MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-3-gdf9b6944a6d5) initialized Starting run at 05:37:32 UTC on 2022-05-04. Successfully read inputs file ... Castro git describe: 22.05-8-gf5a7de0a1 AMReX git describe: 22.05-3-gdf9b6944a Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013683016 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.351445116 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.363702864 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.321901165 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.321562815 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.322072248 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348739069 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.306006465 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.299438585 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.297833923 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.299499387 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009282941 seconds Ending run at 05:37:36 UTC on 2022-05-04. Run time = 3.42281387 Run time without initialization = 3.245400193 Average number of zones advanced per microsecond: 0.808 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.422 ... 3.423 ... 3.423 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2055 2.2614 2.2951 67.05% Gravity::make_radial_gravity() 21 0.3321 0.3439 0.3569 10.43% Castro::do_advance_ctu() 10 0.06634 0.1008 0.1609 4.70% Castro::initData() 1 0.03852 0.0789 0.1151 3.36% Castro::estTimeStep() 21 0.01907 0.05818 0.1037 3.03% FabArray::setVal() 143 0.07084 0.07454 0.07708 2.25% Castro::reset_internal_energy(Fab) 1008 0.04791 0.05033 0.0558 1.63% FabArray::ParallelCopy_finish() 41 0.04189 0.04545 0.05385 1.57% StateData::FillBoundary(geom) 41 0.03832 0.04185 0.04572 1.34% FabArray::ParallelCopy_nowait() 41 0.04101 0.04224 0.04371 1.28% Castro::normalize_species() 62 0.041 0.04169 0.04249 1.24% FillPatchIterator::Initialize 41 0.02458 0.03197 0.03534 1.03% Gravity::interpolate_monopole_grav() 21 0.02754 0.02786 0.02842 0.83% Castro::construct_new_gravity_source() 10 0.02271 0.02472 0.02677 0.78% Castro::expand_state() 10 0.01478 0.01993 0.02205 0.64% Castro::computeTemp() 63 0.01813 0.01877 0.0196 0.57% Castro::initialize_do_advance() 10 0.01636 0.01775 0.01854 0.54% MultiFab::Saxpy() 20 0.01482 0.01585 0.01771 0.52% Castro::initialize_advance() 10 0.01053 0.01246 0.01451 0.42% VisMF::Write(FabArray) 2 0.01131 0.01191 0.01429 0.42% Gravity::get_new_grav_vector() 11 0.01034 0.01146 0.01348 0.39% Castro::construct_old_gravity_source() 10 0.01107 0.01168 0.01293 0.38% MultiFab::contains_nan() 20 0.01022 0.01129 0.01239 0.36% Amr::writePlotFile() 2 0.008927 0.01103 0.01171 0.34% FabArray::setDomainBndry() 41 0.007895 0.0104 0.01158 0.34% Gravity::get_old_grav_vector() 10 0.00839 0.009418 0.01058 0.31% Castro::initMFs() 1 0.00538 0.005757 0.007581 0.22% Castro::construct_new_source() 50 0.006387 0.006703 0.007008 0.20% Castro::enforce_min_density() 62 0.006067 0.006417 0.006696 0.20% StateData::define() 4 0.004442 0.004694 0.005219 0.15% Castro::swap_state_time_levels() 10 0.002963 0.00388 0.004295 0.13% main() 1 0.003758 0.003968 0.004148 0.12% Castro::buildMetrics() 1 0.001275 0.001337 0.001493 0.04% Castro::finalize_do_advance() 10 0.001041 0.001213 0.001332 0.04% Amr::coarseTimeStep() 10 0.0003917 0.0005426 0.0009349 0.03% Amr::timeStep() 10 0.0001741 0.0002273 0.0004305 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002851 0.0003074 0.000392 0.01% Amr::InitAmr() 1 0.0002821 0.0003089 0.0003821 0.01% Castro::do_old_sources() 10 5.267e-05 9.301e-05 0.0003098 0.01% Castro::clean_state() 62 0.0001433 