MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-25-g0540fed3576f) initialized Starting run at 15:29:56 UTC on 2022-05-20. Successfully read inputs file ... Castro git describe: 22.05-39-g15a8ac221 AMReX git describe: 22.05-25-g0540fed35 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013843336 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.376992973 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.346501627 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.342117202 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.340762136 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.347883723 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.341231142 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.327145972 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.326861943 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.328787983 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.32878375 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010835598 seconds Ending run at 15:30:00 UTC on 2022-05-20. Run time = 3.612370628 Run time without initialization = 3.423632451 Average number of zones advanced per microsecond: 0.766 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.609 ... 3.612 ... 3.612 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1349 2.3561 2.4666 68.28% Gravity::make_radial_gravity() 21 0.3557 0.3672 0.3957 10.95% Castro::do_advance_ctu() 10 0.0358 0.1447 0.3666 10.15% Castro::initData() 1 0.03818 0.07949 0.1216 3.37% FabArray::ParallelCopy_finish() 41 0.04174 0.05947 0.1183 3.28% Castro::estTimeStep() 21 0.02799 0.07439 0.1163 3.22% FabArray::setVal() 143 0.05837 0.07002 0.07335 2.03% Castro::reset_internal_energy(Fab) 1008 0.04952 0.05042 0.05148 1.43% FabArray::ParallelCopy_nowait() 41 0.02681 0.04313 0.04836 1.34% StateData::FillBoundary(geom) 41 0.0357 0.0418 0.04586 1.27% Castro::normalize_species() 62 0.04115 0.04175 0.04264 1.18% FillPatchIterator::Initialize 41 0.02067 0.0327 0.03707 1.03% Gravity::interpolate_monopole_grav() 21 0.02693 0.0276 0.02781 0.77% Castro::construct_new_gravity_source() 10 0.02066 0.02386 0.02578 0.71% Castro::expand_state() 10 0.009764 0.01934 0.02263 0.63% Castro::computeTemp() 63 0.01857 0.01927 0.01951 0.54% Castro::initialize_do_advance() 10 0.008948 0.01674 0.01859 0.51% VisMF::Write(FabArray) 2 0.01199 0.01285 0.01679 0.46% MultiFab::Saxpy() 20 0.00874 0.01435 0.01625 0.45% FabArray::setDomainBndry() 41 0.005179 0.01184 0.01513 0.42% Amr::writePlotFile() 2 0.008101 0.012 0.01284 0.36% Gravity::get_new_grav_vector() 11 0.007358 0.01128 0.01259 0.35% MultiFab::contains_nan() 20 0.009683 0.01103 0.01227 0.34% Castro::construct_old_gravity_source() 10 0.005005 0.01023 0.01181 0.33% Gravity::get_old_grav_vector() 10 0.005814 0.009624 0.01131 0.31% Castro::initialize_advance() 10 0.006296 0.01014 0.01084 0.30% Castro::initMFs() 1 0.005409 0.006393 0.008444 0.23% Castro::enforce_min_density() 62 0.006141 0.006746 0.007073 0.20% Castro::construct_new_source() 50 0.004892 0.006464 0.007061 0.20% main() 1 0.004038 0.006123 0.006954 0.19% StateData::define() 4 0.0045 0.005154 0.006578 0.18% Castro::swap_state_time_levels() 10 0.002876 0.00366 0.003937 0.11% Castro::buildMetrics() 1 0.001267 0.001477 0.001895 0.05% Amr::coarseTimeStep() 10 0.0004283 0.0006254 0.001495 0.04% Castro::finalize_do_advance() 10 0.0005415 0.001168 0.001376 0.04% Amr::timeStep() 10 0.0001592 0.0002216 0.0004971 0.01% Amr::InitAmr() 1 0.0002722 0.0003409 0.0004633 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002836 0.0003006 0.0003285 0.01% DistributionMapping::LeastUsedCPUs() 1 7.106e-06 0.000151 0.0002218 0.01% Castro::clean_state() 