MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-10-g0b485513b4de) initialized Starting run at 12:55:45 UTC on 2022-05-12. Successfully read inputs file ... Castro git describe: 22.05-15-g275cfd66d AMReX git describe: 22.05-10-g0b485513b Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01604755 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.366758349 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339290606 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.335513116 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.334935413 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.344742992 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.330650194 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.324057772 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.32403041 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.323871041 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.324198714 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010683147 seconds Ending run at 12:55:49 UTC on 2022-05-12. Run time = 3.613010579 Run time without initialization = 3.364327387 Average number of zones advanced per microsecond: 0.779 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.61 ... 3.612 ... 3.613 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1246 2.3201 2.4100 66.70% Gravity::make_radial_gravity() 21 0.3555 0.3682 0.3922 10.85% Castro::do_advance_ctu() 10 0.05059 0.1397 0.3371 9.33% Castro::initData() 1 0.0378 0.08957 0.1645 4.55% Castro::estTimeStep() 21 0.02562 0.1089 0.1597 4.42% FabArray::ParallelCopy_finish() 41 0.03785 0.05852 0.1285 3.56% FabArray::setVal() 143 0.05495 0.06755 0.07166 1.98% Castro::reset_internal_energy(Fab) 1008 0.04682 0.05031 0.05339 1.48% FabArray::ParallelCopy_nowait() 41 0.02632 0.04214 0.04759 1.32% StateData::FillBoundary(geom) 41 0.03785 0.04194 0.04539 1.26% Castro::normalize_species() 62 0.04039 0.04213 0.04342 1.20% FillPatchIterator::Initialize 41 0.02009 0.03297 0.03808 1.05% Gravity::interpolate_monopole_grav() 21 0.02691 0.02777 0.0289 0.80% Castro::construct_new_gravity_source() 10 0.02136 0.02392 0.0258 0.71% Castro::expand_state() 10 0.009889 0.01812 0.02153 0.60% Castro::computeTemp() 63 0.01763 0.01928 0.02083 0.58% Castro::initialize_do_advance() 10 0.008497 0.01696 0.01951 0.54% VisMF::Write(FabArray) 2 0.01121 0.01274 0.01689 0.47% Amr::writePlotFile() 2 0.01004 0.01434 0.01626 0.45% MultiFab::Saxpy() 20 0.008673 0.01403 0.01599 0.44% FabArray::setDomainBndry() 41 0.005073 0.01194 0.01512 0.42% Gravity::get_new_grav_vector() 11 0.007422 0.01109 0.01255 0.35% MultiFab::contains_nan() 20 0.009786 0.01116 0.01217 0.34% Castro::construct_old_gravity_source() 10 0.005058 0.01015 0.0119 0.33% Gravity::get_old_grav_vector() 10 0.005608 0.009358 0.01098 0.30% Castro::initialize_advance() 10 0.003238 0.008974 0.01024 0.28% Castro::initMFs() 1 0.005433 0.006367 0.009062 0.25% Castro::enforce_min_density() 62 0.006178 0.006868 0.007259 0.20% Castro::construct_new_source() 50 0.004931 0.006411 0.006942 0.19% StateData::define() 4 0.004547 0.005115 0.006742 0.19% main() 1 0.00326 0.005738 0.006622 0.18% Castro::swap_state_time_levels() 10 0.002635 0.003976 0.005481 0.15% Castro::buildMetrics() 1 0.00131 0.001472 0.001928 0.05% Castro::finalize_do_advance() 10 0.0005441 0.001156 0.001393 0.04% Amr::coarseTimeStep() 10 0.0004089 0.0006158 0.001016 0.03% Amr::timeStep() 10 0.0001596 0.0002304 0.0004912 0.01% Amr::InitAmr() 1 0.0002604 0.0003234 0.000449 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002944 0.0003103 0.0003434 0.01% DistributionMapping::LeastUsedCPUs() 1 8.918e-06 0.0001504 0.0002161 0.01% Castro::clean_state() 