MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-24-g994073b931f1) initialized Starting run at 17:06:27 UTC on 2022-05-18. Successfully read inputs file ... Castro git describe: 22.05-24-gc58d396c2 AMReX git describe: 22.05-24-g994073b93 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01320118 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.383773853 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.337692896 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336441209 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337703813 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.347459927 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343021913 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330581856 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.333637799 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.332567678 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.331993528 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009855241 seconds Ending run at 17:06:31 UTC on 2022-05-18. Run time = 3.603003713 Run time without initialization = 3.4302042 Average number of zones advanced per microsecond: 0.764 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.601 ... 3.603 ... 3.603 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0341 2.3431 2.4512 68.03% Castro::do_advance_ctu() 10 0.07007 0.1789 0.4915 13.64% Gravity::make_radial_gravity() 21 0.3338 0.3502 0.3788 10.51% FabArray::ParallelCopy_finish() 41 0.0405 0.06025 0.117 3.25% Castro::initData() 1 0.03966 0.07762 0.1133 3.15% Castro::estTimeStep() 21 0.02893 0.06543 0.1029 2.86% FabArray::setVal() 143 0.06373 0.0716 0.07424 2.06% Castro::reset_internal_energy(Fab) 1008 0.04587 0.04931 0.05057 1.40% FabArray::ParallelCopy_nowait() 41 0.02747 0.04343 0.04895 1.36% StateData::FillBoundary(geom) 41 0.03376 0.04174 0.0462 1.28% Castro::normalize_species() 62 0.04061 0.04155 0.04218 1.17% FillPatchIterator::Initialize 41 0.01945 0.03235 0.0376 1.04% Gravity::interpolate_monopole_grav() 21 0.02561 0.02758 0.02859 0.79% Castro::construct_new_gravity_source() 10 0.02215 0.02394 0.02506 0.70% Castro::expand_state() 10 0.009407 0.01874 0.02167 0.60% Castro::computeTemp() 63 0.01745 0.01883 0.01967 0.55% Castro::initialize_do_advance() 10 0.008364 0.01657 0.01839 0.51% MultiFab::Saxpy() 20 0.0116 0.01499 0.01617 0.45% FabArray::setDomainBndry() 41 0.006208 0.01212 0.0151 0.42% VisMF::Write(FabArray) 2 0.01052 0.01133 0.01502 0.42% Gravity::get_new_grav_vector() 11 0.009145 0.01171 0.01306 0.36% Amr::writePlotFile() 2 0.008267 0.01185 0.01265 0.35% MultiFab::contains_nan() 20 0.01008 0.01098 0.01227 0.34% Castro::construct_old_gravity_source() 10 0.005418 0.01049 0.01212 0.34% Gravity::get_old_grav_vector() 10 0.005864 0.009707 0.01108 0.31% Castro::initialize_advance() 10 0.01031 0.01059 0.01075 0.30% Castro::construct_new_source() 50 0.004907 0.006463 0.007152 0.20% Castro::enforce_min_density() 62 0.006167 0.006722 0.007137 0.20% Castro::initMFs() 1 0.005316 0.00557 0.007112 0.20% main() 1 0.003562 0.004984 0.005374 0.15% StateData::define() 4 0.004442 0.004593 0.005052 0.14% Castro::swap_state_time_levels() 10 0.003784 0.003931 0.003982 0.11% Amr::coarseTimeStep() 10 0.0004337 0.0006888 0.001581 0.04% Castro::buildMetrics() 1 0.001288 0.001332 0.001468 0.04% Castro::finalize_do_advance() 10 0.0005178 0.00103 0.001165 0.03% Amr::timeStep() 10 0.000179 0.0002429 0.0005187 0.01% Amr::InitAmr() 1 0.0002441 0.0002746 0.0004228 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002793 0.0002975 0.0003247 0.01% DistributionMapping::LeastUsedCPUs() 1 7.623e-06 0.0001649 0.0001994 0.01% Castro::clean_state() 