0.0001571 0.0001717 0.01% StateDataPhysBCFunct::() 41 0.0001152 0.0001323 0.0001459 0.00% Castro::construct_old_source() 50 5.319e-05 8.035e-05 0.0001263 0.00% Castro::enforce_consistent_e() 1 7.533e-05 8.986e-05 0.000117 0.00% DistributionMapping::LeastUsedCPUs() 1 7.664e-06 7.93e-05 0.0001032 0.00% Castro::Castro() 1 5.193e-05 6.827e-05 8.427e-05 0.00% FillPatchSingleLevel 41 5.211e-05 6.357e-05 7.523e-05 0.00% FabArray::ParallelCopy() 41 5.369e-05 6.099e-05 7.311e-05 0.00% Amr::FinalizeInit() 1 3.869e-06 1.351e-05 7.287e-05 0.00% Castro::subcycle_advance_ctu() 10 4.067e-05 5.14e-05 7.237e-05 0.00% Castro::do_new_sources() 10 5.375e-05 6.321e-05 7.067e-05 0.00% Amr::writeSmallPlotFile() 1 2.411e-05 5.025e-05 6.7e-05 0.00% Castro::apply_source_to_state() 20 3.706e-05 4.779e-05 6.04e-05 0.00% FabArrayBase::getCPC() 41 4.155e-05 5.157e-05 6.017e-05 0.00% Castro::construct_old_gravity() 10 3.83e-05 4.744e-05 5.476e-05 0.00% Castro::finalize_advance() 10 4.845e-05 5.082e-05 5.363e-05 0.00% Castro::construct_new_gravity() 10 3.834e-05 4.212e-05 4.703e-05 0.00% Castro::advance() 10 3.422e-05 3.868e-05 4.359e-05 0.00% FabArrayBase::CPC::define() 2 2.238e-05 2.739e-05 3.423e-05 0.00% Castro::enforce_speed_limit() 62 2.548e-05 2.748e-05 3.031e-05 0.00% Amr::defBaseLevel() 1 2.342e-05 2.592e-05 2.993e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.248e-05 2.281e-05 2.842e-05 0.00% Castro::check_for_nan() 20 2.002e-05 2.246e-05 2.644e-05 0.00% Castro::computeNewDt() 9 7.164e-06 1.005e-05 2.338e-05 0.00% Gravity::swapTimeLevels() 10 1.169e-05 1.494e-05 2.13e-05 0.00% Castro::post_init() 1 8.067e-06 9.908e-06 1.311e-05 0.00% Castro::post_timestep() 10 8.774e-06 1.003e-05 1.184e-05 0.00% Castro::FluxRegCrseInit 10 7.936e-06 9.226e-06 1.157e-05 0.00% Castro::create_source_corrector() 10 8.162e-06 1.002e-05 1.116e-05 0.00% Gravity::set_mass_offset() 10 7.799e-06 9.562e-06 1.04e-05 0.00% Amr::initSubcycle() 1 8.161e-06 9.119e-06 1.017e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.718e-06 4.723e-06 6.5e-06 0.00% Castro::retry_advance_ctu() 10 4.401e-06 5.486e-06 6.283e-06 0.00% Amr::InitializeInit() 1 2.208e-06 2.897e-06 6.21e-06 0.00% Castro::computeInitialDt() 2 3.891e-06 4.427e-06 5.571e-06 0.00% Castro::post_regrid() 1 1.885e-06 3.483e-06 4.953e-06 0.00% Castro::FluxRegFineAdd() 10 2.145e-06 2.501e-06 2.855e-06 0.00% Amr::init() 1 1.917e-06 2.252e-06 2.822e-06 0.00% Amr::initialInit() 1 1.333e-06 1.788e-06 2.257e-06 0.00% DistributionMapping::Distribute() 1 9.84e-07 1.145e-06 1.385e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.422 3.423 3.423 100.00% Amr::coarseTimeStep() 10 3.232 3.232 3.232 94.43% Amr::timeStep() 10 3.222 3.223 3.223 94.17% Castro::advance() 10 3.207 3.207 3.207 93.70% Castro::subcycle_advance_ctu() 10 3.127 3.131 3.133 91.52% Castro::do_advance_ctu() 10 3.127 3.13 3.133 91.52% Castro::construct_ctu_hydro_source() 10 2.206 2.261 2.295 67.05% Gravity::make_radial_gravity() 21 0.3321 0.3439 0.3569 10.43% Gravity::get_new_grav_vector() 11 0.2236 0.2249 0.2261 6.61% Castro::construct_old_gravity() 10 0.1982 0.2072 0.2182 6.37% Gravity::get_old_grav_vector() 10 0.1973 0.2064 0.2174 6.35% Castro::construct_new_gravity() 10 0.1977 0.1985 0.199 5.81% FillPatchIterator::Initialize 41 0.1586 0.1723 0.1789 5.23% Amr::init() 1 0.1769 0.1769 0.177 5.17% Castro::initialize_do_advance() 10 0.1484 0.1582 0.164 4.79% Amr::initialInit() 1 0.163 0.1634 0.1636 4.78% FillPatchSingleLevel 41 0.1256 0.1299 0.1341 3.92% Amr::InitializeInit() 1 0.05715 0.09745 0.1335 3.90% Amr::defBaseLevel() 1 0.05715 0.09744 0.1335 3.90% Castro::clean_state() 62 0.1133 0.1168 0.1231 3.60% Castro::initData() 1 0.04212 