62 0.0001618 0.0001802 0.0002021 0.01% StateDataPhysBCFunct::() 41 0.0001184 0.0001387 0.0001557 0.00% Castro::construct_old_source() 50 4.006e-05 7.909e-05 0.0001113 0.00% Amr::FinalizeInit() 1 3.657e-06 1.907e-05 0.0001098 0.00% Castro::enforce_consistent_e() 1 7.929e-05 8.623e-05 9.457e-05 0.00% FabArray::ParallelCopy() 41 5.206e-05 6.903e-05 8.257e-05 0.00% FillPatchSingleLevel 41 6.052e-05 6.873e-05 7.881e-05 0.00% Castro::do_old_sources() 10 3.893e-05 6.514e-05 7.578e-05 0.00% Castro::do_new_sources() 10 4.282e-05 6.344e-05 7.084e-05 0.00% Castro::subcycle_advance_ctu() 10 4.953e-05 5.991e-05 6.824e-05 0.00% Castro::advance() 10 3.327e-05 4.317e-05 6.696e-05 0.00% Castro::Castro() 1 5.059e-05 5.684e-05 6.623e-05 0.00% Castro::construct_old_gravity() 10 3.773e-05 5.565e-05 6.59e-05 0.00% FabArrayBase::getCPC() 41 5.073e-05 5.676e-05 6.229e-05 0.00% Amr::writeSmallPlotFile() 1 2.466e-05 4.49e-05 5.78e-05 0.00% Castro::apply_source_to_state() 20 4.035e-05 4.858e-05 5.755e-05 0.00% Castro::finalize_advance() 10 4.82e-05 5.054e-05 5.33e-05 0.00% Castro::construct_new_gravity() 10 3.752e-05 4.511e-05 4.892e-05 0.00% Amr::defBaseLevel() 1 2.669e-05 3.21e-05 3.49e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.666e-05 3.292e-05 0.00% Castro::enforce_speed_limit() 62 2.515e-05 2.901e-05 3.248e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.431e-05 2.084e-05 2.798e-05 0.00% Castro::check_for_nan() 20 1.954e-05 2.361e-05 2.665e-05 0.00% Castro::post_timestep() 10 9.379e-06 1.148e-05 1.59e-05 0.00% Gravity::swapTimeLevels() 10 6.696e-06 1.257e-05 1.54e-05 0.00% Castro::post_init() 1 9.174e-06 1.147e-05 1.478e-05 0.00% Amr::initSubcycle() 1 8.127e-06 1.015e-05 1.401e-05 0.00% Castro::create_source_corrector() 10 7.344e-06 1.05e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 7.73e-06 1.025e-05 1.257e-05 0.00% Castro::computeNewDt() 9 7.202e-06 9.684e-06 1.179e-05 0.00% Castro::FluxRegCrseInit 10 6.894e-06 9.531e-06 1.127e-05 0.00% Castro::retry_advance_ctu() 10 4.372e-06 5.844e-06 7.028e-06 0.00% Amr::InitializeInit() 1 2.083e-06 2.894e-06 6.558e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.704e-06 4.801e-06 5.819e-06 0.00% Castro::computeInitialDt() 2 3.06e-06 4.206e-06 5.738e-06 0.00% Castro::post_regrid() 1 1.88e-06 3.98e-06 5.608e-06 0.00% Amr::init() 1 1.682e-06 2.087e-06 2.324e-06 0.00% Castro::FluxRegFineAdd() 10 1.861e-06 2.088e-06 2.295e-06 0.00% Amr::initialInit() 1 1.13e-06 1.532e-06 2.052e-06 0.00% DistributionMapping::Distribute() 1 1.043e-06 1.164e-06 1.388e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.609 3.612 3.612 100.00% Amr::coarseTimeStep() 10 3.406 3.406 3.406 94.28% Amr::timeStep() 10 3.396 3.396 3.397 94.04% Castro::advance() 10 3.379 3.38 3.38 93.57% Castro::subcycle_advance_ctu() 10 3.306 3.308 3.316 91.80% Castro::do_advance_ctu() 10 3.306 3.308 3.316 91.80% Castro::construct_ctu_hydro_source() 10 2.135 2.356 2.467 68.28% Gravity::make_radial_gravity() 21 0.3557 0.3672 0.3957 10.95% Castro::construct_old_gravity() 10 0.2096 0.22 0.2419 6.70% Gravity::get_old_grav_vector() 10 0.2087 0.2191 0.2414 6.68% Gravity::get_new_grav_vector() 11 0.2315 0.2363 0.2375 6.57% Castro::construct_new_gravity() 10 0.2054 0.2094 0.2103 5.82% FillPatchIterator::Initialize 41 0.1835 0.1893 0.2095 5.80% Amr::init() 1 0.1881 0.1883 0.1883 5.21% FillPatchSingleLevel 41 0.1323 0.1448 0.1836 5.08% Castro::initialize_do_advance() 10 0.1616 0.1736 0.1801 4.99% Amr::initialInit() 1 0.1739 0.1743 0.1745 4.83% FabArray::ParallelCopy() 41 0.08934 0.1028 0.1453 4.02% Amr::InitializeInit() 1 0.05677 0.09859 0.1441 3.99% Amr::defBaseLevel() 1 0.05676 0.09859 0.1441 3.99% Castro::expand_state() 