62 0.0001512 0.0001656 0.0001826 0.01% StateDataPhysBCFunct::() 41 0.0001173 0.0001435 0.0001782 0.00% Castro::enforce_consistent_e() 1 8.188e-05 8.798e-05 0.0001073 0.00% Amr::FinalizeInit() 1 3.952e-06 1.646e-05 9.846e-05 0.00% FabArray::ParallelCopy() 41 6.683e-05 7.91e-05 9.591e-05 0.00% Castro::Castro() 1 5.284e-05 7.149e-05 9.542e-05 0.00% Castro::construct_old_source() 50 4.6e-05 7.535e-05 8.64e-05 0.00% FillPatchSingleLevel 41 6.271e-05 7.321e-05 8.261e-05 0.00% Castro::do_old_sources() 10 4.347e-05 6.986e-05 8.227e-05 0.00% Castro::do_new_sources() 10 4.459e-05 6.593e-05 8.225e-05 0.00% Amr::writeSmallPlotFile() 1 3.041e-05 6.06e-05 6.989e-05 0.00% Castro::construct_old_gravity() 10 4.162e-05 5.562e-05 6.787e-05 0.00% FabArrayBase::getCPC() 41 4.503e-05 5.3e-05 6.63e-05 0.00% Castro::construct_new_gravity() 10 4.198e-05 5.102e-05 6.549e-05 0.00% Castro::apply_source_to_state() 20 3.588e-05 4.861e-05 5.98e-05 0.00% Castro::subcycle_advance_ctu() 10 4.435e-05 5.14e-05 5.832e-05 0.00% Castro::finalize_advance() 10 5.08e-05 5.214e-05 5.464e-05 0.00% Amr::defBaseLevel() 1 2.789e-05 3.78e-05 4.955e-05 0.00% Castro::advance() 10 3.533e-05 4.137e-05 4.486e-05 0.00% Castro::enforce_speed_limit() 62 2.322e-05 3.126e-05 3.535e-05 0.00% FabArrayBase::CPC::define() 2 2.232e-05 2.739e-05 3.107e-05 0.00% Castro::check_for_nan() 20 1.851e-05 2.451e-05 2.887e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.109e-05 1.956e-05 2.635e-05 0.00% Castro::post_timestep() 10 9.382e-06 1.348e-05 2.036e-05 0.00% Gravity::swapTimeLevels() 10 9.005e-06 1.339e-05 1.643e-05 0.00% Castro::post_init() 1 8.212e-06 1.006e-05 1.33e-05 0.00% Gravity::set_mass_offset() 10 6.08e-06 1.007e-05 1.303e-05 0.00% Castro::FluxRegCrseInit 10 5.863e-06 9.518e-06 1.271e-05 0.00% Castro::create_source_corrector() 10 8.033e-06 1.11e-05 1.262e-05 0.00% Amr::initSubcycle() 1 8.175e-06 8.9e-06 1.135e-05 0.00% Castro::computeNewDt() 9 7.031e-06 9.399e-06 1.085e-05 0.00% Amr::InitializeInit() 1 1.912e-06 2.842e-06 7.205e-06 0.00% Castro::retry_advance_ctu() 10 3.888e-06 5.515e-06 6.83e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.501e-06 4.309e-06 5.799e-06 0.00% Castro::computeInitialDt() 2 2.817e-06 3.653e-06 4.487e-06 0.00% Castro::post_regrid() 1 2.161e-06 2.809e-06 3.561e-06 0.00% Castro::FluxRegFineAdd() 10 1.783e-06 2.285e-06 2.712e-06 0.00% Amr::init() 1 1.727e-06 2.132e-06 2.373e-06 0.00% Amr::initialInit() 1 1.117e-06 1.385e-06 1.735e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.052e-06 1.285e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.601 3.603 3.603 100.00% Amr::coarseTimeStep() 10 3.415 3.415 3.415 94.78% Amr::timeStep() 10 3.405 3.406 3.406 94.54% Castro::advance() 10 3.389 3.39 3.39 94.08% Castro::subcycle_advance_ctu() 10 3.315 3.317 3.321 92.19% Castro::do_advance_ctu() 10 3.315 3.317 3.321 92.18% Castro::construct_ctu_hydro_source() 10 2.034 2.343 2.451 68.03% Gravity::make_radial_gravity() 21 0.3338 0.3502 0.3788 10.51% Castro::construct_old_gravity() 10 0.1971 0.211 0.2336 6.48% Gravity::get_old_grav_vector() 10 0.1961 0.2101 0.2326 6.46% Gravity::get_new_grav_vector() 11 0.2304 0.2311 0.2321 6.44% Castro::construct_new_gravity() 10 0.2063 0.207 0.2077 5.76% FillPatchIterator::Initialize 41 0.1823 0.1903 0.2043 5.67% Castro::initialize_do_advance() 10 0.1522 0.1711 0.1805 5.01% FillPatchSingleLevel 41 0.1305 0.1458 0.1786 4.96% Amr::init() 1 0.1722 0.1724 0.1724 4.79% Amr::initialInit() 1 0.1589 0.1591 0.1593 4.42% FabArray::ParallelCopy() 41 0.08855 0.1038 0.1446 4.01% Amr::InitializeInit() 1 0.05834 0.09618 0.1319 3.66% Amr::defBaseLevel() 1 0.05834 0.09618 0.1319 3.66% Castro::expand_state() 