62 0.0001571 0.0001683 0.000183 0.01% StateDataPhysBCFunct::() 41 0.0001067 0.0001303 0.000174 0.00% Castro::enforce_consistent_e() 1 7.951e-05 0.0001024 0.0001509 0.00% Castro::construct_old_source() 50 3.997e-05 7.598e-05 9.955e-05 0.00% Castro::do_old_sources() 10 3.945e-05 6.43e-05 8.005e-05 0.00% Castro::do_new_sources() 10 4.094e-05 6.633e-05 7.988e-05 0.00% Castro::Castro() 1 5.178e-05 6.267e-05 7.698e-05 0.00% Castro::subcycle_advance_ctu() 10 4.442e-05 5.551e-05 7.256e-05 0.00% FabArray::ParallelCopy() 41 4.986e-05 6.36e-05 7.131e-05 0.00% FillPatchSingleLevel 41 5.467e-05 6.347e-05 7.112e-05 0.00% Amr::FinalizeInit() 1 4.55e-06 1.313e-05 6.632e-05 0.00% Castro::construct_old_gravity() 10 3.327e-05 5.177e-05 6.42e-05 0.00% FabArrayBase::getCPC() 41 4.766e-05 5.266e-05 6.148e-05 0.00% Amr::writeSmallPlotFile() 1 2.95e-05 4.789e-05 6.09e-05 0.00% Castro::finalize_advance() 10 4.871e-05 5.123e-05 5.608e-05 0.00% Castro::apply_source_to_state() 20 3.862e-05 4.641e-05 5.153e-05 0.00% Castro::advance() 10 3.006e-05 4.251e-05 5.059e-05 0.00% Castro::construct_new_gravity() 10 3.493e-05 4.433e-05 4.946e-05 0.00% FabArrayBase::CPC::define() 2 2.231e-05 2.952e-05 4.187e-05 0.00% Amr::defBaseLevel() 1 2.735e-05 3.651e-05 4.104e-05 0.00% Castro::enforce_speed_limit() 62 2.796e-05 3.081e-05 3.466e-05 0.00% Castro::check_for_nan() 20 1.967e-05 2.447e-05 2.912e-05 0.00% Castro::computeNewDt() 9 7.388e-06 1.054e-05 2.412e-05 0.00% Castro::create_source_corrector() 10 6.51e-06 1.21e-05 2.138e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.163e-05 1.495e-05 2.106e-05 0.00% Castro::post_timestep() 10 8.226e-06 1.135e-05 1.726e-05 0.00% Gravity::swapTimeLevels() 10 6.818e-06 1.311e-05 1.676e-05 0.00% Castro::post_init() 1 9.329e-06 1.16e-05 1.414e-05 0.00% Amr::initSubcycle() 1 7.988e-06 9.961e-06 1.41e-05 0.00% Gravity::set_mass_offset() 10 8.427e-06 9.871e-06 1.147e-05 0.00% Castro::FluxRegCrseInit 10 7.571e-06 9.269e-06 1.111e-05 0.00% Amr::initialInit() 1 1.136e-06 2.598e-06 9.247e-06 0.00% Castro::post_regrid() 1 2.616e-06 4.63e-06 9.106e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.613e-06 4.936e-06 7.054e-06 0.00% Castro::retry_advance_ctu() 10 5.045e-06 5.953e-06 7.016e-06 0.00% Amr::InitializeInit() 1 1.945e-06 3.145e-06 6.851e-06 0.00% Castro::computeInitialDt() 2 3.929e-06 4.452e-06 5.398e-06 0.00% Castro::FluxRegFineAdd() 10 1.762e-06 2.489e-06 3.254e-06 0.00% Amr::init() 1 1.785e-06 2.211e-06 2.983e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.152e-06 1.519e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.61 3.612 3.613 100.00% Amr::coarseTimeStep() 10 3.347 3.347 3.347 92.64% Amr::timeStep() 10 3.336 3.337 3.338 92.38% Castro::advance() 10 3.321 3.321 3.321 91.93% Castro::subcycle_advance_ctu() 10 3.246 3.253 3.266 90.41% Castro::do_advance_ctu() 10 3.246 3.253 3.266 90.40% Castro::construct_ctu_hydro_source() 10 2.125 2.32 2.41 66.70% Gravity::make_radial_gravity() 21 0.3555 0.3682 0.3922 10.85% Amr::init() 1 0.2481 0.2482 0.2483 6.87% Gravity::get_new_grav_vector() 11 0.239 0.2425 0.2444 6.76% Castro::construct_old_gravity() 10 0.2055 0.2152 0.2331 6.45% Amr::initialInit() 1 0.2312 0.2319 0.2325 6.43% Gravity::get_old_grav_vector() 10 0.2046 0.2144 0.2325 6.43% FillPatchIterator::Initialize 41 0.1783 0.1878 0.2181 6.04% Castro::construct_new_gravity() 10 0.2031 0.2048 0.206 5.70% FillPatchSingleLevel 41 0.1261 0.1429 0.193 5.34% Amr::InitializeInit() 1 0.05605 0.1096 0.19 5.26% Amr::defBaseLevel() 1 0.05605 0.1096 0.19 5.26% Castro::initialize_do_advance() 10 0.1623 0.1705 0.1756 4.86% Amr::FinalizeInit() 1 0.04247 0.1223 0.1751 4.85% Castro::initData() 1 