MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-4-gef52970b80e3) initialized Starting run at 05:37:36 UTC on 2022-05-05. Successfully read inputs file ... Castro git describe: 22.05-9-gf85dde19e AMReX git describe: 22.05-4-gef52970b8 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013607681 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.350320954 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.330767471 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.323915024 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.324554057 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.322016471 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.348007893 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.307361696 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.298112234 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.299553446 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.298359151 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009452754 seconds Ending run at 05:37:40 UTC on 2022-05-05. Run time = 3.402490043 Run time without initialization = 3.216536897 Average number of zones advanced per microsecond: 0.815 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.402 ... 3.402 ... 3.403 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1876 2.2592 2.2851 67.16% Gravity::make_radial_gravity() 21 0.3342 0.3439 0.3533 10.38% Castro::do_advance_ctu() 10 0.05805 0.08341 0.1574 4.62% Castro::initData() 1 0.0383 0.08 0.123 3.61% Castro::estTimeStep() 21 0.0169 0.06545 0.1121 3.30% FabArray::setVal() 143 0.07054 0.07388 0.07801 2.29% Castro::reset_internal_energy(Fab) 1008 0.04832 0.04987 0.05126 1.51% FabArray::ParallelCopy_finish() 41 0.03007 0.03742 0.04929 1.45% Castro::normalize_species() 62 0.04127 0.04207 0.04362 1.28% StateData::FillBoundary(geom) 41 0.0388 0.04172 0.04356 1.28% FabArray::ParallelCopy_nowait() 41 0.03977 0.04237 0.04354 1.28% FillPatchIterator::Initialize 41 0.02442 0.03177 0.03501 1.03% Gravity::interpolate_monopole_grav() 21 0.02749 0.02781 0.02857 0.84% Castro::construct_new_gravity_source() 10 0.02299 0.0248 0.02689 0.79% Castro::expand_state() 10 0.01506 0.01977 0.02243 0.66% Castro::computeTemp() 63 0.01812 0.01882 0.0199 0.58% Castro::initialize_do_advance() 10 0.01469 0.01707 0.01824 0.54% MultiFab::Saxpy() 20 0.01502 0.01611 0.01681 0.49% Castro::initialize_advance() 10 0.01058 0.01256 0.01462 0.43% VisMF::Write(FabArray) 2 0.01161 0.01224 0.01457 0.43% Gravity::get_new_grav_vector() 11 0.01058 0.01152 0.01336 0.39% Castro::construct_old_gravity_source() 10 0.01103 0.01177 0.01234 0.36% MultiFab::contains_nan() 20 0.0104 0.01127 0.01214 0.36% FabArray::setDomainBndry() 41 0.007309 0.01059 0.01198 0.35% Amr::writePlotFile() 2 0.008718 0.011 0.01152 0.34% Gravity::get_old_grav_vector() 10 0.008553 0.009537 0.01097 0.32% Castro::construct_new_source() 50 0.006443 0.006707 0.007071 0.21% Castro::enforce_min_density() 62 0.006159 0.006401 0.006751 0.20% Castro::initMFs() 1 0.005334 0.005804 0.006534 0.19% StateData::define() 4 0.004435 0.004668 0.004937 0.15% Castro::swap_state_time_levels() 10 0.002949 0.003812 0.004252 0.12% main() 1 0.003697 0.003861 0.004048 0.12% Castro::buildMetrics() 1 0.001247 0.001322 0.001447 0.04% Castro::finalize_do_advance() 10 0.0007966 0.0009987 0.001096 0.03% Amr::coarseTimeStep() 10 0.0003946 0.0005494 0.0009054 0.03% Amr::timeStep() 10 0.0001704 0.0002243 0.0004236 0.01% Amr::InitAmr() 1 0.0002765 0.0002992 0.0003755 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002894 0.0003005 0.0003272 0.01% Castro::clean_state() 62 0.0001392 0.0001616 0.0001777 0.01% StateDataPhysBCFunct::() 41 0.0001241 