MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-25-g0540fed3576f) initialized Starting run at 14:50:37 UTC on 2022-05-20. Successfully read inputs file ... Castro git describe: 22.05-30-g305936cff AMReX git describe: 22.05-25-g0540fed35 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014266871 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.359317789 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.340304274 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.339257608 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.340107147 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.345760431 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342538045 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330755351 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.330389047 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.330832386 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.330500235 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009668435 seconds Ending run at 14:50:41 UTC on 2022-05-20. Run time = 3.631018174 Run time without initialization = 3.406095096 Average number of zones advanced per microsecond: 0.770 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.629 ... 3.631 ... 3.631 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0675 2.3480 2.4496 67.46% Castro::do_advance_ctu() 10 0.03978 0.1427 0.4286 11.80% Gravity::make_radial_gravity() 21 0.3414 0.3559 0.3734 10.28% Castro::initData() 1 0.03831 0.08832 0.1552 4.27% Castro::estTimeStep() 21 0.02594 0.09873 0.1498 4.13% FabArray::ParallelCopy_finish() 41 0.04186 0.05915 0.1016 2.80% FabArray::setVal() 143 0.06774 0.07153 0.07392 2.04% Castro::reset_internal_energy(Fab) 1008 0.04846 0.05028 0.05324 1.47% FabArray::ParallelCopy_nowait() 41 0.0296 0.04378 0.04951 1.36% StateData::FillBoundary(geom) 41 0.03628 0.04246 0.04685 1.29% Castro::normalize_species() 62 0.04107 0.0419 0.04291 1.18% FillPatchIterator::Initialize 41 0.02074 0.03274 0.03737 1.03% Gravity::interpolate_monopole_grav() 21 0.02668 0.02741 0.02779 0.77% Castro::construct_new_gravity_source() 10 0.02326 0.02429 0.02541 0.70% Castro::expand_state() 10 0.01241 0.02 0.02312 0.64% Castro::computeTemp() 63 0.01732 0.019 0.0205 0.56% Castro::initialize_do_advance() 10 0.01455 0.01769 0.01928 0.53% MultiFab::Saxpy() 20 0.01131 0.0148 0.01678 0.46% FabArray::setDomainBndry() 41 0.006 0.01218 0.01533 0.42% VisMF::Write(FabArray) 2 0.01133 0.01176 0.01425 0.39% Gravity::get_new_grav_vector() 11 0.01031 0.01188 0.01321 0.36% Amr::writePlotFile() 2 0.009892 0.01221 0.01288 0.35% Castro::construct_old_gravity_source() 10 0.00707 0.01079 0.01251 0.34% MultiFab::contains_nan() 20 0.01018 0.01116 0.01231 0.34% Gravity::get_old_grav_vector() 10 0.00667 0.009803 0.0114 0.31% Castro::initialize_advance() 10 0.01062 0.01077 0.01105 0.30% Castro::initMFs() 1 0.005382 0.00638 0.008262 0.23% Castro::construct_new_source() 50 0.005179 0.006507 0.007022 0.19% Castro::enforce_min_density() 62 0.005928 0.006269 0.006762 0.19% StateData::define() 4 0.004457 0.005168 0.006668 0.18% main() 1 0.003604 0.005453 0.006052 0.17% Castro::swap_state_time_levels() 10 0.003035 0.003982 0.004437 0.12% Amr::coarseTimeStep() 10 0.0008208 0.001796 0.002788 0.08% Castro::buildMetrics() 1 0.001254 0.001466 0.001862 0.05% Castro::finalize_do_advance() 10 0.001155 0.001478 0.001646 0.05% Amr::InitAmr() 1 0.0002905 0.0003699 0.000688 0.02% DistributionMapping::LeastUsedCPUs() 1 1.008e-05 0.0004074 0.0005126 0.01% Amr::timeStep() 10 0.0001686 0.0002285 0.0005094 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002953 0.0003115 0.0003421 0.01% Castro::clean_state() 