10 0.117 0.1244 0.1315 3.65% Castro::clean_state() 62 0.1097 0.116 0.1186 3.29% Castro::initData() 1 0.0435 0.08167 0.1174 3.26% FabArray::ParallelCopy_finish() 41 0.0405 0.06025 0.117 3.25% Castro::estTimeStep() 21 0.02893 0.06543 0.1029 2.86% Amr::FinalizeInit() 1 0.02702 0.06294 0.1009 2.80% Castro::computeInitialDt() 2 0.001719 0.03743 0.07527 2.09% Castro::initialize_advance() 10 0.06755 0.07267 0.0745 2.07% FabArray::setVal() 143 0.06373 0.0716 0.07424 2.06% Castro::computeTemp() 63 0.06365 0.06844 0.07033 1.95% Castro::do_new_sources() 10 0.05977 0.06446 0.06557 1.82% Castro::reset_internal_energy(MultiFab) 63 0.0462 0.04961 0.05087 1.41% Castro::reset_internal_energy(Fab) 1008 0.04587 0.04931 0.05057 1.40% Castro::do_old_sources() 10 0.03544 0.04632 0.04979 1.38% FabArray::ParallelCopy_nowait() 41 0.02755 0.04351 0.04904 1.36% StateDataPhysBCFunct::() 41 0.03387 0.04189 0.04634 1.29% StateData::FillBoundary(geom) 41 0.03376 0.04174 0.0462 1.28% Castro::normalize_species() 62 0.04061 0.04155 0.04218 1.17% Castro::construct_new_source() 50 0.02705 0.03041 0.0312 0.87% Gravity::interpolate_monopole_grav() 21 0.02561 0.02758 0.02859 0.79% Castro::post_init() 1 0.02462 0.02485 0.0251 0.70% Castro::construct_new_gravity_source() 10 0.02215 0.02394 0.02506 0.70% Amr::writePlotFile() 2 0.02301 0.02318 0.02343 0.65% Castro::apply_source_to_state() 20 0.01164 0.01504 0.01623 0.45% Castro::post_timestep() 10 0.01578 0.01594 0.01617 0.45% MultiFab::Saxpy() 20 0.0116 0.01499 0.01617 0.45% FabArray::setDomainBndry() 41 0.006208 0.01212 0.0151 0.42% VisMF::Write(FabArray) 2 0.01052 0.01133 0.01502 0.42% Castro::check_for_nan() 20 0.01009 0.011 0.0123 0.34% MultiFab::contains_nan() 20 0.01008 0.01098 0.01227 0.34% Castro::construct_old_source() 50 0.005464 0.01056 0.01221 0.34% Castro::construct_old_gravity_source() 10 0.005418 0.01049 0.01212 0.34% Castro::Castro() 1 0.009414 0.009689 0.01059 0.29% Castro::computeNewDt() 9 0.007039 0.007479 0.007784 0.22% Castro::enforce_min_density() 62 0.006167 0.006722 0.007137 0.20% Castro::initMFs() 1 0.005316 0.00557 0.007112 0.20% AmrLevel::AmrLevel(dm) 1 0.004458 0.004613 0.005075 0.14% StateData::define() 4 0.004442 0.004593 0.005052 0.14% Castro::swap_state_time_levels() 10 0.003784 0.003931 0.003982 0.11% Castro::post_regrid() 1 0.001522 0.001586 0.001678 0.05% Castro::buildMetrics() 1 0.00141 0.001462 0.001623 0.05% Castro::finalize_do_advance() 10 0.0005178 0.00103 0.001165 0.03% Amr::InitAmr() 1 0.0002525 0.0002835 0.0004326 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.302e-05 0.0001702 0.0002062 0.01% DistributionMapping::LeastUsedCPUs() 1 7.623e-06 0.0001649 0.0001994 0.01% Castro::enforce_consistent_e() 1 8.188e-05 8.798e-05 0.0001073 0.00% FabArrayBase::getCPC() 41 7.604e-05 8.039e-05 8.925e-05 0.00% Castro::finalize_advance() 10 5.946e-05 6.394e-05 7.005e-05 0.00% Amr::writeSmallPlotFile() 1 3.041e-05 6.06e-05 6.989e-05 0.00% Castro::enforce_speed_limit() 62 2.322e-05 3.126e-05 3.535e-05 0.00% FabArrayBase::CPC::define() 2 2.232e-05 2.739e-05 3.107e-05 0.00% Gravity::swapTimeLevels() 10 9.005e-06 1.339e-05 1.643e-05 0.00% Gravity::set_mass_offset() 10 6.08e-06 1.007e-05 1.303e-05 0.00% Castro::FluxRegCrseInit 10 5.863e-06 9.518e-06 1.271e-05 0.00% Castro::create_source_corrector() 10 8.033e-06 1.11e-05 1.262e-05 0.00% Amr::initSubcycle() 1 8.175e-06 8.9e-06 1.135e-05 0.00% Castro::retry_advance_ctu() 10 3.888e-06 5.515e-06 6.83e-06 0.00% Castro::FluxRegFineAdd() 10 1.783e-06 2.285e-06 2.712e-06 0.00% DistributionMapping::Distribute() 1 9.24e-07 1.052e-06 1.285e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-24-g994073b931f1) finalized