0.0001391 0.00016 0.00% Castro::enforce_consistent_e() 1 7.68e-05 8.824e-05 9.784e-05 0.00% Amr::FinalizeInit() 1 3.322e-06 1.611e-05 9.306e-05 0.00% DistributionMapping::LeastUsedCPUs() 1 6.825e-06 7.576e-05 9.228e-05 0.00% Castro::construct_old_source() 50 5.605e-05 7.219e-05 8.981e-05 0.00% Castro::Castro() 1 5.357e-05 6.65e-05 8.649e-05 0.00% Castro::subcycle_advance_ctu() 10 3.97e-05 6.211e-05 8.157e-05 0.00% FillPatchSingleLevel 41 5.542e-05 6.572e-05 7.876e-05 0.00% Castro::do_old_sources() 10 5.287e-05 6.215e-05 7.743e-05 0.00% Castro::do_new_sources() 10 5.544e-05 6.473e-05 7.567e-05 0.00% FabArray::ParallelCopy() 41 5.389e-05 6.065e-05 7.031e-05 0.00% FabArrayBase::getCPC() 41 4.214e-05 5.41e-05 6.534e-05 0.00% Amr::writeSmallPlotFile() 1 3.263e-05 5.307e-05 6.168e-05 0.00% Castro::finalize_advance() 10 5.058e-05 5.341e-05 5.73e-05 0.00% Castro::apply_source_to_state() 20 4.026e-05 4.649e-05 5.706e-05 0.00% Castro::construct_old_gravity() 10 4.405e-05 4.736e-05 5.275e-05 0.00% Castro::advance() 10 3.857e-05 4.309e-05 5.169e-05 0.00% Castro::construct_new_gravity() 10 3.883e-05 4.177e-05 4.674e-05 0.00% Amr::defBaseLevel() 1 2.359e-05 2.834e-05 3.666e-05 0.00% Castro::enforce_speed_limit() 62 2.345e-05 2.828e-05 3.317e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.473e-05 2.548e-05 3.145e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.69e-05 3.141e-05 0.00% Castro::check_for_nan() 20 2.031e-05 2.237e-05 2.563e-05 0.00% Gravity::swapTimeLevels() 10 1.116e-05 1.323e-05 1.653e-05 0.00% Castro::post_init() 1 8.625e-06 1.016e-05 1.428e-05 0.00% Castro::post_timestep() 10 9.198e-06 1.048e-05 1.283e-05 0.00% Amr::initSubcycle() 1 8.108e-06 9.463e-06 1.208e-05 0.00% Castro::create_source_corrector() 10 8.562e-06 9.909e-06 1.139e-05 0.00% Castro::FluxRegCrseInit 10 8.639e-06 1.047e-05 1.134e-05 0.00% Gravity::set_mass_offset() 10 9.225e-06 1.005e-05 1.085e-05 0.00% Castro::computeNewDt() 9 7.612e-06 8.468e-06 9.334e-06 0.00% Amr::init() 1 1.832e-06 2.915e-06 8.347e-06 0.00% Castro::retry_advance_ctu() 10 4.513e-06 5.977e-06 7.378e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.901e-06 4.782e-06 7.32e-06 0.00% Amr::InitializeInit() 1 2.077e-06 2.738e-06 5.858e-06 0.00% Castro::computeInitialDt() 2 2.894e-06 4.171e-06 5.286e-06 0.00% Castro::post_regrid() 1 1.847e-06 3.13e-06 4.967e-06 0.00% Castro::FluxRegFineAdd() 10 2.207e-06 2.588e-06 3.12e-06 0.00% Amr::initialInit() 1 1.292e-06 1.654e-06 2.548e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.11e-06 1.297e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.402 3.402 3.403 100.00% Amr::coarseTimeStep() 10 3.203 3.203 3.203 94.14% Amr::timeStep() 10 3.194 3.194 3.195 93.89% Castro::advance() 10 3.178 3.178 3.179 93.42% Castro::subcycle_advance_ctu() 10 3.099 3.102 3.104 91.23% Castro::do_advance_ctu() 10 3.099 3.102 3.104 91.23% Castro::construct_ctu_hydro_source() 10 2.188 2.259 2.285 67.16% Gravity::make_radial_gravity() 21 0.3342 0.3439 0.3533 10.38% Gravity::get_new_grav_vector() 11 0.2224 0.2236 0.2245 6.60% Castro::construct_old_gravity() 10 0.1998 0.2064 0.2139 6.29% Gravity::get_old_grav_vector() 10 0.1988 0.2056 0.2131 6.26% Castro::construct_new_gravity() 10 0.1967 0.1974 0.1979 5.82% Amr::init() 1 0.1854 0.1855 0.1855 5.45% Amr::initialInit() 1 0.1716 0.1718 0.172 5.06% FillPatchIterator::Initialize 41 0.1581 0.1642 0.1692 4.97% Castro::initialize_do_advance() 10 0.1488 0.1576 0.1624 4.77% Amr::InitializeInit() 1 0.05597 0.09839 0.1422 4.18% Amr::defBaseLevel() 1 0.05597 0.09839 0.1422 4.18% FillPatchSingleLevel 41 0.1149 0.1219 0.1283 3.77% Castro::initData() 1 0.04242 0.084 0.1267 3.72% Castro::clean_state() 62 