MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-4-gef52970b80e3) initialized Starting run at 15:11:41 UTC on 2022-05-05. Successfully read inputs file ... Castro git describe: 22.05-36-g9148a57b8 AMReX git describe: 22.05-4-gef52970b8 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013427513 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356967996 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.353645197 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.326175867 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.327302063 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.327147275 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.351645015 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.309927283 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.303175813 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.303698969 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.304767327 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009643661 seconds Ending run at 15:11:45 UTC on 2022-05-05. Run time = 3.46246581 Run time without initialization = 3.278145819 Average number of zones advanced per microsecond: 0.800 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.462 ... 3.462 ... 3.462 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2531 2.2878 2.3493 67.85% Gravity::make_radial_gravity() 21 0.3534 0.3639 0.3767 10.88% Castro::do_advance_ctu() 10 0.03028 0.09515 0.1308 3.78% Castro::initData() 1 0.0381 0.08566 0.1135 3.28% Castro::estTimeStep() 21 0.01792 0.04779 0.1039 3.00% FabArray::setVal() 143 0.06888 0.07486 0.08133 2.35% Castro::reset_internal_energy(Fab) 1008 0.04633 0.0501 0.05209 1.50% FabArray::ParallelCopy_finish() 41 0.03554 0.04449 0.05139 1.48% StateData::FillBoundary(geom) 41 0.0395 0.04223 0.04667 1.35% Castro::normalize_species() 62 0.04198 0.04316 0.04507 1.30% FabArray::ParallelCopy_nowait() 41 0.03909 0.04179 0.04415 1.28% FillPatchIterator::Initialize 41 0.02666 0.03262 0.03535 1.02% Gravity::interpolate_monopole_grav() 21 0.02777 0.02833 0.02988 0.86% Castro::construct_new_gravity_source() 10 0.02307 0.02424 0.02533 0.73% Castro::expand_state() 10 0.01429 0.01909 0.02119 0.61% Castro::computeTemp() 63 0.01684 0.01872 0.0198 0.57% Castro::initialize_do_advance() 10 0.01628 0.01772 0.01864 0.54% MultiFab::Saxpy() 20 0.01506 0.0161 0.0183 0.53% Castro::initialize_advance() 10 0.01068 0.01257 0.01497 0.43% VisMF::Write(FabArray) 2 0.01178 0.01226 0.01449 0.42% Gravity::get_new_grav_vector() 11 0.009719 0.01115 0.01295 0.37% Castro::construct_old_gravity_source() 10 0.01099 0.01179 0.01267 0.37% MultiFab::contains_nan() 20 0.01075 0.01167 0.01259 0.36% Gravity::get_old_grav_vector() 10 0.008687 0.01 0.0123 0.36% FabArray::setDomainBndry() 41 0.00751 0.01029 0.01179 0.34% Amr::writePlotFile() 2 0.0088 0.01087 0.01136 0.33% Castro::initMFs() 1 0.005376 0.006222 0.008702 0.25% Castro::enforce_min_density() 62 0.00649 0.006822 0.007118 0.21% Castro::construct_new_source() 50 0.00636 0.006709 0.006947 0.20% StateData::define() 4 0.004361 0.004898 0.006426 0.19% main() 1 0.003382 0.003819 0.004195 0.12% Castro::swap_state_time_levels() 10 0.002988 0.00386 0.004016 0.12% Castro::buildMetrics() 1 0.001241 0.001397 0.001856 0.05% Castro::finalize_do_advance() 10 0.0008991 0.001142 0.001251 0.04% Amr::coarseTimeStep() 10 0.0003362 0.0005254 0.0009411 0.03% Amr::timeStep() 10 0.0001778 0.0002328 0.0004413 0.01% Amr::InitAmr() 1 0.0002778 0.0003374 0.0004397 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002881 0.0002944 0.0003 0.01% DistributionMapping::LeastUsedCPUs() 1 7.937e-06 0.000132 0.0002079 0.01% Castro::clean_state() 62 