MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-16-g9473062293af) initialized Starting run at 05:38:36 UTC on 2022-05-16. Successfully read inputs file ... Castro git describe: 22.05-18-g847c0dc94 AMReX git describe: 22.05-16-g947306229 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014233385 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356806026 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.336892349 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.335139456 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.336275332 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.335890861 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342139435 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.332548345 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.331915183 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.331459419 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.333963815 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01005714 seconds Ending run at 05:38:40 UTC on 2022-05-16. Run time = 3.567858303 Run time without initialization = 3.388271995 Average number of zones advanced per microsecond: 0.774 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.566 ... 3.567 ... 3.568 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0314 2.3378 2.4517 68.72% Castro::do_advance_ctu() 10 0.0365 0.152 0.4616 12.94% Gravity::make_radial_gravity() 21 0.3414 0.3576 0.3851 10.79% FabArray::ParallelCopy_finish() 41 0.03087 0.05554 0.1251 3.51% Castro::initData() 1 0.06492 0.08549 0.1167 3.27% Castro::estTimeStep() 21 0.01988 0.05429 0.09079 2.54% FabArray::setVal() 143 0.05042 0.06727 0.07217 2.02% Castro::reset_internal_energy(Fab) 1008 0.0463 0.04995 0.05179 1.45% FabArray::ParallelCopy_nowait() 41 0.02618 0.04309 0.04855 1.36% StateData::FillBoundary(geom) 41 0.03637 0.04289 0.04707 1.32% Castro::normalize_species() 62 0.04014 0.04195 0.04368 1.22% FillPatchIterator::Initialize 41 0.01999 0.03217 0.03706 1.04% Gravity::interpolate_monopole_grav() 21 0.02597 0.02751 0.0282 0.79% Castro::construct_new_gravity_source() 10 0.01782 0.02287 0.02452 0.69% Castro::expand_state() 10 0.009547 0.01871 0.022 0.62% Castro::computeTemp() 63 0.01709 0.01908 0.0201 0.56% Castro::initialize_do_advance() 10 0.008786 0.01626 0.01844 0.52% VisMF::Write(FabArray) 2 0.01158 0.01247 0.01644 0.46% MultiFab::Saxpy() 20 0.008689 0.01442 0.0163 0.46% FabArray::setDomainBndry() 41 0.004967 0.01178 0.01504 0.42% Gravity::get_new_grav_vector() 11 0.008199 0.01144 0.013 0.36% Amr::writePlotFile() 2 0.008085 0.01181 0.01298 0.36% MultiFab::contains_nan() 20 0.009543 0.01122 0.01269 0.36% Castro::construct_old_gravity_source() 10 0.004899 0.01006 0.01176 0.33% Gravity::get_old_grav_vector() 10 0.005704 0.009644 0.01099 0.31% Castro::initialize_advance() 10 0.006744 0.01017 0.01082 0.30% Castro::initMFs() 1 0.005443 0.006464 0.008462 0.24% Castro::enforce_min_density() 62 0.005926 0.007 0.008433 0.24% Castro::construct_new_source() 50 0.004883 0.006488 0.007021 0.20% StateData::define() 4 0.004476 0.005246 0.006524 0.18% main() 1 0.003262 0.005059 0.005572 0.16% Castro::swap_state_time_levels() 10 0.002837 0.003674 0.00422 0.12% Amr::coarseTimeStep() 10 0.0004071 0.0007173 0.00193 0.05% Castro::buildMetrics() 1 0.001282 0.001496 0.001913 0.05% Castro::finalize_do_advance() 10 0.0005385 0.0009708 0.001124 0.03% Amr::InitAmr() 1 0.0002583 0.0003341 0.0005868 0.02% Amr::timeStep() 10 0.0001625 0.0002236 0.0004908 0.01% DistributionMapping::LeastUsedCPUs() 1 8.926e-06 0.0003137 0.0004067 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002981 0.0003178 0.0003571 0.01% Castro::clean_state() 