62 0.0001334 0.0001646 0.0001862 0.01% StateDataPhysBCFunct::() 41 0.0001104 0.0001406 0.0001652 0.00% Castro::enforce_consistent_e() 1 7.818e-05 9.716e-05 0.0001358 0.00% Castro::Castro() 1 5.456e-05 6.935e-05 0.000102 0.00% Castro::construct_old_source() 50 3.383e-05 7.659e-05 9.916e-05 0.00% Castro::do_old_sources() 10 3.565e-05 6.46e-05 8.278e-05 0.00% FabArray::ParallelCopy() 41 5.049e-05 7.111e-05 8.193e-05 0.00% Amr::FinalizeInit() 1 4.669e-06 1.438e-05 7.687e-05 0.00% Castro::do_new_sources() 10 4.122e-05 6.389e-05 7.612e-05 0.00% FillPatchSingleLevel 41 5.113e-05 6.854e-05 7.529e-05 0.00% Castro::subcycle_advance_ctu() 10 3.322e-05 5.36e-05 7.304e-05 0.00% Castro::construct_old_gravity() 10 3.061e-05 5.298e-05 6.982e-05 0.00% Castro::advance() 10 2.729e-05 4.614e-05 6.917e-05 0.00% FabArrayBase::getCPC() 41 3.743e-05 5.329e-05 6.378e-05 0.00% Amr::writeSmallPlotFile() 1 3.735e-05 4.9e-05 6.009e-05 0.00% Castro::construct_new_gravity() 10 3.553e-05 4.764e-05 5.79e-05 0.00% Castro::finalize_advance() 10 4.797e-05 5.127e-05 5.616e-05 0.00% Castro::apply_source_to_state() 20 2.92e-05 4.328e-05 4.983e-05 0.00% Amr::defBaseLevel() 1 2.742e-05 3.477e-05 4.423e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.479e-05 2.277e-05 3.943e-05 0.00% Castro::enforce_speed_limit() 62 2.143e-05 2.755e-05 3.286e-05 0.00% FabArrayBase::CPC::define() 2 2.239e-05 2.674e-05 3.231e-05 0.00% Castro::check_for_nan() 20 2.027e-05 2.393e-05 2.857e-05 0.00% Gravity::swapTimeLevels() 10 8.417e-06 1.406e-05 2.386e-05 0.00% Castro::post_timestep() 10 1.044e-05 1.471e-05 1.995e-05 0.00% Amr::initSubcycle() 1 9.103e-06 1.104e-05 1.593e-05 0.00% Castro::create_source_corrector() 10 7.328e-06 1.15e-05 1.585e-05 0.00% Gravity::set_mass_offset() 10 7.588e-06 9.934e-06 1.213e-05 0.00% Castro::computeNewDt() 9 7.872e-06 9.001e-06 1.083e-05 0.00% Castro::FluxRegCrseInit 10 5.973e-06 9.018e-06 1.075e-05 0.00% Amr::InitializeInit() 1 2.126e-06 3.957e-06 1.069e-05 0.00% Amr::init() 1 1.803e-06 2.915e-06 7.936e-06 0.00% Castro::retry_advance_ctu() 10 4.102e-06 5.561e-06 7.674e-06 0.00% Castro::post_init() 1 3.022e-06 4.551e-06 7.667e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.09e-06 5.303e-06 6.701e-06 0.00% Castro::computeInitialDt() 2 3.635e-06 4.702e-06 6.353e-06 0.00% Castro::post_regrid() 1 2.492e-06 3.786e-06 4.962e-06 0.00% Amr::initialInit() 1 1.201e-06 1.733e-06 2.874e-06 0.00% Castro::FluxRegFineAdd() 10 1.832e-06 2.344e-06 2.773e-06 0.00% DistributionMapping::Distribute() 1 1.128e-06 1.466e-06 1.939e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.629 3.631 3.631 100.00% Amr::coarseTimeStep() 10 3.39 3.39 3.39 93.37% Amr::timeStep() 10 3.38 3.381 3.382 93.13% Castro::advance() 10 3.364 3.365 3.365 92.67% Castro::subcycle_advance_ctu() 10 3.289 3.292 3.295 90.75% Castro::do_advance_ctu() 10 3.289 3.292 3.295 90.75% Castro::construct_ctu_hydro_source() 10 2.068 2.348 2.45 67.46% Gravity::make_radial_gravity() 21 0.3414 0.3559 0.3734 10.28% Gravity::get_new_grav_vector() 11 0.2286 0.232 0.2347 6.46% Castro::construct_old_gravity() 10 0.2035 0.2149 0.2286 6.30% Gravity::get_old_grav_vector() 10 0.2025 0.2141 0.2279 6.28% Amr::init() 1 0.2241 0.2244 0.2246 6.18% Amr::initialInit() 1 0.2096 0.2102 0.2106 5.80% Castro::construct_new_gravity() 10 0.2015 0.2049 0.2072 5.71% FillPatchIterator::Initialize 41 0.1832 0.1907 0.1983 5.46% Castro::initialize_do_advance() 10 0.1637 0.1756 0.1832 5.04% Amr::InitializeInit() 1 0.05593 0.108 0.1791 4.93% Amr::defBaseLevel() 1 0.05593 0.108 0.1791 4.93% FillPatchSingleLevel 41 0.1322 0.1458 0.1706 4.70% Castro::initData() 1 0.04219 0.09257 0.1602 4.41% Amr::FinalizeInit() 1 