0.0001404 0.0001575 0.0001739 0.01% Castro::enforce_consistent_e() 1 8.129e-05 0.0001115 0.0001665 0.00% StateDataPhysBCFunct::() 41 0.0001207 0.0001412 0.0001655 0.00% FabArray::ParallelCopy() 41 5.241e-05 6.066e-05 8.173e-05 0.00% Amr::FinalizeInit() 1 3.411e-06 1.484e-05 8.018e-05 0.00% Castro::construct_old_source() 50 5.014e-05 6.405e-05 7.656e-05 0.00% FillPatchSingleLevel 41 5.725e-05 6.817e-05 7.641e-05 0.00% Castro::do_new_sources() 10 5.092e-05 6.071e-05 7.359e-05 0.00% Castro::construct_old_gravity() 10 4.519e-05 5.268e-05 7.169e-05 0.00% Castro::Castro() 1 5.235e-05 6.145e-05 7.042e-05 0.00% Castro::subcycle_advance_ctu() 10 4.28e-05 5.658e-05 6.977e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.135e-05 6.833e-05 0.00% Castro::do_old_sources() 10 5.032e-05 5.844e-05 6.56e-05 0.00% Castro::apply_source_to_state() 20 4.01e-05 4.672e-05 6.111e-05 0.00% Castro::advance() 10 3.399e-05 4.318e-05 5.997e-05 0.00% FabArrayBase::getCPC() 41 4.18e-05 4.981e-05 5.729e-05 0.00% Castro::finalize_advance() 10 4.9e-05 5.142e-05 5.329e-05 0.00% Castro::construct_new_gravity() 10 3.753e-05 4.253e-05 5.147e-05 0.00% Amr::defBaseLevel() 1 3.166e-05 4.112e-05 5.09e-05 0.00% Castro::enforce_speed_limit() 62 2.42e-05 2.757e-05 3.202e-05 0.00% FabArrayBase::CPC::define() 2 2.219e-05 2.576e-05 3.149e-05 0.00% Castro::check_for_nan() 20 1.998e-05 2.234e-05 2.872e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.615e-05 2.053e-05 2.691e-05 0.00% Gravity::swapTimeLevels() 10 1.001e-05 1.421e-05 1.873e-05 0.00% Amr::initSubcycle() 1 7.972e-06 1.001e-05 1.465e-05 0.00% Castro::create_source_corrector() 10 9.347e-06 1.096e-05 1.43e-05 0.00% Gravity::set_mass_offset() 10 8.687e-06 1.004e-05 1.314e-05 0.00% Castro::post_timestep() 10 9.135e-06 1.057e-05 1.29e-05 0.00% Castro::computeNewDt() 9 7.37e-06 8.971e-06 1.117e-05 0.00% Castro::FluxRegCrseInit 10 8.504e-06 9.634e-06 1.112e-05 0.00% Castro::post_init() 1 3.185e-06 5.369e-06 9.902e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.022e-06 4.986e-06 7.221e-06 0.00% Amr::InitializeInit() 1 2.202e-06 3.222e-06 6.955e-06 0.00% Castro::post_regrid() 1 1.896e-06 3.547e-06 6.521e-06 0.00% Amr::init() 1 2.002e-06 2.788e-06 6.387e-06 0.00% Castro::retry_advance_ctu() 10 4.297e-06 5.337e-06 6.374e-06 0.00% Castro::computeInitialDt() 2 3.192e-06 4.613e-06 5.355e-06 0.00% Castro::FluxRegFineAdd() 10 2.144e-06 2.638e-06 3.169e-06 0.00% Amr::initialInit() 1 1.155e-06 1.688e-06 2.382e-06 0.00% DistributionMapping::Distribute() 1 1.05e-06 1.24e-06 1.451e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.462 3.462 3.462 100.00% Amr::coarseTimeStep() 10 3.264 3.264 3.264 94.28% Amr::timeStep() 10 3.255 3.256 3.256 94.04% Castro::advance() 10 3.239 3.24 3.24 93.57% Castro::subcycle_advance_ctu() 10 3.159 3.163 3.166 91.42% Castro::do_advance_ctu() 10 3.159 3.163 3.165 91.42% Castro::construct_ctu_hydro_source() 10 2.253 2.288 2.349 67.85% Gravity::make_radial_gravity() 21 0.3534 0.3639 0.3767 10.88% Gravity::get_new_grav_vector() 11 0.2353 0.2368 0.2383 6.88% Castro::construct_old_gravity() 10 0.2085 0.2165 0.2294 6.62% Gravity::get_old_grav_vector() 10 0.2076 0.2156 0.2286 6.60% Castro::construct_new_gravity() 10 0.2002 0.2016 0.2027 5.86% FillPatchIterator::Initialize 41 0.1587 0.1718 0.185 5.34% Amr::init() 1 0.1837 0.1838 0.1839 5.31% Amr::initialInit() 1 0.1701 0.1704 0.1706 4.93% Castro::initialize_do_advance() 10 0.1481 0.1589 0.1662 4.80% FillPatchSingleLevel 41 0.1202 0.1289 0.1387 4.00% Amr::InitializeInit() 1 0.05587 0.1053 0.1315 3.80% Amr::defBaseLevel() 1 0.05587 0.1053 0.1315 3.80% Castro::clean_state() 62 0.1117 0.1182 0.123 3.55% Castro::initData() 1 0.04198 