41 5.991e-05 6.619e-05 7.439e-05 0.00% Castro::construct_old_gravity() 10 4.796e-05 5.692e-05 7.292e-05 0.00% Amr::FinalizeInit() 1 3.806e-06 1.217e-05 6.54e-05 0.00% Castro::apply_source_to_state() 20 3.936e-05 4.904e-05 6.088e-05 0.00% Castro::construct_new_gravity() 10 3.662e-05 4.65e-05 5.821e-05 0.00% Castro::advance() 10 3.55e-05 4.405e-05 5.704e-05 0.00% Castro::finalize_advance() 10 4.585e-05 5.081e-05 5.574e-05 0.00% Castro::enforce_speed_limit() 62 2.448e-05 3.013e-05 3.408e-05 0.00% FabArrayBase::CPC::define() 2 2.17e-05 2.678e-05 3.226e-05 0.00% Castro::check_for_nan() 20 2.301e-05 2.43e-05 2.788e-05 0.00% Amr::defBaseLevel() 1 2.299e-05 2.499e-05 2.716e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.242e-05 1.568e-05 1.842e-05 0.00% Gravity::swapTimeLevels() 10 1.203e-05 1.475e-05 1.662e-05 0.00% Gravity::set_mass_offset() 10 9.359e-06 1.063e-05 1.305e-05 0.00% Castro::post_init() 1 8.432e-06 9.789e-06 1.184e-05 0.00% Castro::create_source_corrector() 10 8.648e-06 1.073e-05 1.167e-05 0.00% Castro::post_timestep() 10 9.032e-06 1.008e-05 1.166e-05 0.00% Castro::FluxRegCrseInit 10 9.097e-06 1.032e-05 1.158e-05 0.00% Amr::initSubcycle() 1 8.447e-06 9.307e-06 9.84e-06 0.00% Castro::computeNewDt() 9 7.432e-06 8.371e-06 9.266e-06 0.00% Castro::retry_advance_ctu() 10 4.743e-06 5.608e-06 6.726e-06 0.00% Amr::InitializeInit() 1 2.102e-06 2.834e-06 6.065e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.025e-06 4.456e-06 5.43e-06 0.00% Castro::computeInitialDt() 2 2.974e-06 4.1e-06 5.046e-06 0.00% Castro::post_regrid() 1 1.834e-06 3.272e-06 4.4e-06 0.00% Amr::init() 1 1.7e-06 2.405e-06 3.394e-06 0.00% Castro::FluxRegFineAdd() 10 2.23e-06 2.65e-06 3.134e-06 0.00% Amr::initialInit() 1 1.29e-06 1.633e-06 2.246e-06 0.00% DistributionMapping::Distribute() 1 1.152e-06 1.219e-06 1.289e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.436 3.437 3.437 100.00% Amr::coarseTimeStep() 10 3.246 3.246 3.246 94.44% Amr::timeStep() 10 3.236 3.237 3.237 94.18% Castro::advance() 10 3.22 3.221 3.221 93.71% Castro::subcycle_advance_ctu() 10 3.141 3.143 3.145 91.51% Castro::do_advance_ctu() 10 3.141 3.143 3.145 91.51% Castro::construct_ctu_hydro_source() 10 2.241 2.289 2.342 68.13% Gravity::make_radial_gravity() 21 0.3282 0.3419 0.3502 10.19% Gravity::get_new_grav_vector() 11 0.222 0.2237 0.2249 6.55% Castro::construct_old_gravity() 10 0.1944 0.2049 0.2111 6.14% Gravity::get_old_grav_vector() 10 0.1935 0.2041 0.2102 6.12% Castro::construct_new_gravity() 10 0.1985 0.1998 0.2008 5.84% Amr::init() 1 0.1771 0.1772 0.1772 5.16% FillPatchIterator::Initialize 41 0.1608 0.1672 0.174 5.06% Castro::initialize_do_advance() 10 0.1474 0.1569 0.1651 4.80% Amr::initialInit() 1 0.1636 0.1637 0.1638 4.77% Amr::InitializeInit() 1 0.05788 0.1007 0.1364 3.97% Amr::defBaseLevel() 1 0.05787 0.1007 0.1364 3.97% FillPatchSingleLevel 41 0.1163 0.124 0.1316 3.83% Castro::initData() 1 0.04424 0.08589 0.1209 3.52% Castro::clean_state() 62 0.1147 0.1175 0.1198 3.49% Castro::expand_state() 10 0.1012 0.1093 0.1172 3.41% Amr::FinalizeInit() 1 0.02717 0.06296 0.1058 3.08% Castro::estTimeStep() 21 0.02399 0.05822 0.09799 2.85% FabArray::ParallelCopy() 41 0.07543 0.08169 0.09101 2.65% Castro::computeInitialDt() 2 0.001616 0.03731 0.08005 2.33% Castro::initialize_advance() 10 0.07516 0.07707 0.07992 