0.04177 0.09404 0.1704 4.72% Castro::estTimeStep() 21 0.02562 0.1089 0.1597 4.42% FabArray::ParallelCopy() 41 0.08394 0.1008 0.155 4.29% Castro::computeInitialDt() 2 0.00256 0.08313 0.1367 3.78% Castro::expand_state() 10 0.1174 0.1227 0.1299 3.60% FabArray::ParallelCopy_finish() 41 0.03785 0.05852 0.1285 3.56% Castro::clean_state() 62 0.1116 0.118 0.1233 3.41% Castro::initialize_advance() 10 0.05403 0.06822 0.0747 2.07% Castro::computeTemp() 63 0.06475 0.0699 0.07456 2.06% FabArray::setVal() 143 0.05495 0.06755 0.07166 1.98% Castro::do_new_sources() 10 0.05469 0.0635 0.06552 1.81% Castro::reset_internal_energy(MultiFab) 63 0.04712 0.05062 0.05373 1.49% Castro::reset_internal_energy(Fab) 1008 0.04682 0.05031 0.05339 1.48% Castro::do_old_sources() 10 0.03273 0.04586 0.04998 1.38% FabArray::ParallelCopy_nowait() 41 0.0264 0.04222 0.04767 1.32% StateDataPhysBCFunct::() 41 0.03796 0.04207 0.04551 1.26% StateData::FillBoundary(geom) 41 0.03785 0.04194 0.04539 1.26% Castro::normalize_species() 62 0.04039 0.04213 0.04342 1.20% Castro::post_init() 1 0.03811 0.03854 0.03903 1.08% Castro::construct_new_source() 50 0.02629 0.03033 0.03267 0.90% Gravity::interpolate_monopole_grav() 21 0.02691 0.02777 0.0289 0.80% Amr::writePlotFile() 2 0.02634 0.02709 0.02787 0.77% Castro::construct_new_gravity_source() 10 0.02136 0.02392 0.0258 0.71% VisMF::Write(FabArray) 2 0.01121 0.01274 0.01689 0.47% Castro::post_timestep() 10 0.01519 0.01586 0.01625 0.45% Castro::apply_source_to_state() 20 0.008713 0.01408 0.01604 0.44% MultiFab::Saxpy() 20 0.008673 0.01403 0.01599 0.44% FabArray::setDomainBndry() 41 0.005073 0.01194 0.01512 0.42% Castro::Castro() 1 0.009316 0.01023 0.01281 0.35% Castro::check_for_nan() 20 0.00981 0.01118 0.0122 0.34% MultiFab::contains_nan() 20 0.009786 0.01116 0.01217 0.34% Castro::construct_old_source() 50 0.005098 0.01023 0.01199 0.33% Castro::construct_old_gravity_source() 10 0.005058 0.01015 0.0119 0.33% Castro::computeNewDt() 9 0.007034 0.007863 0.00926 0.26% Castro::initMFs() 1 0.005433 0.006367 0.009062 0.25% Castro::enforce_min_density() 62 0.006178 0.006868 0.007259 0.20% AmrLevel::AmrLevel(dm) 1 0.00456 0.00513 0.006763 0.19% StateData::define() 4 0.004547 0.005115 0.006742 0.19% Castro::swap_state_time_levels() 10 0.002635 0.003976 0.005481 0.15% Castro::post_regrid() 1 0.00159 0.001985 0.002858 0.08% Castro::buildMetrics() 1 0.001429 0.001613 0.002137 0.06% Castro::finalize_do_advance() 10 0.0005441 0.001156 0.001393 0.04% Amr::InitAmr() 1 0.0002684 0.0003334 0.0004631 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.469e-05 0.0001565 0.000224 0.01% DistributionMapping::LeastUsedCPUs() 1 8.918e-06 0.0001504 0.0002161 0.01% Castro::enforce_consistent_e() 1 7.951e-05 0.0001024 0.0001509 0.00% FabArrayBase::getCPC() 41 7.453e-05 8.218e-05 9.235e-05 0.00% Castro::finalize_advance() 10 5.896e-05 6.299e-05 7.045e-05 0.00% Amr::writeSmallPlotFile() 1 2.95e-05 4.789e-05 6.09e-05 0.00% FabArrayBase::CPC::define() 2 2.231e-05 2.952e-05 4.187e-05 0.00% Castro::enforce_speed_limit() 62 2.796e-05 3.081e-05 3.466e-05 0.00% Castro::create_source_corrector() 10 6.51e-06 1.21e-05 2.138e-05 0.00% Gravity::swapTimeLevels() 10 6.818e-06 1.311e-05 1.676e-05 0.00% Amr::initSubcycle() 1 7.988e-06 9.961e-06 1.41e-05 0.00% Gravity::set_mass_offset() 10 8.427e-06 9.871e-06 1.147e-05 0.00% Castro::FluxRegCrseInit 10 7.571e-06 9.269e-06 1.111e-05 0.00% Castro::retry_advance_ctu() 10 5.045e-06 5.953e-06 7.016e-06 0.00% Castro::FluxRegFineAdd() 10 1.762e-06 2.489e-06 3.254e-06 0.00% DistributionMapping::Distribute() 1 9.08e-07 1.152e-06 1.519e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-10-g0b485513b4de) finalized