0.0902 0.1176 3.40% Castro::expand_state() 10 0.09856 0.1099 0.1171 3.38% Amr::FinalizeInit() 1 0.03909 0.06507 0.1146 3.31% Castro::estTimeStep() 21 0.01792 0.04779 0.1039 3.00% FabArray::ParallelCopy() 41 0.07844 0.08641 0.09388 2.71% FabArray::setVal() 143 0.06888 0.07486 0.08133 2.35% Castro::initialize_advance() 10 0.074 0.07676 0.0801 2.31% Castro::computeInitialDt() 2 0.001686 0.02781 0.07734 2.23% Castro::computeTemp() 63 0.06346 0.06911 0.07172 2.07% Castro::do_new_sources() 10 0.06049 0.06497 0.06869 1.98% Castro::do_old_sources() 10 0.04554 0.05066 0.05546 1.60% Castro::reset_internal_energy(MultiFab) 63 0.04662 0.05039 0.05239 1.51% Castro::reset_internal_energy(Fab) 1008 0.04633 0.0501 0.05209 1.50% FabArray::ParallelCopy_finish() 41 0.03554 0.04449 0.05139 1.48% StateDataPhysBCFunct::() 41 0.03966 0.04237 0.0468 1.35% StateData::FillBoundary(geom) 41 0.0395 0.04223 0.04667 1.35% Castro::normalize_species() 62 0.04198 0.04316 0.04507 1.30% FabArray::ParallelCopy_nowait() 41 0.03916 0.04186 0.04422 1.28% Castro::post_init() 1 0.03512 0.03623 0.03671 1.06% Castro::construct_new_source() 50 0.02956 0.03094 0.03214 0.93% Gravity::interpolate_monopole_grav() 21 0.02777 0.02833 0.02988 0.86% Castro::construct_new_gravity_source() 10 0.02307 0.02424 0.02533 0.73% Amr::writePlotFile() 2 0.02283 0.02312 0.02332 0.67% Castro::apply_source_to_state() 20 0.01511 0.01615 0.01836 0.53% MultiFab::Saxpy() 20 0.01506 0.0161 0.0183 0.53% Castro::post_timestep() 10 0.01489 0.01567 0.01624 0.47% VisMF::Write(FabArray) 2 0.01178 0.01226 0.01449 0.42% Castro::construct_old_source() 50 0.01106 0.01185 0.01273 0.37% Castro::construct_old_gravity_source() 10 0.01099 0.01179 0.01267 0.37% Castro::check_for_nan() 20 0.01078 0.01169 0.01261 0.36% MultiFab::contains_nan() 20 0.01075 0.01167 0.01259 0.36% Castro::Castro() 1 0.009203 0.01003 0.01241 0.36% FabArray::setDomainBndry() 41 0.00751 0.01029 0.01179 0.34% Castro::initMFs() 1 0.005376 0.006222 0.008702 0.25% Castro::computeNewDt() 9 0.006801 0.007466 0.008252 0.24% Castro::enforce_min_density() 62 0.00649 0.006822 0.007118 0.21% AmrLevel::AmrLevel(dm) 1 0.004383 0.004919 0.006444 0.19% StateData::define() 4 0.004361 0.004898 0.006426 0.19% Castro::swap_state_time_levels() 10 0.002988 0.00386 0.004016 0.12% Castro::post_regrid() 1 0.001531 0.001931 0.002943 0.08% Castro::buildMetrics() 1 0.001368 0.001547 0.002085 0.06% Castro::finalize_do_advance() 10 0.0008991 0.001142 0.001251 0.04% Amr::InitAmr() 1 0.0002869 0.0003474 0.0004543 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.38e-05 0.0001382 0.0002164 0.01% DistributionMapping::LeastUsedCPUs() 1 7.937e-06 0.000132 0.0002079 0.01% Castro::enforce_consistent_e() 1 8.129e-05 0.0001115 0.0001665 0.00% FabArrayBase::getCPC() 41 6.645e-05 7.557e-05 8.319e-05 0.00% Amr::writeSmallPlotFile() 1 2.504e-05 5.135e-05 6.833e-05 0.00% Castro::finalize_advance() 10 6.189e-05 6.369e-05 6.668e-05 0.00% Castro::enforce_speed_limit() 62 2.42e-05 2.757e-05 3.202e-05 0.00% FabArrayBase::CPC::define() 2 2.219e-05 2.576e-05 3.149e-05 0.00% Gravity::swapTimeLevels() 10 1.001e-05 1.421e-05 1.873e-05 0.00% Amr::initSubcycle() 1 7.972e-06 1.001e-05 1.465e-05 0.00% Castro::create_source_corrector() 10 9.347e-06 1.096e-05 1.43e-05 0.00% Gravity::set_mass_offset() 10 8.687e-06 1.004e-05 1.314e-05 0.00% Castro::FluxRegCrseInit 10 8.504e-06 9.634e-06 1.112e-05 0.00% Castro::retry_advance_ctu() 10 4.297e-06 5.337e-06 6.374e-06 0.00% Castro::FluxRegFineAdd() 10 2.144e-06 2.638e-06 3.169e-06 0.00% DistributionMapping::Distribute() 1 1.05e-06 1.24e-06 1.451e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-4-gef52970b80e3) finalized