0.03083 0.1022 0.1545 4.26% Castro::estTimeStep() 21 0.02594 0.09873 0.1498 4.13% Castro::expand_state() 10 0.1204 0.1273 0.1333 3.67% FabArray::ParallelCopy() 41 0.09112 0.1031 0.1315 3.62% Castro::computeInitialDt() 2 0.002109 0.07334 0.1256 3.46% Castro::clean_state() 62 0.1129 0.1168 0.122 3.36% FabArray::ParallelCopy_finish() 41 0.04186 0.05915 0.1016 2.80% Castro::initialize_advance() 10 0.06927 0.07306 0.0753 2.07% Castro::computeTemp() 63 0.06634 0.06959 0.07408 2.04% FabArray::setVal() 143 0.06774 0.07153 0.07392 2.04% Castro::do_new_sources() 10 0.06377 0.06496 0.06557 1.81% Castro::reset_internal_energy(MultiFab) 63 0.04876 0.05059 0.05358 1.48% Castro::reset_internal_energy(Fab) 1008 0.04846 0.05028 0.05324 1.47% Castro::do_old_sources() 10 0.03827 0.04685 0.05024 1.38% FabArray::ParallelCopy_nowait() 41 0.02967 0.04386 0.04959 1.37% StateDataPhysBCFunct::() 41 0.03639 0.0426 0.047 1.29% StateData::FillBoundary(geom) 41 0.03628 0.04246 0.04685 1.29% Castro::normalize_species() 62 0.04107 0.0419 0.04291 1.18% Castro::construct_new_source() 50 0.02967 0.0308 0.03238 0.89% Castro::post_init() 1 0.02666 0.02788 0.0284 0.78% Gravity::interpolate_monopole_grav() 21 0.02668 0.02741 0.02779 0.77% Castro::construct_new_gravity_source() 10 0.02326 0.02429 0.02541 0.70% Amr::writePlotFile() 2 0.02366 0.02396 0.02424 0.67% Castro::apply_source_to_state() 20 0.01134 0.01484 0.01683 0.46% MultiFab::Saxpy() 20 0.01131 0.0148 0.01678 0.46% Castro::post_timestep() 10 0.01456 0.01557 0.0165 0.45% FabArray::setDomainBndry() 41 0.006 0.01218 0.01533 0.42% VisMF::Write(FabArray) 2 0.01133 0.01176 0.01425 0.39% Castro::construct_old_source() 50 0.007104 0.01086 0.01259 0.35% Castro::construct_old_gravity_source() 10 0.00707 0.01079 0.01251 0.34% Castro::check_for_nan() 20 0.0102 0.01118 0.01233 0.34% MultiFab::contains_nan() 20 0.01018 0.01116 0.01231 0.34% Castro::Castro() 1 0.008703 0.009836 0.01188 0.33% Castro::initMFs() 1 0.005382 0.00638 0.008262 0.23% Castro::computeNewDt() 9 0.007028 0.007039 0.007046 0.19% Castro::enforce_min_density() 62 0.005928 0.006269 0.006762 0.19% AmrLevel::AmrLevel(dm) 1 0.004472 0.005191 0.006708 0.18% StateData::define() 4 0.004457 0.005168 0.006668 0.18% Castro::swap_state_time_levels() 10 0.003035 0.003982 0.004437 0.12% Castro::post_regrid() 1 0.001568 0.001962 0.002926 0.08% Castro::buildMetrics() 1 0.001366 0.001608 0.002061 0.06% Castro::finalize_do_advance() 10 0.001155 0.001478 0.001646 0.05% Amr::InitAmr() 1 0.0003 0.000381 0.000704 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.691e-05 0.0004142 0.0005198 0.01% DistributionMapping::LeastUsedCPUs() 1 1.008e-05 0.0004074 0.0005126 0.01% Castro::enforce_consistent_e() 1 7.818e-05 9.716e-05 0.0001358 0.00% FabArrayBase::getCPC() 41 6.311e-05 8.004e-05 8.96e-05 0.00% Castro::finalize_advance() 10 5.577e-05 6.263e-05 6.913e-05 0.00% Amr::writeSmallPlotFile() 1 3.735e-05 4.9e-05 6.009e-05 0.00% Castro::enforce_speed_limit() 62 2.143e-05 2.755e-05 3.286e-05 0.00% FabArrayBase::CPC::define() 2 2.239e-05 2.674e-05 3.231e-05 0.00% Gravity::swapTimeLevels() 10 8.417e-06 1.406e-05 2.386e-05 0.00% Amr::initSubcycle() 1 9.103e-06 1.104e-05 1.593e-05 0.00% Castro::create_source_corrector() 10 7.328e-06 1.15e-05 1.585e-05 0.00% Gravity::set_mass_offset() 10 7.588e-06 9.934e-06 1.213e-05 0.00% Castro::FluxRegCrseInit 10 5.973e-06 9.018e-06 1.075e-05 0.00% Castro::retry_advance_ctu() 10 4.102e-06 5.561e-06 7.674e-06 0.00% Castro::FluxRegFineAdd() 10 1.832e-06 2.344e-06 2.773e-06 0.00% DistributionMapping::Distribute() 1 1.128e-06 1.466e-06 1.939e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-25-g0540fed3576f) finalized