MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-4-gef52970b80e3) initialized Starting run at 15:06:52 UTC on 2022-05-06. Successfully read inputs file ... Castro git describe: 22.05-11-g090fc4a17 AMReX git describe: 22.05-4-gef52970b8 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.012872699 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.3405205 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.340096292 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.31675097 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.319453611 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.319386346 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.337970233 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.303048771 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.298757475 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.298707474 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.298814169 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009587019 seconds Ending run at 15:06:55 UTC on 2022-05-06. Run time = 3.399917627 Run time without initialization = 3.186731217 Average number of zones advanced per microsecond: 0.823 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.4 ... 3.4 ... 3.4 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2217 2.2488 2.2963 67.54% Gravity::make_radial_gravity() 21 0.3301 0.3379 0.3545 10.43% Castro::initData() 1 0.03825 0.08615 0.147 4.32% Castro::estTimeStep() 21 0.028 0.08732 0.1406 4.13% Castro::do_advance_ctu() 10 0.04292 0.09036 0.1152 3.39% FabArray::ParallelCopy_finish() 41 0.03115 0.04196 0.08021 2.36% FabArray::setVal() 143 0.05178 0.06715 0.07276 2.14% Castro::reset_internal_energy(Fab) 1008 0.0482 0.04985 0.05128 1.51% Castro::normalize_species() 62 0.04147 0.04211 0.04283 1.26% StateData::FillBoundary(geom) 41 0.03924 0.04057 0.04162 1.22% FabArray::ParallelCopy_nowait() 41 0.03316 0.03952 0.04084 1.20% FillPatchIterator::Initialize 41 0.02376 0.02874 0.03195 0.94% Gravity::interpolate_monopole_grav() 21 0.02771 0.02785 0.02843 0.84% Castro::construct_new_gravity_source() 10 0.02013 0.02331 0.02622 0.77% Castro::expand_state() 10 0.01186 0.01759 0.02003 0.59% Castro::computeTemp() 63 0.01828 0.01868 0.01917 0.56% Castro::initialize_do_advance() 10 0.0108 0.01532 0.01682 0.49% MultiFab::Saxpy() 20 0.01311 0.0146 0.01557 0.46% VisMF::Write(FabArray) 2 0.01164 0.0123 0.01439 0.42% Gravity::get_new_grav_vector() 11 0.009638 0.01091 0.01304 0.38% Castro::initialize_advance() 10 0.00382 0.01028 0.01278 0.38% MultiFab::contains_nan() 20 0.009944 0.0111 0.01196 0.35% Castro::construct_old_gravity_source() 10 0.007184 0.01069 0.01152 0.34% Amr::writePlotFile() 2 0.00831 0.01059 0.01113 0.33% FabArray::setDomainBndry() 41 0.006511 0.009298 0.01094 0.32% Gravity::get_old_grav_vector() 10 0.006871 0.008524 0.01004 0.30% Castro::initMFs() 1 0.005592 0.006521 0.00873 0.26% Castro::enforce_min_density() 62 0.006585 0.006801 0.007108 0.21% Castro::construct_new_source() 50 0.005736 0.006488 0.006958 0.20% StateData::define() 4 0.004623 0.00521 0.006706 0.20% main() 1 0.003503 0.003748 0.003932 0.12% Castro::swap_state_time_levels() 10 0.002835 0.003575 0.00381 0.11% Castro::buildMetrics() 1 0.00132 0.001508 0.001937 0.06% Amr::coarseTimeStep() 10 0.0003842 0.0007374 0.001697 0.05% Castro::finalize_do_advance() 10 0.0004558 0.001074 0.001276 0.04% Amr::InitAmr() 1 0.0002716 0.0003491 0.0006057 0.02% Amr::timeStep() 10 0.0001663 0.0002275 0.0005059 0.01% DistributionMapping::LeastUsedCPUs() 1 1.147e-05 0.0003153 0.0003899 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002817 0.0002952 0.0003231 0.01% Castro::clean_state() 