0.08289 0.1194 3.49% Castro::expand_state() 10 0.09939 0.1094 0.115 3.36% Amr::FinalizeInit() 1 0.02995 0.06591 0.1061 3.10% Castro::estTimeStep() 21 0.01907 0.05818 0.1037 3.03% FabArray::ParallelCopy() 41 0.08465 0.08784 0.09544 2.79% Castro::initialize_advance() 10 0.07433 0.07652 0.07976 2.33% Castro::computeInitialDt() 2 0.001709 0.03778 0.07809 2.28% FabArray::setVal() 143 0.07084 0.07454 0.07708 2.25% Castro::computeTemp() 63 0.06645 0.06941 0.07576 2.21% Castro::do_new_sources() 10 0.06092 0.06516 0.0693 2.02% Castro::reset_internal_energy(MultiFab) 63 0.04821 0.05063 0.05619 1.64% Castro::reset_internal_energy(Fab) 1008 0.04791 0.05033 0.0558 1.63% Castro::do_old_sources() 10 0.04752 0.0499 0.05472 1.60% FabArray::ParallelCopy_finish() 41 0.04189 0.04545 0.05385 1.57% StateDataPhysBCFunct::() 41 0.03844 0.04198 0.04584 1.34% StateData::FillBoundary(geom) 41 0.03832 0.04185 0.04572 1.34% FabArray::ParallelCopy_nowait() 41 0.04109 0.04232 0.04378 1.28% Castro::normalize_species() 62 0.041 0.04169 0.04249 1.24% Castro::construct_new_source() 50 0.02911 0.03142 0.03372 0.99% Gravity::interpolate_monopole_grav() 21 0.02754 0.02786 0.02842 0.83% Castro::post_init() 1 0.02711 0.02743 0.02761 0.81% Castro::construct_new_gravity_source() 10 0.02271 0.02472 0.02677 0.78% Amr::writePlotFile() 2 0.02271 0.02294 0.02322 0.68% Castro::apply_source_to_state() 20 0.01486 0.01589 0.01775 0.52% MultiFab::Saxpy() 20 0.01482 0.01585 0.01771 0.52% Castro::post_timestep() 10 0.01507 0.01576 0.01615 0.47% VisMF::Write(FabArray) 2 0.01131 0.01191 0.01429 0.42% Castro::construct_old_source() 50 0.01113 0.01176 0.01305 0.38% Castro::construct_old_gravity_source() 10 0.01107 0.01168 0.01293 0.38% Castro::check_for_nan() 20 0.01024 0.01131 0.01241 0.36% MultiFab::contains_nan() 20 0.01022 0.01129 0.01239 0.36% FabArray::setDomainBndry() 41 0.007895 0.0104 0.01158 0.34% Castro::Castro() 1 0.009213 0.00973 0.01074 0.31% Castro::computeNewDt() 9 0.006822 0.007433 0.008119 0.24% Castro::initMFs() 1 0.00538 0.005757 0.007581 0.22% Castro::enforce_min_density() 62 0.006067 0.006417 0.006696 0.20% AmrLevel::AmrLevel(dm) 1 0.004464 0.004717 0.005245 0.15% StateData::define() 4 0.004442 0.004694 0.005219 0.15% Castro::swap_state_time_levels() 10 0.002963 0.00388 0.004295 0.13% Castro::post_regrid() 1 0.00154 0.001616 0.001892 0.06% Castro::buildMetrics() 1 0.001388 0.001472 0.001668 0.05% Castro::finalize_do_advance() 10 0.001041 0.001213 0.001332 0.04% Amr::InitAmr() 1 0.0002913 0.000318 0.0003903 0.01% Castro::enforce_consistent_e() 1 7.533e-05 8.986e-05 0.000117 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 1.245e-05 8.517e-05 0.0001109 0.00% DistributionMapping::LeastUsedCPUs() 1 7.664e-06 7.93e-05 0.0001032 0.00% FabArrayBase::getCPC() 41 6.708e-05 7.896e-05 8.723e-05 0.00% Castro::finalize_advance() 10 5.942e-05 6.254e-05 6.734e-05 0.00% Amr::writeSmallPlotFile() 1 2.411e-05 5.025e-05 6.7e-05 0.00% FabArrayBase::CPC::define() 2 2.238e-05 2.739e-05 3.423e-05 0.00% Castro::enforce_speed_limit() 62 2.548e-05 2.748e-05 3.031e-05 0.00% Gravity::swapTimeLevels() 10 1.169e-05 1.494e-05 2.13e-05 0.00% Castro::FluxRegCrseInit 10 7.936e-06 9.226e-06 1.157e-05 0.00% Castro::create_source_corrector() 10 8.162e-06 1.002e-05 1.116e-05 0.00% Gravity::set_mass_offset() 10 7.799e-06 9.562e-06 1.04e-05 0.00% Amr::initSubcycle() 1 8.161e-06 9.119e-06 1.017e-05 0.00% Castro::retry_advance_ctu() 10 4.401e-06 5.486e-06 6.283e-06 0.00% Castro::FluxRegFineAdd() 10 2.145e-06 2.501e-06 2.855e-06 0.00% DistributionMapping::Distribute() 1 9.84e-07 1.145e-06 1.385e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-3-gdf9b6944a6d5) finalized