MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.05-25-g0540fed3576f) initialized Starting run at 05:38:21 UTC on 2022-05-20. Successfully read inputs file ... Castro git describe: 22.05-28-gdd4cbd13f AMReX git describe: 22.05-25-g0540fed35 Microphysics git describe: 22.05 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013632944 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.364423786 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.339151847 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.335304551 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337291382 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.337195205 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.344244957 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330961509 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.330571521 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.332114966 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.331565632 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009510123 seconds Ending run at 05:38:24 UTC on 2022-05-20. Run time = 3.571730084 Run time without initialization = 3.398254778 Average number of zones advanced per microsecond: 0.771 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.569 ... 3.571 ... 3.572 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0337 2.3341 2.4478 68.53% Castro::do_advance_ctu() 10 0.04103 0.157 0.4609 12.90% Gravity::make_radial_gravity() 21 0.3444 0.3556 0.3756 10.52% Castro::initData() 1 0.03773 0.07713 0.1128 3.16% FabArray::ParallelCopy_finish() 41 0.03389 0.05132 0.09916 2.78% Castro::estTimeStep() 21 0.02058 0.05899 0.09446 2.64% FabArray::setVal() 143 0.06238 0.0726 0.07772 2.18% Castro::reset_internal_energy(Fab) 1008 0.04629 0.04951 0.05141 1.44% StateData::FillBoundary(geom) 41 0.03563 0.04247 0.04997 1.40% FabArray::ParallelCopy_nowait() 41 0.03282 0.04425 0.04879 1.37% Castro::normalize_species() 62 0.03905 0.04095 0.04194 1.17% FillPatchIterator::Initialize 41 0.02047 0.03275 0.03749 1.05% Gravity::interpolate_monopole_grav() 21 0.02564 0.02726 0.028 0.78% Castro::construct_new_gravity_source() 10 0.02133 0.02393 0.0249 0.70% Castro::expand_state() 10 0.01679 0.02109 0.02342 0.66% Castro::computeTemp() 63 0.01646 0.0188 0.01978 0.55% Castro::initialize_do_advance() 10 0.01287 0.01759 0.01918 0.54% MultiFab::Saxpy() 20 0.01161 0.01506 0.01685 0.47% FabArray::setDomainBndry() 41 0.005991 0.01258 0.01591 0.45% VisMF::Write(FabArray) 2 0.01081 0.01148 0.01385 0.39% MultiFab::contains_nan() 20 0.01051 0.0115 0.01313 0.37% Gravity::get_new_grav_vector() 11 0.009581 0.01176 0.01295 0.36% Amr::writePlotFile() 2 0.009491 0.01202 0.0128 0.36% Castro::construct_old_gravity_source() 10 0.006766 0.01069 0.01241 0.35% Gravity::get_old_grav_vector() 10 0.007635 0.01002 0.01163 0.33% Castro::initialize_advance() 10 0.01091 0.01131 0.01149 0.32% Castro::enforce_min_density() 62 0.00608 0.006695 0.00732 0.20% Castro::construct_new_source() 50 0.005172 0.006611 0.007184 0.20% Castro::initMFs() 1 0.005507 0.005718 0.007084 0.20% main() 1 0.003426 0.005586 0.006805 0.19% StateData::define() 4 0.004506 0.004603 0.005032 0.14% Castro::swap_state_time_levels() 10 0.002992 0.00387 0.004004 0.11% Castro::finalize_do_advance() 10 0.001102 0.00143 0.001568 0.04% Castro::buildMetrics() 1 0.001288 0.001327 0.001458 0.04% Amr::coarseTimeStep() 10 0.0004171 0.0006029 0.00106 0.03% DistributionMapping::LeastUsedCPUs() 1 9.955e-06 0.0005686 0.0006747 0.02% Amr::timeStep() 10 0.00016 0.0002223 0.0005163 0.01% Amr::InitAmr() 1 0.0002439 0.0002763 0.0004258 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000274 0.0002959 0.0003127 