MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-5-gc96e79e8409b) initialized Starting run at 05:37:39 UTC on 2022-06-03. Successfully read inputs file ... Castro git describe: 22.05-40-g9af379e6c AMReX git describe: 22.06-5-gc96e79e84 Microphysics git describe: 22.06 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014726291 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.358491224 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.33737193 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.336182606 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.335115659 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.343365856 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.342983459 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.332461482 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.331425328 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.332790644 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.332002017 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009836062 seconds Ending run at 05:37:42 UTC on 2022-06-03. Run time = 3.638917121 Run time without initialization = 3.398631665 Average number of zones advanced per microsecond: 0.771 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.636 ... 3.638 ... 3.639 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0421 2.3474 2.4450 67.19% Castro::do_advance_ctu() 10 0.04344 0.1403 0.4473 12.29% Gravity::make_radial_gravity() 21 0.3469 0.3603 0.3899 10.71% Castro::initData() 1 0.03773 0.0869 0.1396 3.84% Castro::estTimeStep() 21 0.02625 0.07906 0.127 3.49% FabArray::ParallelCopy_finish() 41 0.04233 0.06163 0.1234 3.39% FabArray::setVal() 143 0.05802 0.06834 0.07172 1.97% Castro::reset_internal_energy(Fab) 1008 0.04694 0.04979 0.05182 1.42% Amr::writePlotFile() 2 0.04626 0.0489 0.04969 1.37% FabArray::ParallelCopy_nowait() 41 0.02575 0.04335 0.04931 1.35% StateData::FillBoundary(geom) 41 0.03636 0.04238 0.04645 1.28% Castro::normalize_species() 62 0.03988 0.04159 0.04231 1.16% FillPatchIterator::Initialize 41 0.02048 0.03265 0.03677 1.01% Gravity::interpolate_monopole_grav() 21 0.02636 0.02757 0.02811 0.77% Castro::construct_new_gravity_source() 10 0.02037 0.02335 0.02401 0.66% Castro::expand_state() 10 0.009717 0.01841 0.02202 0.61% Castro::computeTemp() 63 0.01797 0.01886 0.01959 0.54% Castro::initialize_do_advance() 10 0.009166 0.01673 0.01873 0.51% MultiFab::Saxpy() 20 0.008566 0.01435 0.01673 0.46% VisMF::Write(FabArray) 2 0.01179 0.01237 0.0152 0.42% FabArray::setDomainBndry() 41 0.005752 0.01201 0.01504 0.41% Gravity::get_new_grav_vector() 11 0.007253 0.01113 0.01252 0.34% MultiFab::contains_nan() 20 0.009357 0.01111 0.01217 0.33% Castro::construct_old_gravity_source() 10 0.005044 0.01012 0.01203 0.33% Gravity::get_old_grav_vector() 10 0.005528 0.009431 0.01097 0.30% Castro::initialize_advance() 10 0.006259 0.009818 0.0106 0.29% Castro::initMFs() 1 0.005541 0.00652 0.0087 0.24% Castro::enforce_min_density() 62 0.005946 0.00667 0.007063 0.19% Castro::construct_new_source() 50 0.004747 0.006427 0.007018 0.19% StateData::define() 4 0.004536 0.005242 0.00677 0.19% main() 1 0.003211 0.00542 0.005937 0.16% Castro::swap_state_time_levels() 10 0.002924 0.003806 0.004371 0.12% Amr::coarseTimeStep() 10 0.0009446 0.001509 0.00303 0.08% Castro::buildMetrics() 1 0.001315 0.001526 0.001954 0.05% Castro::finalize_do_advance() 10 0.0005441 0.00103 0.001187 0.03% Amr::timeStep() 10 0.0001778 0.0002319 0.0004887 0.01% Amr::InitAmr() 1 0.0002549 0.0003229 0.0004481 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000314 0.0003238 0.0003438 0.01% DistributionMapping::LeastUsedCPUs() 1 7.287e-06 0.0001609 0.0002371 