62 0.0001544 0.0001707 0.0002066 0.01% StateDataPhysBCFunct::() 41 0.0001291 0.0001546 0.0001818 0.01% Castro::enforce_consistent_e() 1 8.16e-05 0.0001059 0.0001507 0.00% Castro::construct_old_source() 50 3.717e-05 7.748e-05 9.728e-05 0.00% Castro::do_new_sources() 10 4.184e-05 6.977e-05 9.06e-05 0.00% FabArray::ParallelCopy() 41 6.047e-05 7.089e-05 8.763e-05 0.00% FillPatchSingleLevel 41 6.834e-05 7.264e-05 8.377e-05 0.00% Castro::do_old_sources() 10 4.106e-05 6.846e-05 8.37e-05 0.00% Castro::Castro() 1 4.863e-05 5.946e-05 8.201e-05 0.00% Amr::FinalizeInit() 1 3.588e-06 1.372e-05 7.724e-05 0.00% Castro::subcycle_advance_ctu() 10 4.543e-05 5.857e-05 7.247e-05 0.00% Amr::writeSmallPlotFile() 1 2.989e-05 5.325e-05 6.798e-05 0.00% Castro::construct_old_gravity() 10 3.771e-05 5.491e-05 6.481e-05 0.00% FabArrayBase::getCPC() 41 4.62e-05 5.452e-05 6.212e-05 0.00% Castro::construct_new_gravity() 10 3.262e-05 4.818e-05 5.88e-05 0.00% Castro::finalize_advance() 10 4.866e-05 5.225e-05 5.594e-05 0.00% Castro::enforce_speed_limit() 62 2.61e-05 3.203e-05 5.528e-05 0.00% Castro::apply_source_to_state() 20 3.879e-05 4.91e-05 5.468e-05 0.00% Castro::advance() 10 2.953e-05 3.916e-05 4.688e-05 0.00% Amr::defBaseLevel() 1 2.721e-05 3.16e-05 3.488e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.475e-05 2.16e-05 3.446e-05 0.00% FabArrayBase::CPC::define() 2 2.132e-05 2.596e-05 2.984e-05 0.00% Castro::check_for_nan() 20 2.264e-05 2.437e-05 2.73e-05 0.00% Castro::computeNewDt() 9 8.14e-06 1.142e-05 2.291e-05 0.00% Gravity::swapTimeLevels() 10 6.456e-06 1.27e-05 1.764e-05 0.00% Amr::initSubcycle() 1 8.376e-06 1.043e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.493e-06 1.141e-05 1.426e-05 0.00% Gravity::set_mass_offset() 10 7.755e-06 1.067e-05 1.416e-05 0.00% Castro::post_init() 1 8.736e-06 1.101e-05 1.409e-05 0.00% Castro::FluxRegCrseInit 10 6.181e-06 9.96e-06 1.261e-05 0.00% Castro::post_timestep() 10 9.045e-06 1.103e-05 1.232e-05 0.00% Amr::InitializeInit() 1 2.146e-06 3.388e-06 9.307e-06 0.00% Castro::retry_advance_ctu() 10 3.921e-06 5.358e-06 6.918e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.888e-06 4.369e-06 5.296e-06 0.00% Castro::computeInitialDt() 2 3.245e-06 4e-06 4.871e-06 0.00% Castro::post_regrid() 1 1.732e-06 2.988e-06 4.733e-06 0.00% Castro::FluxRegFineAdd() 10 1.97e-06 2.376e-06 3.197e-06 0.00% Amr::init() 1 1.79e-06 2.094e-06 2.352e-06 0.00% Amr::initialInit() 1 1.202e-06 1.585e-06 2.036e-06 0.00% DistributionMapping::Distribute() 1 1.024e-06 1.175e-06 1.356e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.566 3.567 3.568 100.00% Amr::coarseTimeStep() 10 3.373 3.373 3.373 94.53% Amr::timeStep() 10 3.363 3.363 3.364 94.29% Castro::advance() 10 3.347 3.347 3.347 93.82% Castro::subcycle_advance_ctu() 10 3.272 3.277 3.293 92.28% Castro::do_advance_ctu() 10 3.272 3.277 3.293 92.28% Castro::construct_ctu_hydro_source() 10 2.031 2.338 2.452 68.72% Gravity::make_radial_gravity() 21 0.3414 0.3576 0.3851 10.79% Castro::construct_old_gravity() 10 0.2055 0.2183 0.2385 6.69% Gravity::get_old_grav_vector() 10 0.2047 0.2175 0.238 6.67% Gravity::get_new_grav_vector() 11 0.2268 0.2293 0.2305 6.46% FillPatchIterator::Initialize 41 0.1741 0.1858 0.2147 6.02% Castro::construct_new_gravity() 10 0.2028 0.2036 0.2052 5.75% FillPatchSingleLevel 41 0.1224 0.1419 0.1897 5.32% Amr::init() 1 0.1788 0.1791 0.1792 5.02% Castro::initialize_do_advance() 10 0.163 0.1682 0.1739 4.87% Amr::initialInit() 1 0.1644 0.1649 0.1653 4.63% FabArray::ParallelCopy() 41 0.07874 0.09878 0.1515 4.25% Amr::InitializeInit() 1 0.08336 0.1054 0.1358 3.81% Amr::defBaseLevel() 1 0.08335 0.1054 0.1358 3.81% Castro::expand_state() 