0.01% Castro::clean_state() 62 0.0001219 0.0001544 0.0001778 0.00% StateDataPhysBCFunct::() 41 0.0001048 0.0001355 0.0001677 0.00% Castro::construct_old_source() 50 3.927e-05 7.454e-05 9.529e-05 0.00% Castro::enforce_consistent_e() 1 8.061e-05 8.687e-05 9.448e-05 0.00% FabArray::ParallelCopy() 41 5.04e-05 7.246e-05 8.883e-05 0.00% Amr::FinalizeInit() 1 3.074e-06 1.48e-05 8.711e-05 0.00% Castro::do_new_sources() 10 3.875e-05 6.867e-05 8.262e-05 0.00% Castro::Castro() 1 4.978e-05 6.757e-05 8.258e-05 0.00% Castro::do_old_sources() 10 3.793e-05 6.759e-05 8.187e-05 0.00% Castro::construct_old_gravity() 10 3.59e-05 5.7e-05 8.107e-05 0.00% FillPatchSingleLevel 41 5.023e-05 6.945e-05 7.898e-05 0.00% Amr::writeSmallPlotFile() 1 3.009e-05 4.91e-05 7.013e-05 0.00% Castro::subcycle_advance_ctu() 10 3.276e-05 5.062e-05 6.786e-05 0.00% Castro::apply_source_to_state() 20 2.953e-05 4.87e-05 6.347e-05 0.00% FabArrayBase::getCPC() 41 3.829e-05 5.104e-05 5.914e-05 0.00% Castro::construct_new_gravity() 10 3.817e-05 4.567e-05 5.146e-05 0.00% Castro::finalize_advance() 10 4.087e-05 4.644e-05 5.081e-05 0.00% Castro::advance() 10 2.72e-05 3.943e-05 4.847e-05 0.00% Amr::defBaseLevel() 1 2.116e-05 2.606e-05 3.267e-05 0.00% FabArrayBase::CPC::define() 2 2.349e-05 2.692e-05 3.227e-05 0.00% Castro::enforce_speed_limit() 62 2.091e-05 2.598e-05 3.153e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.363e-05 2.198e-05 2.926e-05 0.00% Castro::check_for_nan() 20 1.765e-05 2.328e-05 2.581e-05 0.00% Gravity::swapTimeLevels() 10 8.138e-06 1.246e-05 1.55e-05 0.00% Castro::post_init() 1 8.016e-06 9.795e-06 1.364e-05 0.00% Castro::create_source_corrector() 10 7.582e-06 1.092e-05 1.341e-05 0.00% Castro::post_timestep() 10 7.473e-06 1.024e-05 1.238e-05 0.00% Castro::FluxRegCrseInit 10 5.997e-06 8.943e-06 1.159e-05 0.00% Gravity::set_mass_offset() 10 6.837e-06 9.495e-06 1.097e-05 0.00% Castro::computeNewDt() 9 6.388e-06 8.69e-06 9.822e-06 0.00% Amr::initSubcycle() 1 7.876e-06 8.359e-06 9.395e-06 0.00% Castro::retry_advance_ctu() 10 3.991e-06 5.893e-06 7.175e-06 0.00% Amr::InitializeInit() 1 1.902e-06 2.88e-06 7.058e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.615e-06 4.552e-06 6.958e-06 0.00% Castro::post_regrid() 1 1.634e-06 3.217e-06 4.857e-06 0.00% Castro::computeInitialDt() 2 2.902e-06 3.853e-06 4.586e-06 0.00% Castro::FluxRegFineAdd() 10 1.88e-06 2.585e-06 4.001e-06 0.00% Amr::init() 1 1.5e-06 2.157e-06 2.803e-06 0.00% Amr::initialInit() 1 1.051e-06 1.347e-06 1.765e-06 0.00% DistributionMapping::Distribute() 1 8.59e-07 9.889e-07 1.223e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.569 3.571 3.572 100.00% Amr::coarseTimeStep() 10 3.383 3.383 3.383 94.70% Amr::timeStep() 10 3.372 3.373 3.374 94.46% Castro::advance() 10 3.357 3.357 3.358 94.00% Castro::subcycle_advance_ctu() 10 3.28 3.285 3.296 92.28% Castro::do_advance_ctu() 10 3.28 3.284 3.296 92.28% Castro::construct_ctu_hydro_source() 10 2.034 2.334 2.448 68.53% Gravity::make_radial_gravity() 21 0.3444 0.3556 0.3756 10.52% Gravity::get_new_grav_vector() 11 0.2295 0.231 0.2326 6.51% Castro::construct_old_gravity() 10 0.2061 0.2156 0.2304 6.45% Gravity::get_old_grav_vector() 10 0.2052 0.2147 0.2291 6.41% Castro::construct_new_gravity() 10 0.2056 0.207 0.2086 5.84% FillPatchIterator::Initialize 41 0.1761 0.1837 0.1944 5.44% Castro::initialize_do_advance() 10 0.1672 0.1708 0.1757 4.92% Amr::init() 1 0.1723 0.1729 0.173 4.84% FillPatchSingleLevel 41 0.1238 0.1384 0.168 4.70% Amr::initialInit() 1 0.1586 0.159 0.1592 4.46% FabArray::ParallelCopy() 41 0.08185 0.09572 0.1322 3.70% Amr::InitializeInit() 1 0.05703 0.09642 0.1319 3.69% Amr::defBaseLevel() 1 0.05702 0.09641 0.1319 