0.01% Castro::clean_state() 62 0.0001629 0.0001824 0.0001983 0.01% StateDataPhysBCFunct::() 41 0.0001018 0.0001243 0.0001496 0.00% Castro::enforce_consistent_e() 1 7.941e-05 9.214e-05 0.0001426 0.00% Castro::construct_old_source() 50 3.733e-05 7.794e-05 9.623e-05 0.00% FabArray::ParallelCopy() 41 6.542e-05 8.151e-05 9.171e-05 0.00% FillPatchSingleLevel 41 6.49e-05 7.473e-05 8.579e-05 0.00% Castro::do_old_sources() 10 3.87e-05 6.64e-05 8.439e-05 0.00% Castro::subcycle_advance_ctu() 10 3.343e-05 5.181e-05 8.299e-05 0.00% Castro::do_new_sources() 10 3.96e-05 6.822e-05 8.223e-05 0.00% Castro::Castro() 1 5e-05 5.979e-05 7.971e-05 0.00% Amr::FinalizeInit() 1 3.888e-06 1.352e-05 7.517e-05 0.00% Castro::construct_old_gravity() 10 3.493e-05 5.406e-05 6.705e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 4.577e-05 6.329e-05 0.00% FabArrayBase::getCPC() 41 5.367e-05 5.697e-05 6.163e-05 0.00% Castro::apply_source_to_state() 20 3.926e-05 4.91e-05 5.902e-05 0.00% Castro::finalize_advance() 10 4.852e-05 5.231e-05 5.499e-05 0.00% Castro::construct_new_gravity() 10 3.737e-05 4.477e-05 5.325e-05 0.00% Castro::advance() 10 2.996e-05 3.989e-05 4.374e-05 0.00% Amr::defBaseLevel() 1 2.719e-05 3.495e-05 4.183e-05 0.00% FabArrayBase::CPC::define() 2 2.274e-05 2.802e-05 3.646e-05 0.00% Castro::post_timestep() 10 1.251e-05 2.246e-05 2.925e-05 0.00% Castro::enforce_speed_limit() 62 2.281e-05 2.571e-05 2.87e-05 0.00% Castro::check_for_nan() 20 1.922e-05 2.403e-05 2.732e-05 0.00% Amr::initSubcycle() 1 8.294e-06 1.254e-05 2.337e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.256e-05 1.609e-05 1.904e-05 0.00% Gravity::swapTimeLevels() 10 5.283e-06 1.206e-05 1.701e-05 0.00% Castro::create_source_corrector() 10 6.504e-06 1.145e-05 1.4e-05 0.00% Castro::post_init() 1 8.455e-06 1.04e-05 1.345e-05 0.00% Gravity::set_mass_offset() 10 6.483e-06 1.01e-05 1.262e-05 0.00% Castro::FluxRegCrseInit 10 6.264e-06 9.084e-06 1.167e-05 0.00% Castro::computeNewDt() 9 7.494e-06 9.735e-06 1.136e-05 0.00% Castro::retry_advance_ctu() 10 3.638e-06 5.891e-06 7.93e-06 0.00% Amr::InitializeInit() 1 2.273e-06 3.74e-06 7.187e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.666e-06 4.915e-06 5.687e-06 0.00% Castro::post_regrid() 1 2.056e-06 3.255e-06 5.201e-06 0.00% Castro::computeInitialDt() 2 3e-06 4.295e-06 5.019e-06 0.00% Castro::FluxRegFineAdd() 10 1.993e-06 2.453e-06 3.21e-06 0.00% Amr::init() 1 2.261e-06 2.433e-06 2.903e-06 0.00% DistributionMapping::Distribute() 1 1.122e-06 1.516e-06 1.811e-06 0.00% Amr::initialInit() 1 1.167e-06 1.304e-06 1.662e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.636 3.638 3.639 100.00% Amr::coarseTimeStep() 10 3.383 3.383 3.383 92.96% Amr::timeStep() 10 3.372 3.373 3.374 92.71% Castro::advance() 10 3.357 3.357 3.357 92.26% Castro::subcycle_advance_ctu() 10 3.284 3.287 3.295 90.55% Castro::do_advance_ctu() 10 3.284 3.287 3.295 90.55% Castro::construct_ctu_hydro_source() 10 2.042 2.347 2.445 67.19% Gravity::make_radial_gravity() 21 0.3469 0.3603 0.3899 10.71% Amr::init() 1 0.2397 0.2398 0.2399 6.59% Castro::construct_old_gravity() 10 0.203 0.2151 0.2373 6.52% Gravity::get_old_grav_vector() 10 0.2021 0.2143 0.2368 6.51% Gravity::get_new_grav_vector() 11 0.2301 0.2345 0.2363 6.49% FillPatchIterator::Initialize 41 0.1848 0.1924 0.2124 5.84% Castro::construct_new_gravity() 10 0.203 0.2068 0.2083 5.72% Amr::initialInit() 1 0.1882 0.1884 0.1888 5.19% FillPatchSingleLevel 41 0.1334 0.1477 0.1858 5.11% Castro::initialize_do_advance() 10 0.1622 0.1742 0.1808 4.97% Amr::InitializeInit() 1 0.05569 0.1066 0.1576 4.33% Amr::defBaseLevel() 1 0.05569 0.1066 0.1576 4.33% FabArray::ParallelCopy() 41 0.0901 0.1051 0.1493 4.10% Castro::initData() 