0.1138 0.1167 0.1197 3.52% Amr::FinalizeInit() 1 0.02965 0.07339 0.1158 3.40% Castro::expand_state() 10 0.101 0.1093 0.114 3.35% Castro::estTimeStep() 21 0.0169 0.06545 0.1121 3.30% FabArray::ParallelCopy() 41 0.07252 0.07994 0.08922 2.62% Castro::computeInitialDt() 2 0.001699 0.04546 0.08788 2.58% Castro::initialize_advance() 10 0.07417 0.07653 0.07977 2.34% FabArray::setVal() 143 0.07054 0.07388 0.07801 2.29% Castro::computeTemp() 63 0.06706 0.06899 0.07107 2.09% Castro::do_new_sources() 10 0.06176 0.06562 0.06984 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04861 0.05017 0.05159 1.52% Castro::reset_internal_energy(Fab) 1008 0.04832 0.04987 0.05126 1.51% Castro::do_old_sources() 10 0.04843 0.04895 0.04966 1.46% FabArray::ParallelCopy_finish() 41 0.03007 0.03742 0.04929 1.45% StateDataPhysBCFunct::() 41 0.03896 0.04186 0.04371 1.28% Castro::normalize_species() 62 0.04127 0.04207 0.04362 1.28% FabArray::ParallelCopy_nowait() 41 0.03987 0.04245 0.04362 1.28% StateData::FillBoundary(geom) 41 0.0388 0.04172 0.04356 1.28% Castro::construct_new_source() 50 0.02944 0.0315 0.03396 1.00% Gravity::interpolate_monopole_grav() 21 0.02749 0.02781 0.02857 0.84% Castro::post_init() 1 0.02708 0.02722 0.02736 0.80% Castro::construct_new_gravity_source() 10 0.02299 0.0248 0.02689 0.79% Amr::writePlotFile() 2 0.02299 0.02324 0.02345 0.69% Castro::apply_source_to_state() 20 0.01506 0.01615 0.01685 0.50% MultiFab::Saxpy() 20 0.01502 0.01611 0.01681 0.49% Castro::post_timestep() 10 0.01535 0.01573 0.01604 0.47% VisMF::Write(FabArray) 2 0.01161 0.01224 0.01457 0.43% Castro::construct_old_source() 50 0.01108 0.01184 0.01243 0.37% Castro::construct_old_gravity_source() 10 0.01103 0.01177 0.01234 0.36% Castro::check_for_nan() 20 0.01042 0.0113 0.01216 0.36% MultiFab::contains_nan() 20 0.0104 0.01127 0.01214 0.36% FabArray::setDomainBndry() 41 0.007309 0.01059 0.01198 0.35% Castro::Castro() 1 0.008948 0.009587 0.01042 0.31% Castro::computeNewDt() 9 0.006782 0.00722 0.007551 0.22% Castro::enforce_min_density() 62 0.006159 0.006401 0.006751 0.20% Castro::initMFs() 1 0.005334 0.005804 0.006534 0.19% AmrLevel::AmrLevel(dm) 1 0.004464 0.004693 0.004965 0.15% StateData::define() 4 0.004435 0.004668 0.004937 0.15% Castro::swap_state_time_levels() 10 0.002949 0.003812 0.004252 0.12% Castro::post_regrid() 1 0.001558 0.00162 0.001886 0.06% Castro::buildMetrics() 1 0.001367 0.001457 0.0016 0.05% Castro::finalize_do_advance() 10 0.0007966 0.0009987 0.001096 0.03% Amr::InitAmr() 1 0.0002854 0.0003087 0.0003836 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.188e-05 8.165e-05 0.0001005 0.00% Castro::enforce_consistent_e() 1 7.68e-05 8.824e-05 9.784e-05 0.00% FabArrayBase::getCPC() 41 6.782e-05 8.099e-05 9.675e-05 0.00% DistributionMapping::LeastUsedCPUs() 1 6.825e-06 7.576e-05 9.228e-05 0.00% Castro::finalize_advance() 10 6.284e-05 6.647e-05 6.993e-05 0.00% Amr::writeSmallPlotFile() 1 3.263e-05 5.307e-05 6.168e-05 0.00% Castro::enforce_speed_limit() 62 2.345e-05 2.828e-05 3.317e-05 0.00% FabArrayBase::CPC::define() 2 2.321e-05 2.69e-05 3.141e-05 0.00% Gravity::swapTimeLevels() 10 1.116e-05 1.323e-05 1.653e-05 0.00% Amr::initSubcycle() 1 8.108e-06 9.463e-06 1.208e-05 0.00% Castro::create_source_corrector() 10 8.562e-06 9.909e-06 1.139e-05 0.00% Castro::FluxRegCrseInit 10 8.639e-06 1.047e-05 1.134e-05 0.00% Gravity::set_mass_offset() 10 9.225e-06 1.005e-05 1.085e-05 0.00% Castro::retry_advance_ctu() 10 4.513e-06 5.977e-06 7.378e-06 0.00% Castro::FluxRegFineAdd() 10 2.207e-06 2.588e-06 3.12e-06 0.00% DistributionMapping::Distribute() 1 9.29e-07 1.11e-06 1.297e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-4-gef52970b80e3) finalized