MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-6-gc4ad207584b0) initialized Starting run at 05:38:02 UTC on 2022-05-11. Successfully read inputs file ... Castro git describe: 22.05-12-gb79cf4624 AMReX git describe: 22.05-6-gc4ad20758 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013049494 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.345497854 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.342058616 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.325550118 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.325972344 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.32538917 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346064373 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.311117264 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.304113013 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.304825797 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.304319847 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009484253 seconds Ending run at 05:38:06 UTC on 2022-05-11. Run time = 3.425273268 Run time without initialization = 3.247932202 Average number of zones advanced per microsecond: 0.807 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.424 ... 3.425 ... 3.425 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2010 2.2931 2.3238 67.84% Gravity::make_radial_gravity() 21 0.3344 0.3423 0.3548 10.36% Castro::do_advance_ctu() 10 0.05425 0.08621 0.1799 5.25% Castro::initData() 1 0.03979 0.0805 0.115 3.36% Castro::estTimeStep() 21 0.01819 0.05674 0.101 2.95% FabArray::setVal() 143 0.07035 0.07316 0.07761 2.27% FabArray::ParallelCopy_finish() 41 0.03301 0.03964 0.05543 1.62% Castro::reset_internal_energy(Fab) 1008 0.04871 0.04929 0.05076 1.48% FabArray::ParallelCopy_nowait() 41 0.04045 0.04229 0.04342 1.27% StateData::FillBoundary(geom) 41 0.03932 0.04101 0.04316 1.26% Castro::normalize_species() 62 0.04046 0.04119 0.04171 1.22% FillPatchIterator::Initialize 41 0.0245 0.03143 0.03437 1.00% Gravity::interpolate_monopole_grav() 21 0.02689 0.02749 0.02791 0.81% Castro::construct_new_gravity_source() 10 0.02306 0.02463 0.0266 0.78% Castro::expand_state() 10 0.01281 0.01884 0.0211 0.62% Castro::computeTemp() 63 0.01799 0.01875 0.01921 0.56% Castro::initialize_do_advance() 10 0.01068 0.01612 0.01813 0.53% MultiFab::Saxpy() 20 0.015 0.01593 0.01654 0.48% Castro::initialize_advance() 10 0.0106 0.01241 0.0144 0.42% VisMF::Write(FabArray) 2 0.01133 0.01197 0.01433 0.42% Gravity::get_new_grav_vector() 11 0.01098 0.01159 0.01311 0.38% Castro::construct_old_gravity_source() 10 0.009484 0.01169 0.01249 0.36% FabArray::setDomainBndry() 41 0.007262 0.01044 0.0119 0.35% MultiFab::contains_nan() 20 0.01043 0.01124 0.0119 0.35% Amr::writePlotFile() 2 0.008394 0.01084 0.01151 0.34% Gravity::get_old_grav_vector() 10 0.008179 0.009502 0.0107 0.31% Castro::construct_new_source() 50 0.006521 0.006711 0.006912 0.20% Castro::enforce_min_density() 62 0.006039 0.006238 0.006464 0.19% Castro::initMFs() 1 0.005214 0.005739 0.006429 0.19% StateData::define() 4 0.004261 0.004608 0.004939 0.14% main() 1 0.003364 0.003951 0.004324 0.13% Castro::swap_state_time_levels() 10 0.002948 0.003746 0.00387 0.11% Castro::finalize_do_advance() 10 0.001006 0.001256 0.00143 0.04% Castro::buildMetrics() 1 0.001213 0.001323 0.001422 0.04% Amr::coarseTimeStep() 10 0.0003238 0.0006393 0.001149 0.03% Amr::timeStep() 10 0.0001593 0.0002175 0.0004003 0.01% Amr::InitAmr() 1 0.0002739 0.0003275 0.0003997 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002864 0.0003051 0.0003288 0.01% Castro::clean_state() 62 0.0001598 0.0001723 0.0002169 0.01% StateDataPhysBCFunct::() 41 0.0001281 