62 0.0001407 0.0001531 0.0001668 0.00% StateDataPhysBCFunct::() 41 0.0001062 0.0001395 0.0001573 0.00% Castro::enforce_consistent_e() 1 7.955e-05 9.785e-05 0.0001468 0.00% Castro::construct_old_source() 50 4.506e-05 6.754e-05 8.527e-05 0.00% FillPatchSingleLevel 41 5.752e-05 6.597e-05 7.492e-05 0.00% Castro::subcycle_advance_ctu() 10 3.396e-05 5.828e-05 7.355e-05 0.00% Castro::Castro() 1 5.104e-05 5.941e-05 7.03e-05 0.00% Amr::writeSmallPlotFile() 1 3.526e-05 5.714e-05 7.018e-05 0.00% Amr::FinalizeInit() 1 3.939e-06 1.273e-05 6.867e-05 0.00% Castro::do_new_sources() 10 4.914e-05 5.919e-05 6.758e-05 0.00% Castro::do_old_sources() 10 4.157e-05 5.614e-05 6.48e-05 0.00% FabArrayBase::getCPC() 41 3.915e-05 5.073e-05 6.351e-05 0.00% FabArray::ParallelCopy() 41 5.24e-05 5.892e-05 6.326e-05 0.00% Castro::apply_source_to_state() 20 3.664e-05 4.569e-05 6.153e-05 0.00% Castro::advance() 10 3.381e-05 4.283e-05 5.747e-05 0.00% Castro::construct_old_gravity() 10 4.167e-05 4.84e-05 5.66e-05 0.00% Castro::finalize_advance() 10 4.628e-05 5.109e-05 5.506e-05 0.00% Castro::construct_new_gravity() 10 3.723e-05 4.107e-05 4.658e-05 0.00% FabArrayBase::CPC::define() 2 2.347e-05 2.764e-05 3.183e-05 0.00% Amr::defBaseLevel() 1 2.294e-05 2.809e-05 3.178e-05 0.00% Castro::enforce_speed_limit() 62 2.443e-05 2.88e-05 3.141e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.672e-05 2.084e-05 2.785e-05 0.00% Castro::check_for_nan() 20 1.939e-05 2.177e-05 2.411e-05 0.00% Gravity::swapTimeLevels() 10 9.788e-06 1.382e-05 1.938e-05 0.00% Castro::post_init() 1 8.663e-06 1.162e-05 1.673e-05 0.00% Amr::initSubcycle() 1 8.207e-06 1.05e-05 1.546e-05 0.00% Castro::create_source_corrector() 10 8.73e-06 1.084e-05 1.412e-05 0.00% Castro::FluxRegCrseInit 10 8.365e-06 9.467e-06 1.181e-05 0.00% Castro::post_timestep() 10 8.719e-06 1.066e-05 1.17e-05 0.00% Amr::InitializeInit() 1 2.032e-06 3.64e-06 1.04e-05 0.00% Gravity::set_mass_offset() 10 8.901e-06 9.549e-06 1.023e-05 0.00% Castro::computeNewDt() 9 7.503e-06 8.433e-06 9.387e-06 0.00% Castro::retry_advance_ctu() 10 5.2e-06 5.804e-06 6.677e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.835e-06 4.677e-06 6.443e-06 0.00% Castro::computeInitialDt() 2 3.401e-06 4.101e-06 4.743e-06 0.00% Castro::post_regrid() 1 2.033e-06 2.718e-06 4.723e-06 0.00% Castro::FluxRegFineAdd() 10 2.18e-06 2.561e-06 3.659e-06 0.00% Amr::init() 1 1.928e-06 2.337e-06 2.844e-06 0.00% Amr::initialInit() 1 1.413e-06 1.611e-06 2.055e-06 0.00% DistributionMapping::Distribute() 1 1.024e-06 1.276e-06 1.626e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.4 3.4 3.4 100.00% Amr::coarseTimeStep() 10 3.173 3.173 3.173 93.33% Amr::timeStep() 10 3.164 3.164 3.165 93.08% Castro::advance() 10 3.147 3.148 3.148 92.60% Castro::subcycle_advance_ctu() 10 3.075 3.078 3.096 91.07% Castro::do_advance_ctu() 10 3.075 3.078 3.096 91.06% Castro::construct_ctu_hydro_source() 10 2.222 2.249 2.296 67.54% Gravity::make_radial_gravity() 21 0.3301 0.3379 0.3545 10.43% Gravity::get_new_grav_vector() 11 0.2186 0.2202 0.2218 6.52% Castro::construct_old_gravity() 10 0.1965 0.2008 0.215 6.32% Gravity::get_old_grav_vector() 10 0.1957 0.2 0.2144 6.31% Amr::init() 1 0.2124 0.2127 0.2128 6.26% Amr::initialInit() 1 0.1994 0.1995 0.1997 5.87% Castro::construct_new_gravity() 10 0.1941 0.1952 0.1962 5.77% FillPatchIterator::Initialize 41 0.1505 0.1604 0.1848 5.43% Amr::InitializeInit() 1 0.05681 0.1061 0.1709 5.03% Amr::defBaseLevel() 1 0.05681 0.1061 0.1709 5.03% Castro::initialize_do_advance() 10 0.1457 0.1517 0.1599 4.70% FillPatchSingleLevel 41 0.1136 0.1224 0.1545 4.54% Castro::initData() 1 0.04228 0.09031 0.1515 4.46% Amr::FinalizeInit() 1 