2.33% FabArray::setVal() 143 0.06777 0.07357 0.07809 2.27% Castro::computeTemp() 63 0.06719 0.06947 0.07215 2.10% Castro::do_new_sources() 10 0.06129 0.06558 0.06974 2.03% Castro::reset_internal_energy(MultiFab) 63 0.04881 0.05056 0.05279 1.54% Castro::reset_internal_energy(Fab) 1008 0.04853 0.05027 0.05248 1.53% FabArray::ParallelCopy_finish() 41 0.03221 0.03933 0.04964 1.44% Castro::do_old_sources() 10 0.04696 0.04849 0.04958 1.44% StateDataPhysBCFunct::() 41 0.03997 0.04221 0.04681 1.36% StateData::FillBoundary(geom) 41 0.03982 0.04205 0.04667 1.36% FabArray::ParallelCopy_nowait() 41 0.0413 0.04229 0.04328 1.26% Castro::normalize_species() 62 0.04128 0.04211 0.04277 1.24% Castro::construct_new_source() 50 0.02906 0.03148 0.03345 0.97% Gravity::interpolate_monopole_grav() 21 0.02767 0.02798 0.02861 0.83% Castro::construct_new_gravity_source() 10 0.02265 0.02485 0.02663 0.77% Castro::post_init() 1 0.02481 0.02497 0.02513 0.73% Amr::writePlotFile() 2 0.02295 0.0231 0.02326 0.68% Castro::apply_source_to_state() 20 0.01447 0.01583 0.01713 0.50% MultiFab::Saxpy() 20 0.01442 0.01578 0.01708 0.50% Castro::post_timestep() 10 0.01547 0.01579 0.01611 0.47% VisMF::Write(FabArray) 2 0.01163 0.01221 0.01429 0.42% Castro::construct_old_source() 50 0.009426 0.01158 0.01269 0.37% Castro::construct_old_gravity_source() 10 0.009351 0.0115 0.01258 0.37% Castro::check_for_nan() 20 0.01038 0.01127 0.01256 0.37% MultiFab::contains_nan() 20 0.01035 0.01125 0.01254 0.36% FabArray::setDomainBndry() 41 0.007494 0.0105 0.01204 0.35% Castro::Castro() 1 0.008793 0.009858 0.01044 0.30% Castro::computeNewDt() 9 0.006776 0.007376 0.00821 0.24% Castro::enforce_min_density() 62 0.006425 0.006723 0.007053 0.21% Castro::initMFs() 1 0.005506 0.005953 0.006255 0.18% AmrLevel::AmrLevel(dm) 1 0.00448 0.004823 0.005034 0.15% StateData::define() 4 0.004462 0.004807 0.005016 0.15% Castro::swap_state_time_levels() 10 0.003024 0.003906 0.004081 0.12% Castro::post_regrid() 1 0.001526 0.0016 0.001671 0.05% Castro::buildMetrics() 1 0.001372 0.001496 0.001582 0.05% Castro::finalize_do_advance() 10 0.0008678 0.001128 0.001334 0.04% Amr::InitAmr() 1 0.0002709 0.0003123 0.0004114 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.624e-05 0.0001249 0.0001759 0.01% DistributionMapping::LeastUsedCPUs() 1 1.056e-05 0.0001192 0.0001692 0.00% FabArrayBase::getCPC() 41 7.106e-05 8.579e-05 0.0001076 0.00% Castro::enforce_consistent_e() 1 8.446e-05 9.032e-05 0.0001023 0.00% Amr::writeSmallPlotFile() 1 5.949e-05 6.452e-05 7.465e-05 0.00% Castro::finalize_advance() 10 5.967e-05 6.379e-05 6.881e-05 0.00% Castro::enforce_speed_limit() 62 2.448e-05 3.013e-05 3.408e-05 0.00% FabArrayBase::CPC::define() 2 2.17e-05 2.678e-05 3.226e-05 0.00% Gravity::swapTimeLevels() 10 1.203e-05 1.475e-05 1.662e-05 0.00% Gravity::set_mass_offset() 10 9.359e-06 1.063e-05 1.305e-05 0.00% Castro::create_source_corrector() 10 8.648e-06 1.073e-05 1.167e-05 0.00% Castro::FluxRegCrseInit 10 9.097e-06 1.032e-05 1.158e-05 0.00% Amr::initSubcycle() 1 8.447e-06 9.307e-06 9.84e-06 0.00% Castro::retry_advance_ctu() 10 4.743e-06 5.608e-06 6.726e-06 0.00% Castro::FluxRegFineAdd() 10 2.23e-06 2.65e-06 3.134e-06 0.00% DistributionMapping::Distribute() 1 1.152e-06 1.219e-06 1.289e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-4-gef52970b80e3) finalized