0.0001384 0.0001569 0.00% DistributionMapping::LeastUsedCPUs() 1 7.297e-06 7.21e-05 0.000124 0.00% FabArray::ParallelCopy() 41 6.347e-05 7.385e-05 9.629e-05 0.00% Castro::enforce_consistent_e() 1 7.986e-05 8.57e-05 9.287e-05 0.00% FillPatchSingleLevel 41 6.848e-05 7.798e-05 9.083e-05 0.00% Castro::construct_old_source() 50 6.568e-05 8.193e-05 8.856e-05 0.00% Castro::do_old_sources() 10 6.333e-05 6.969e-05 8.277e-05 0.00% Castro::Castro() 1 5.821e-05 6.724e-05 8.101e-05 0.00% Castro::subcycle_advance_ctu() 10 4.663e-05 6.166e-05 7.972e-05 0.00% Castro::do_new_sources() 10 5.775e-05 6.672e-05 7.225e-05 0.00% FabArrayBase::getCPC() 41 4.283e-05 5.539e-05 7.224e-05 0.00% Amr::FinalizeInit() 1 3.964e-06 1.22e-05 6.749e-05 0.00% Castro::construct_old_gravity() 10 5.006e-05 5.593e-05 6.535e-05 0.00% Castro::apply_source_to_state() 20 4.372e-05 5.183e-05 6.146e-05 0.00% Castro::finalize_advance() 10 4.686e-05 5.225e-05 5.797e-05 0.00% Amr::writeSmallPlotFile() 1 2.477e-05 4.461e-05 5.545e-05 0.00% Castro::construct_new_gravity() 10 4.05e-05 4.681e-05 5.314e-05 0.00% Castro::advance() 10 3.936e-05 4.225e-05 4.772e-05 0.00% Castro::enforce_speed_limit() 62 2.81e-05 3.012e-05 3.563e-05 0.00% FabArrayBase::CPC::define() 2 2.283e-05 2.622e-05 3.304e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.3e-05 2.117e-05 3.258e-05 0.00% Amr::defBaseLevel() 1 2.771e-05 2.932e-05 3.258e-05 0.00% Castro::check_for_nan() 20 1.826e-05 2.288e-05 2.656e-05 0.00% Gravity::swapTimeLevels() 10 1.056e-05 1.382e-05 1.773e-05 0.00% Castro::post_init() 1 8.064e-06 1.119e-05 1.668e-05 0.00% Castro::create_source_corrector() 10 8.83e-06 1.05e-05 1.629e-05 0.00% Castro::post_timestep() 10 9.006e-06 1.126e-05 1.265e-05 0.00% Gravity::set_mass_offset() 10 8.312e-06 9.922e-06 1.157e-05 0.00% Castro::FluxRegCrseInit 10 7.795e-06 9.653e-06 1.156e-05 0.00% Amr::initSubcycle() 1 8.508e-06 9.572e-06 1.035e-05 0.00% Castro::computeNewDt() 9 8.247e-06 8.465e-06 8.646e-06 0.00% Amr::init() 1 1.78e-06 2.927e-06 8.632e-06 0.00% Amr::InitializeInit() 1 1.921e-06 2.855e-06 6.329e-06 0.00% Castro::retry_advance_ctu() 10 4.971e-06 5.607e-06 6.145e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.688e-06 4.571e-06 5.98e-06 0.00% Castro::computeInitialDt() 2 3.135e-06 3.919e-06 5.182e-06 0.00% Castro::post_regrid() 1 1.863e-06 2.765e-06 3.891e-06 0.00% Castro::FluxRegFineAdd() 10 2.023e-06 2.392e-06 2.866e-06 0.00% Amr::initialInit() 1 1.308e-06 1.694e-06 2.362e-06 0.00% DistributionMapping::Distribute() 1 9e-07 1.107e-06 1.193e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.424 3.425 3.425 100.00% Amr::coarseTimeStep() 10 3.234 3.234 3.234 94.42% Amr::timeStep() 10 3.224 3.225 3.225 94.16% Castro::advance() 10 3.209 3.209 3.209 93.69% Castro::subcycle_advance_ctu() 10 3.131 3.133 3.136 91.54% Castro::do_advance_ctu() 10 3.131 3.133 3.135 91.54% Castro::construct_ctu_hydro_source() 10 2.201 2.293 2.324 67.84% Gravity::make_radial_gravity() 21 0.3344 0.3423 0.3548 10.36% Gravity::get_new_grav_vector() 11 0.2236 0.2245 0.2254 6.58% Castro::construct_old_gravity() 10 0.1985 0.204 0.2144 6.26% Gravity::get_old_grav_vector() 10 0.1977 0.2032 0.2136 6.24% Castro::construct_new_gravity() 10 0.1976 0.1981 0.1986 5.80% Amr::init() 1 0.1768 0.1769 0.1769 5.17% FillPatchIterator::Initialize 41 0.1629 0.1652 0.1687 4.93% Amr::initialInit() 1 0.1634 0.1636 0.1639 4.78% Castro::initialize_do_advance() 10 0.1437 0.1546 0.1606 4.69% FillPatchSingleLevel 41 0.1182 0.1233 0.1356 3.96% Amr::InitializeInit() 1 0.05679 0.09876 0.1338 3.90% Amr::defBaseLevel() 1 0.05678 0.09875 0.1338 3.90% Castro::initData() 1 0.04401 0.08449 0.1189 3.47% Castro::clean_state() 