10 0.117 0.126 0.1311 3.63% Castro::initData() 1 0.04171 0.08331 0.1253 3.47% Castro::clean_state() 62 0.1155 0.1178 0.1198 3.32% FabArray::ParallelCopy_finish() 41 0.04174 0.05947 0.1183 3.28% Amr::FinalizeInit() 1 0.03021 0.07572 0.1177 3.26% Castro::estTimeStep() 21 0.02799 0.07439 0.1163 3.22% Castro::computeInitialDt() 2 0.001728 0.0474 0.08929 2.47% Castro::initialize_advance() 10 0.06306 0.07161 0.07429 2.06% FabArray::setVal() 143 0.05837 0.07002 0.07335 2.03% Castro::computeTemp() 63 0.06842 0.06999 0.0713 1.97% Castro::do_new_sources() 10 0.05429 0.06396 0.06633 1.84% Castro::reset_internal_energy(MultiFab) 63 0.04985 0.05072 0.05179 1.43% Castro::reset_internal_energy(Fab) 1008 0.04952 0.05042 0.05148 1.43% Castro::do_old_sources() 10 0.03377 0.04604 0.04976 1.38% FabArray::ParallelCopy_nowait() 41 0.0269 0.04322 0.04844 1.34% StateDataPhysBCFunct::() 41 0.03582 0.04194 0.04601 1.27% StateData::FillBoundary(geom) 41 0.0357 0.0418 0.04586 1.27% Castro::normalize_species() 62 0.04115 0.04175 0.04264 1.18% Castro::construct_new_source() 50 0.02555 0.03032 0.03284 0.91% Castro::post_init() 1 0.02739 0.02764 0.02781 0.77% Gravity::interpolate_monopole_grav() 21 0.02693 0.0276 0.02781 0.77% Castro::construct_new_gravity_source() 10 0.02066 0.02386 0.02578 0.71% Amr::writePlotFile() 2 0.02469 0.02485 0.02511 0.70% VisMF::Write(FabArray) 2 0.01199 0.01285 0.01679 0.46% Castro::post_timestep() 10 0.01581 0.01605 0.01672 0.46% Castro::apply_source_to_state() 20 0.008782 0.0144 0.0163 0.45% MultiFab::Saxpy() 20 0.00874 0.01435 0.01625 0.45% FabArray::setDomainBndry() 41 0.005179 0.01184 0.01513 0.42% Castro::check_for_nan() 20 0.009705 0.01105 0.0123 0.34% MultiFab::contains_nan() 20 0.009683 0.01103 0.01227 0.34% Castro::Castro() 1 0.008773 0.009913 0.01215 0.34% Castro::construct_old_source() 50 0.005045 0.01031 0.0119 0.33% Castro::construct_old_gravity_source() 10 0.005005 0.01023 0.01181 0.33% Castro::computeNewDt() 9 0.006931 0.007953 0.008647 0.24% Castro::initMFs() 1 0.005409 0.006393 0.008444 0.23% Castro::enforce_min_density() 62 0.006141 0.006746 0.007073 0.20% AmrLevel::AmrLevel(dm) 1 0.004518 0.005175 0.0066 0.18% StateData::define() 4 0.0045 0.005154 0.006578 0.18% Castro::swap_state_time_levels() 10 0.002876 0.00366 0.003937 0.11% Castro::buildMetrics() 1 0.001376 0.001623 0.00212 0.06% Castro::post_regrid() 1 0.001543 0.0016 0.001654 0.05% Castro::finalize_do_advance() 10 0.0005415 0.001168 0.001376 0.04% Amr::InitAmr() 1 0.0002819 0.000351 0.0004774 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.253e-05 0.000157 0.0002285 0.01% DistributionMapping::LeastUsedCPUs() 1 7.106e-06 0.000151 0.0002218 0.01% Castro::enforce_consistent_e() 1 7.929e-05 8.623e-05 9.457e-05 0.00% FabArrayBase::getCPC() 41 7.432e-05 8.343e-05 9.259e-05 0.00% Castro::finalize_advance() 10 5.931e-05 6.215e-05 6.596e-05 0.00% Amr::writeSmallPlotFile() 1 2.466e-05 4.49e-05 5.78e-05 0.00% FabArrayBase::CPC::define() 2 2.173e-05 2.666e-05 3.292e-05 0.00% Castro::enforce_speed_limit() 62 2.515e-05 2.901e-05 3.248e-05 0.00% Gravity::swapTimeLevels() 10 6.696e-06 1.257e-05 1.54e-05 0.00% Amr::initSubcycle() 1 8.127e-06 1.015e-05 1.401e-05 0.00% Castro::create_source_corrector() 10 7.344e-06 1.05e-05 1.309e-05 0.00% Gravity::set_mass_offset() 10 7.73e-06 1.025e-05 1.257e-05 0.00% Castro::FluxRegCrseInit 10 6.894e-06 9.531e-06 1.127e-05 0.00% Castro::retry_advance_ctu() 10 4.372e-06 5.844e-06 7.028e-06 0.00% Castro::FluxRegFineAdd() 10 1.861e-06 2.088e-06 2.295e-06 0.00% DistributionMapping::Distribute() 1 1.043e-06 1.164e-06 1.388e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-25-g0540fed3576f) finalized