0.02845 0.09334 0.1428 4.20% Castro::estTimeStep() 21 0.028 0.08732 0.1406 4.13% Castro::clean_state() 62 0.1146 0.1169 0.1195 3.52% Castro::expand_state() 10 0.09932 0.106 0.1194 3.51% Castro::computeInitialDt() 2 0.001758 0.06666 0.1161 3.41% FabArray::ParallelCopy() 41 0.07195 0.08163 0.1135 3.34% FabArray::ParallelCopy_finish() 41 0.03115 0.04196 0.08021 2.36% Castro::initialize_advance() 10 0.05118 0.06959 0.0732 2.15% FabArray::setVal() 143 0.05178 0.06715 0.07276 2.14% Castro::computeTemp() 63 0.06686 0.06883 0.0705 2.07% Castro::do_new_sources() 10 0.05766 0.06265 0.0683 2.01% Castro::reset_internal_energy(MultiFab) 63 0.0485 0.05014 0.05156 1.52% Castro::reset_internal_energy(Fab) 1008 0.0482 0.04985 0.05128 1.51% Castro::do_old_sources() 10 0.04072 0.04674 0.04939 1.45% Castro::normalize_species() 62 0.04147 0.04211 0.04283 1.26% StateDataPhysBCFunct::() 41 0.03938 0.04071 0.04177 1.23% StateData::FillBoundary(geom) 41 0.03924 0.04057 0.04162 1.22% FabArray::ParallelCopy_nowait() 41 0.03325 0.0396 0.04091 1.20% Castro::construct_new_source() 50 0.02586 0.0298 0.03317 0.98% Gravity::interpolate_monopole_grav() 21 0.02771 0.02785 0.02843 0.84% Castro::construct_new_gravity_source() 10 0.02013 0.02331 0.02622 0.77% Castro::post_init() 1 0.02575 0.02597 0.02614 0.77% Amr::writePlotFile() 2 0.0227 0.02289 0.02306 0.68% Castro::post_timestep() 10 0.01576 0.0159 0.01608 0.47% Castro::apply_source_to_state() 20 0.01315 0.01465 0.01561 0.46% MultiFab::Saxpy() 20 0.01311 0.0146 0.01557 0.46% VisMF::Write(FabArray) 2 0.01164 0.0123 0.01439 0.42% Castro::Castro() 1 0.009341 0.01025 0.0125 0.37% Castro::check_for_nan() 20 0.009964 0.01112 0.01198 0.35% MultiFab::contains_nan() 20 0.009944 0.0111 0.01196 0.35% Castro::construct_old_source() 50 0.007229 0.01076 0.01159 0.34% Castro::construct_old_gravity_source() 10 0.007184 0.01069 0.01152 0.34% FabArray::setDomainBndry() 41 0.006511 0.009298 0.01094 0.32% Castro::initMFs() 1 0.005592 0.006521 0.00873 0.26% Castro::computeNewDt() 9 0.006804 0.007357 0.0079 0.23% Castro::enforce_min_density() 62 0.006585 0.006801 0.007108 0.21% AmrLevel::AmrLevel(dm) 1 0.004646 0.005231 0.00673 0.20% StateData::define() 4 0.004623 0.00521 0.006706 0.20% Castro::swap_state_time_levels() 10 0.002835 0.003575 0.00381 0.11% Castro::buildMetrics() 1 0.001444 0.00166 0.002183 0.06% Castro::post_regrid() 1 0.001542 0.001619 0.001846 0.05% Castro::finalize_do_advance() 10 0.0004558 0.001074 0.001276 0.04% Amr::InitAmr() 1 0.000281 0.0003596 0.0006212 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.755e-05 0.0003213 0.0003979 0.01% DistributionMapping::LeastUsedCPUs() 1 1.147e-05 0.0003153 0.0003899 0.01% Castro::enforce_consistent_e() 1 7.955e-05 9.785e-05 0.0001468 0.00% FabArrayBase::getCPC() 41 6.262e-05 7.837e-05 9.375e-05 0.00% Amr::writeSmallPlotFile() 1 3.526e-05 5.714e-05 7.018e-05 0.00% Castro::finalize_advance() 10 5.738e-05 6.312e-05 6.74e-05 0.00% FabArrayBase::CPC::define() 2 2.347e-05 2.764e-05 3.183e-05 0.00% Castro::enforce_speed_limit() 62 2.443e-05 2.88e-05 3.141e-05 0.00% Gravity::swapTimeLevels() 10 9.788e-06 1.382e-05 1.938e-05 0.00% Amr::initSubcycle() 1 8.207e-06 1.05e-05 1.546e-05 0.00% Castro::create_source_corrector() 10 8.73e-06 1.084e-05 1.412e-05 0.00% Castro::FluxRegCrseInit 10 8.365e-06 9.467e-06 1.181e-05 0.00% Gravity::set_mass_offset() 10 8.901e-06 9.549e-06 1.023e-05 0.00% Castro::retry_advance_ctu() 10 5.2e-06 5.804e-06 6.677e-06 0.00% Castro::FluxRegFineAdd() 10 2.18e-06 2.561e-06 3.659e-06 0.00% DistributionMapping::Distribute() 1 1.024e-06 1.276e-06 1.626e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-4-gef52970b80e3) finalized