10 0.1136 0.1213 0.1279 3.58% FabArray::ParallelCopy_finish() 41 0.03087 0.05554 0.1251 3.51% Castro::clean_state() 62 0.1095 0.1174 0.1211 3.39% Castro::initData() 1 0.0689 0.08983 0.1205 3.38% Castro::estTimeStep() 21 0.01988 0.05429 0.09079 2.54% Amr::FinalizeInit() 1 0.02929 0.05952 0.08186 2.29% Castro::initialize_advance() 10 0.054 0.06974 0.0749 2.10% FabArray::setVal() 143 0.05042 0.06727 0.07217 2.02% Castro::computeTemp() 63 0.06375 0.06934 0.07157 2.01% Castro::do_new_sources() 10 0.0507 0.06264 0.06601 1.85% Castro::computeInitialDt() 2 0.001814 0.03216 0.05429 1.52% Castro::reset_internal_energy(MultiFab) 63 0.04666 0.05027 0.05211 1.46% Castro::reset_internal_energy(Fab) 1008 0.0463 0.04995 0.05179 1.45% Castro::do_old_sources() 10 0.03289 0.04558 0.04911 1.38% FabArray::ParallelCopy_nowait() 41 0.02628 0.04317 0.04863 1.36% StateDataPhysBCFunct::() 41 0.0365 0.04304 0.04721 1.32% StateData::FillBoundary(geom) 41 0.03637 0.04289 0.04707 1.32% Castro::normalize_species() 62 0.04014 0.04195 0.04368 1.22% Castro::construct_new_source() 50 0.0227 0.02936 0.03152 0.88% Gravity::interpolate_monopole_grav() 21 0.02597 0.02751 0.0282 0.79% Castro::post_init() 1 0.02483 0.02642 0.02712 0.76% Amr::writePlotFile() 2 0.02403 0.02428 0.02462 0.69% Castro::construct_new_gravity_source() 10 0.01782 0.02287 0.02452 0.69% Castro::post_timestep() 10 0.01544 0.01604 0.01681 0.47% VisMF::Write(FabArray) 2 0.01158 0.01247 0.01644 0.46% Castro::apply_source_to_state() 20 0.008727 0.01447 0.01635 0.46% MultiFab::Saxpy() 20 0.008689 0.01442 0.0163 0.46% FabArray::setDomainBndry() 41 0.004967 0.01178 0.01504 0.42% Castro::check_for_nan() 20 0.009568 0.01124 0.01272 0.36% MultiFab::contains_nan() 20 0.009543 0.01122 0.01269 0.36% Castro::Castro() 1 0.008464 0.00998 0.01216 0.34% Castro::construct_old_source() 50 0.004936 0.01014 0.01185 0.33% Castro::construct_old_gravity_source() 10 0.004899 0.01006 0.01176 0.33% Castro::initMFs() 1 0.005443 0.006464 0.008462 0.24% Castro::enforce_min_density() 62 0.005926 0.007 0.008433 0.24% Castro::computeNewDt() 9 0.006807 0.007562 0.008274 0.23% AmrLevel::AmrLevel(dm) 1 0.00449 0.005267 0.006559 0.18% StateData::define() 4 0.004476 0.005246 0.006524 0.18% Castro::swap_state_time_levels() 10 0.002837 0.003674 0.00422 0.12% Castro::post_regrid() 1 0.001525 0.001963 0.003234 0.09% Castro::buildMetrics() 1 0.001391 0.001644 0.002116 0.06% Castro::finalize_do_advance() 10 0.0005385 0.0009708 0.001124 0.03% Amr::InitAmr() 1 0.0002667 0.0003445 0.0006009 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.433e-05 0.0003192 0.0004133 0.01% DistributionMapping::LeastUsedCPUs() 1 8.926e-06 0.0003137 0.0004067 0.01% Castro::enforce_consistent_e() 1 8.16e-05 0.0001059 0.0001507 0.00% FabArrayBase::getCPC() 41 6.909e-05 8.047e-05 9.196e-05 0.00% Castro::finalize_advance() 10 5.969e-05 6.459e-05 6.898e-05 0.00% Amr::writeSmallPlotFile() 1 2.989e-05 5.325e-05 6.798e-05 0.00% Castro::enforce_speed_limit() 62 2.61e-05 3.203e-05 5.528e-05 0.00% FabArrayBase::CPC::define() 2 2.132e-05 2.596e-05 2.984e-05 0.00% Gravity::swapTimeLevels() 10 6.456e-06 1.27e-05 1.764e-05 0.00% Amr::initSubcycle() 1 8.376e-06 1.043e-05 1.523e-05 0.00% Castro::create_source_corrector() 10 6.493e-06 1.141e-05 1.426e-05 0.00% Gravity::set_mass_offset() 10 7.755e-06 1.067e-05 1.416e-05 0.00% Castro::FluxRegCrseInit 10 6.181e-06 9.96e-06 1.261e-05 0.00% Castro::retry_advance_ctu() 10 3.921e-06 5.358e-06 6.918e-06 0.00% Castro::FluxRegFineAdd() 10 1.97e-06 2.376e-06 3.197e-06 0.00% DistributionMapping::Distribute() 1 1.024e-06 1.175e-06 1.356e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-16-g9473062293af) finalized