1 0.04161 0.09095 0.1437 3.95% Amr::FinalizeInit() 1 0.03074 0.08184 0.1331 3.66% Castro::expand_state() 10 0.1207 0.1272 0.1315 3.61% Castro::estTimeStep() 21 0.02625 0.07906 0.127 3.49% FabArray::ParallelCopy_finish() 41 0.04233 0.06163 0.1234 3.39% Castro::clean_state() 62 0.1096 0.1164 0.1197 3.29% Castro::computeInitialDt() 2 0.001816 0.05278 0.1038 2.85% Castro::initialize_advance() 10 0.06147 0.07034 0.0731 2.01% Castro::computeTemp() 63 0.06525 0.06897 0.07172 1.97% FabArray::setVal() 143 0.05802 0.06834 0.07172 1.97% Castro::do_new_sources() 10 0.05318 0.0631 0.06541 1.80% Amr::writePlotFile() 2 0.06103 0.06127 0.06148 1.69% Castro::reset_internal_energy(MultiFab) 63 0.04729 0.05012 0.05215 1.43% Castro::reset_internal_energy(Fab) 1008 0.04694 0.04979 0.05182 1.42% FabArray::ParallelCopy_nowait() 41 0.02585 0.04343 0.04938 1.36% Castro::do_old_sources() 10 0.03219 0.04511 0.04918 1.35% StateDataPhysBCFunct::() 41 0.03647 0.0425 0.04659 1.28% StateData::FillBoundary(geom) 41 0.03636 0.04238 0.04645 1.28% Castro::normalize_species() 62 0.03988 0.04159 0.04231 1.16% Castro::construct_new_source() 50 0.02512 0.02978 0.03102 0.85% Castro::post_init() 1 0.02818 0.02843 0.02876 0.79% Gravity::interpolate_monopole_grav() 21 0.02636 0.02757 0.02811 0.77% Castro::construct_new_gravity_source() 10 0.02037 0.02335 0.02401 0.66% Castro::apply_source_to_state() 20 0.008605 0.01439 0.01679 0.46% MultiFab::Saxpy() 20 0.008566 0.01435 0.01673 0.46% Castro::post_timestep() 10 0.01494 0.01594 0.0165 0.45% VisMF::Write(FabArray) 2 0.01179 0.01237 0.0152 0.42% FabArray::setDomainBndry() 41 0.005752 0.01201 0.01504 0.41% Castro::Castro() 1 0.009085 0.01018 0.0125 0.34% Castro::check_for_nan() 20 0.009382 0.01114 0.01219 0.34% MultiFab::contains_nan() 20 0.009357 0.01111 0.01217 0.33% Castro::construct_old_source() 50 0.005082 0.01019 0.01213 0.33% Castro::construct_old_gravity_source() 10 0.005044 0.01012 0.01203 0.33% Castro::initMFs() 1 0.005541 0.00652 0.0087 0.24% Castro::computeNewDt() 9 0.007191 0.0072 0.007211 0.20% Castro::enforce_min_density() 62 0.005946 0.00667 0.007063 0.19% AmrLevel::AmrLevel(dm) 1 0.004548 0.005258 0.006789 0.19% StateData::define() 4 0.004536 0.005242 0.00677 0.19% Castro::swap_state_time_levels() 10 0.002924 0.003806 0.004371 0.12% Castro::buildMetrics() 1 0.001457 0.001679 0.002179 0.06% Castro::post_regrid() 1 0.001519 0.001641 0.00186 0.05% Castro::finalize_do_advance() 10 0.0005441 0.00103 0.001187 0.03% Amr::InitAmr() 1 0.0002638 0.0003355 0.0004715 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.388e-05 0.0001674 0.0002441 0.01% DistributionMapping::LeastUsedCPUs() 1 7.287e-06 0.0001609 0.0002371 0.01% Castro::enforce_consistent_e() 1 7.941e-05 9.214e-05 0.0001426 0.00% FabArrayBase::getCPC() 41 7.763e-05 8.499e-05 9.372e-05 0.00% Castro::finalize_advance() 10 5.816e-05 6.384e-05 6.896e-05 0.00% Amr::writeSmallPlotFile() 1 2.545e-05 4.577e-05 6.329e-05 0.00% FabArrayBase::CPC::define() 2 2.274e-05 2.802e-05 3.646e-05 0.00% Castro::enforce_speed_limit() 62 2.281e-05 2.571e-05 2.87e-05 0.00% Amr::initSubcycle() 1 8.294e-06 1.254e-05 2.337e-05 0.00% Gravity::swapTimeLevels() 10 5.283e-06 1.206e-05 1.701e-05 0.00% Castro::create_source_corrector() 10 6.504e-06 1.145e-05 1.4e-05 0.00% Gravity::set_mass_offset() 10 6.483e-06 1.01e-05 1.262e-05 0.00% Castro::FluxRegCrseInit 10 6.264e-06 9.084e-06 1.167e-05 0.00% Castro::retry_advance_ctu() 10 3.638e-06 5.891e-06 7.93e-06 0.00% Castro::FluxRegFineAdd() 10 1.993e-06 2.453e-06 3.21e-06 0.00% DistributionMapping::Distribute() 1 1.122e-06 1.516e-06 1.811e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-5-gc96e79e8409b) finalized