MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-7-gff9e832483f1) initialized Starting run at 05:38:04 UTC on 2022-06-06. Successfully read inputs file ... Castro git describe: 22.06-4-gfbc287aee AMReX git describe: 22.06-7-gff9e83248 Microphysics git describe: 22.06 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013612745 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.351773044 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.3409765 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.340351751 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341815525 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.348084607 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.346917605 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.339533389 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.334365767 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.334801775 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.339608163 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00975486 seconds Ending run at 05:38:07 UTC on 2022-06-06. Run time = 3.641890303 Run time without initialization = 3.449517484 Average number of zones advanced per microsecond: 0.760 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.641 ... 3.642 ... 3.642 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0123 2.3372 2.4941 68.48% Castro::do_advance_ctu() 10 0.02799 0.1877 0.515 14.14% Gravity::make_radial_gravity() 21 0.3419 0.355 0.385 10.57% Castro::initData() 1 0.03764 0.08656 0.1282 3.52% FabArray::ParallelCopy_finish() 41 0.03813 0.06096 0.1255 3.45% Castro::estTimeStep() 21 0.02855 0.07469 0.1243 3.41% FabArray::setVal() 143 0.05731 0.06773 0.07105 1.95% Castro::reset_internal_energy(Fab) 1008 0.04564 0.04962 0.05155 1.42% FabArray::ParallelCopy_nowait() 41 0.02538 0.04313 0.04917 1.35% StateData::FillBoundary(geom) 41 0.03482 0.04261 0.04745 1.30% Castro::normalize_species() 62 0.04005 0.04183 0.04332 1.19% FillPatchIterator::Initialize 41 0.01959 0.0321 0.03664 1.01% Gravity::interpolate_monopole_grav() 21 0.02556 0.02734 0.02819 0.77% Amr::writePlotFile() 2 0.02268 0.02642 0.02805 0.77% Castro::construct_new_gravity_source() 10 0.02033 0.02359 0.02493 0.68% Castro::expand_state() 10 0.009536 0.01873 0.02251 0.62% Castro::computeTemp() 63 0.01743 0.01906 0.02058 0.57% Castro::initialize_do_advance() 10 0.008611 0.01649 0.01843 0.51% MultiFab::Saxpy() 20 0.008713 0.01427 0.01615 0.44% VisMF::Write(FabArray) 2 0.01095 0.01229 0.01592 0.44% FabArray::setDomainBndry() 41 0.006151 0.01154 0.01467 0.40% Gravity::get_new_grav_vector() 11 0.007224 0.01124 0.01393 0.38% MultiFab::contains_nan() 20 0.009398 0.01097 0.01236 0.34% Castro::construct_old_gravity_source() 10 0.005047 0.01002 0.01176 0.32% Gravity::get_old_grav_vector() 10 0.00548 0.009544 0.01135 0.31% Castro::initialize_advance() 10 0.006371 0.00986 0.01043 0.29% Castro::initMFs() 1 0.005495 0.006901 0.008086 0.22% Castro::enforce_min_density() 62 0.005834 0.006675 0.007258 0.20% Castro::construct_new_source() 50 0.00477 0.006371 0.006963 0.19% StateData::define() 4 0.004566 0.005653 0.006607 0.18% main() 1 0.004759 0.005356 0.005717 0.16% Castro::swap_state_time_levels() 10 0.00265 0.003633 0.003954 0.11% Castro::buildMetrics() 1 0.001295 0.001618 0.001901 0.05% Amr::coarseTimeStep() 10 0.001109 0.001299 0.001725 0.05% Castro::finalize_do_advance() 10 0.0005336 0.001057 0.001237 0.03% Amr::InitAmr() 1 0.0002708 0.0003834 0.0005811 