62 0.1133 0.115 0.1165 3.40% Castro::expand_state() 10 0.1044 0.1083 0.1135 3.31% Amr::FinalizeInit() 1 0.02979 0.06486 0.1068 3.12% Castro::estTimeStep() 21 0.01819 0.05674 0.101 2.95% FabArray::ParallelCopy() 41 0.07627 0.08209 0.09606 2.80% Castro::computeInitialDt() 2 0.001813 0.03686 0.07876 2.30% Castro::initialize_advance() 10 0.07347 0.07561 0.07821 2.28% FabArray::setVal() 143 0.07035 0.07316 0.07761 2.27% Castro::computeTemp() 63 0.06706 0.06835 0.07002 2.04% Castro::do_new_sources() 10 0.06212 0.06522 0.06849 2.00% FabArray::ParallelCopy_finish() 41 0.03301 0.03964 0.05543 1.62% Castro::reset_internal_energy(MultiFab) 63 0.04904 0.0496 0.05106 1.49% Castro::reset_internal_energy(Fab) 1008 0.04871 0.04929 0.05076 1.48% Castro::do_old_sources() 10 0.04735 0.04886 0.04962 1.45% FabArray::ParallelCopy_nowait() 41 0.04055 0.04237 0.04351 1.27% StateDataPhysBCFunct::() 41 0.03946 0.04115 0.04329 1.26% StateData::FillBoundary(geom) 41 0.03932 0.04101 0.04316 1.26% Castro::normalize_species() 62 0.04046 0.04119 0.04171 1.22% Castro::construct_new_source() 50 0.02958 0.03134 0.03349 0.98% Gravity::interpolate_monopole_grav() 21 0.02689 0.02749 0.02791 0.81% Castro::post_init() 1 0.02718 0.02741 0.02754 0.80% Castro::construct_new_gravity_source() 10 0.02306 0.02463 0.0266 0.78% Amr::writePlotFile() 2 0.02255 0.0228 0.02302 0.67% Castro::apply_source_to_state() 20 0.01506 0.01598 0.0166 0.48% MultiFab::Saxpy() 20 0.015 0.01593 0.01654 0.48% Castro::post_timestep() 10 0.015 0.0155 0.01584 0.46% VisMF::Write(FabArray) 2 0.01133 0.01197 0.01433 0.42% Castro::construct_old_source() 50 0.00955 0.01177 0.01258 0.37% Castro::construct_old_gravity_source() 10 0.009484 0.01169 0.01249 0.36% Castro::check_for_nan() 20 0.01044 0.01126 0.01192 0.35% FabArray::setDomainBndry() 41 0.007262 0.01044 0.0119 0.35% MultiFab::contains_nan() 20 0.01043 0.01124 0.0119 0.35% Castro::Castro() 1 0.008432 0.009531 0.01041 0.30% Castro::computeNewDt() 9 0.006948 0.007794 0.008465 0.25% Castro::enforce_min_density() 62 0.006039 0.006238 0.006464 0.19% Castro::initMFs() 1 0.005214 0.005739 0.006429 0.19% AmrLevel::AmrLevel(dm) 1 0.004277 0.00463 0.004972 0.15% StateData::define() 4 0.004261 0.004608 0.004939 0.14% Castro::swap_state_time_levels() 10 0.002948 0.003746 0.00387 0.11% Castro::post_regrid() 1 0.001505 0.001618 0.00196 0.06% Castro::buildMetrics() 1 0.001333 0.001458 0.001574 0.05% Castro::finalize_do_advance() 10 0.001006 0.001256 0.00143 0.04% Amr::InitAmr() 1 0.0002834 0.0003371 0.0004082 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.21e-05 7.777e-05 0.0001312 0.00% DistributionMapping::LeastUsedCPUs() 1 7.297e-06 7.21e-05 0.000124 0.00% FabArrayBase::getCPC() 41 6.566e-05 8.161e-05 9.924e-05 0.00% Castro::enforce_consistent_e() 1 7.986e-05 8.57e-05 9.287e-05 0.00% Castro::finalize_advance() 10 5.856e-05 6.429e-05 6.966e-05 0.00% Amr::writeSmallPlotFile() 1 2.477e-05 4.461e-05 5.545e-05 0.00% Castro::enforce_speed_limit() 62 2.81e-05 3.012e-05 3.563e-05 0.00% FabArrayBase::CPC::define() 2 2.283e-05 2.622e-05 3.304e-05 0.00% Gravity::swapTimeLevels() 10 1.056e-05 1.382e-05 1.773e-05 0.00% Castro::create_source_corrector() 10 8.83e-06 1.05e-05 1.629e-05 0.00% Gravity::set_mass_offset() 10 8.312e-06 9.922e-06 1.157e-05 0.00% Castro::FluxRegCrseInit 10 7.795e-06 9.653e-06 1.156e-05 0.00% Amr::initSubcycle() 1 8.508e-06 9.572e-06 1.035e-05 0.00% Castro::retry_advance_ctu() 10 4.971e-06 5.607e-06 6.145e-06 0.00% Castro::FluxRegFineAdd() 10 2.023e-06 2.392e-06 2.866e-06 0.00% DistributionMapping::Distribute() 1 9e-07 1.107e-06 1.193e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-6-gc4ad207584b0) finalized