3.69% Castro::expand_state() 10 0.1175 0.1226 0.1264 3.54% Castro::clean_state() 62 0.1077 0.1155 0.1191 3.33% Castro::initData() 1 0.04185 0.08125 0.1169 3.27% Amr::FinalizeInit() 1 0.02704 0.06257 0.1019 2.85% FabArray::ParallelCopy_finish() 41 0.03389 0.05132 0.09916 2.78% Castro::estTimeStep() 21 0.02058 0.05899 0.09446 2.64% FabArray::setVal() 143 0.06238 0.0726 0.07772 2.18% Castro::initialize_advance() 10 0.06099 0.07279 0.07747 2.17% Castro::computeInitialDt() 2 0.001708 0.03717 0.07662 2.15% Castro::computeTemp() 63 0.06326 0.0686 0.07138 2.00% Castro::do_new_sources() 10 0.05751 0.0645 0.06716 1.88% Castro::reset_internal_energy(MultiFab) 63 0.04658 0.0498 0.05171 1.45% Castro::reset_internal_energy(Fab) 1008 0.04629 0.04951 0.05141 1.44% StateDataPhysBCFunct::() 41 0.03574 0.04261 0.05012 1.40% Castro::do_old_sources() 10 0.04105 0.04762 0.0501 1.40% StateData::FillBoundary(geom) 41 0.03563 0.04247 0.04997 1.40% FabArray::ParallelCopy_nowait() 41 0.03288 0.04433 0.04887 1.37% Castro::normalize_species() 62 0.03905 0.04095 0.04194 1.17% Castro::construct_new_source() 50 0.02659 0.03054 0.03207 0.90% Gravity::interpolate_monopole_grav() 21 0.02564 0.02726 0.028 0.78% Castro::construct_new_gravity_source() 10 0.02133 0.02393 0.0249 0.70% Castro::post_init() 1 0.02456 0.02472 0.02483 0.70% Amr::writePlotFile() 2 0.02334 0.0235 0.02365 0.66% Castro::apply_source_to_state() 20 0.01164 0.01511 0.01691 0.47% MultiFab::Saxpy() 20 0.01161 0.01506 0.01685 0.47% Castro::post_timestep() 10 0.0145 0.01561 0.01635 0.46% FabArray::setDomainBndry() 41 0.005991 0.01258 0.01591 0.45% VisMF::Write(FabArray) 2 0.01081 0.01148 0.01385 0.39% Castro::check_for_nan() 20 0.01053 0.01153 0.01315 0.37% MultiFab::contains_nan() 20 0.01051 0.0115 0.01313 0.37% Castro::construct_old_source() 50 0.006805 0.01076 0.0125 0.35% Castro::construct_old_gravity_source() 10 0.006766 0.01069 0.01241 0.35% Castro::Castro() 1 0.009784 0.009939 0.01081 0.30% Castro::computeNewDt() 9 0.007007 0.00774 0.009276 0.26% Castro::enforce_min_density() 62 0.00608 0.006695 0.00732 0.20% Castro::initMFs() 1 0.005507 0.005718 0.007084 0.20% AmrLevel::AmrLevel(dm) 1 0.004535 0.004625 0.005051 0.14% StateData::define() 4 0.004506 0.004603 0.005032 0.14% Castro::swap_state_time_levels() 10 0.002992 0.00387 0.004004 0.11% Castro::post_regrid() 1 0.001537 0.00159 0.001642 0.05% Castro::buildMetrics() 1 0.001421 0.001464 0.00162 0.05% Castro::finalize_do_advance() 10 0.001102 0.00143 0.001568 0.04% DistributionMapping::SFCProcessorMapDoIt() 1 1.524e-05 0.0005741 0.0006828 0.02% DistributionMapping::LeastUsedCPUs() 1 9.955e-06 0.0005686 0.0006747 0.02% Amr::InitAmr() 1 0.000252 0.0002846 0.0004352 0.01% Castro::enforce_consistent_e() 1 8.061e-05 8.687e-05 9.448e-05 0.00% FabArrayBase::getCPC() 41 6.193e-05 7.796e-05 8.607e-05 0.00% Amr::writeSmallPlotFile() 1 3.009e-05 4.91e-05 7.013e-05 0.00% Castro::finalize_advance() 10 4.932e-05 5.797e-05 6.503e-05 0.00% FabArrayBase::CPC::define() 2 2.349e-05 2.692e-05 3.227e-05 0.00% Castro::enforce_speed_limit() 62 2.091e-05 2.598e-05 3.153e-05 0.00% Gravity::swapTimeLevels() 10 8.138e-06 1.246e-05 1.55e-05 0.00% Castro::create_source_corrector() 10 7.582e-06 1.092e-05 1.341e-05 0.00% Castro::FluxRegCrseInit 10 5.997e-06 8.943e-06 1.159e-05 0.00% Gravity::set_mass_offset() 10 6.837e-06 9.495e-06 1.097e-05 0.00% Amr::initSubcycle() 1 7.876e-06 8.359e-06 9.395e-06 0.00% Castro::retry_advance_ctu() 10 3.991e-06 5.893e-06 7.175e-06 0.00% Castro::FluxRegFineAdd() 10 1.88e-06 2.585e-06 4.001e-06 0.00% DistributionMapping::Distribute() 1 8.59e-07 9.889e-07 1.223e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.05-25-g0540fed3576f) finalized