0.02% Amr::timeStep() 10 0.0001705 0.0002273 0.0004803 0.01% DistributionMapping::LeastUsedCPUs() 1 1.089e-05 0.0002602 0.0003882 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002811 0.0002963 0.0003119 0.01% Castro::clean_state() 62 0.0001421 0.0001611 0.0001866 0.01% StateDataPhysBCFunct::() 41 0.0001158 0.0001388 0.0001565 0.00% FabArray::ParallelCopy() 41 8.14e-05 9.319e-05 0.0001061 0.00% Castro::construct_old_source() 50 3.145e-05 7.523e-05 0.0001016 0.00% Castro::enforce_consistent_e() 1 8.102e-05 8.908e-05 0.0001011 0.00% Castro::do_old_sources() 10 3.508e-05 7.111e-05 9.071e-05 0.00% Castro::do_new_sources() 10 4.188e-05 6.686e-05 8.437e-05 0.00% FillPatchSingleLevel 41 5.829e-05 6.873e-05 7.751e-05 0.00% Castro::construct_old_gravity() 10 3.341e-05 5.692e-05 7.503e-05 0.00% Amr::writeSmallPlotFile() 1 2.992e-05 4.628e-05 7.08e-05 0.00% Castro::Castro() 1 5.559e-05 6.04e-05 6.991e-05 0.00% Amr::FinalizeInit() 1 3.785e-06 1.249e-05 6.849e-05 0.00% FabArrayBase::getCPC() 41 4.724e-05 5.356e-05 6.064e-05 0.00% Castro::apply_source_to_state() 20 3.541e-05 4.468e-05 5.907e-05 0.00% Castro::subcycle_advance_ctu() 10 3.571e-05 4.875e-05 5.815e-05 0.00% Castro::finalize_advance() 10 4.822e-05 5.218e-05 5.583e-05 0.00% Castro::construct_new_gravity() 10 3.172e-05 4.558e-05 5.231e-05 0.00% Castro::advance() 10 2.897e-05 4.15e-05 5.056e-05 0.00% Amr::defBaseLevel() 1 2.668e-05 3.519e-05 4.497e-05 0.00% Castro::enforce_speed_limit() 62 2.229e-05 2.608e-05 3.5e-05 0.00% FabArrayBase::CPC::define() 2 2.365e-05 2.738e-05 3.102e-05 0.00% Castro::check_for_nan() 20 2.087e-05 2.401e-05 2.734e-05 0.00% Castro::post_timestep() 10 1.203e-05 1.716e-05 2.349e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.35e-05 1.618e-05 1.995e-05 0.00% Gravity::swapTimeLevels() 10 5.26e-06 1.246e-05 1.688e-05 0.00% Amr::initSubcycle() 1 7.773e-06 1.123e-05 1.515e-05 0.00% Castro::post_init() 1 8.085e-06 1.079e-05 1.429e-05 0.00% Castro::create_source_corrector() 10 6.265e-06 1.089e-05 1.333e-05 0.00% Gravity::set_mass_offset() 10 7.535e-06 1.005e-05 1.27e-05 0.00% Castro::FluxRegCrseInit 10 6.586e-06 8.804e-06 1.167e-05 0.00% Castro::computeNewDt() 9 7.135e-06 8.837e-06 1.091e-05 0.00% Amr::InitializeInit() 1 2.144e-06 3.267e-06 8.31e-06 0.00% Castro::retry_advance_ctu() 10 4.75e-06 6.127e-06 7.646e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.74e-06 4.655e-06 5.761e-06 0.00% Castro::computeInitialDt() 2 3.52e-06 4.211e-06 5.346e-06 0.00% Castro::post_regrid() 1 2.065e-06 2.893e-06 4.612e-06 0.00% Amr::init() 1 2.192e-06 2.493e-06 2.831e-06 0.00% Castro::FluxRegFineAdd() 10 1.938e-06 2.302e-06 2.593e-06 0.00% Amr::initialInit() 1 1.173e-06 1.638e-06 1.927e-06 0.00% DistributionMapping::Distribute() 1 9.88e-07 1.282e-06 1.777e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.641 3.642 3.642 100.00% Amr::coarseTimeStep() 10 3.419 3.419 3.419 93.88% Amr::timeStep() 10 3.409 3.41 3.41 93.63% Castro::advance() 10 3.393 3.394 3.394 93.18% Castro::subcycle_advance_ctu() 10 3.319 3.323 3.333 91.51% Castro::do_advance_ctu() 10 3.319 3.323 3.333 91.51% Castro::construct_ctu_hydro_source() 10 2.012 2.337 2.494 68.48% Gravity::make_radial_gravity() 21 0.3419 0.355 0.385 10.57% Castro::construct_old_gravity() 10 0.2043 0.2137 0.2363 6.49% Gravity::get_old_grav_vector() 10 0.2034 0.2129 0.2358 6.47% Gravity::get_new_grav_vector() 11 0.2286 0.2302 0.2318 6.37% FillPatchIterator::Initialize 41 0.1829 0.1907 0.2122 5.83% Castro::construct_new_gravity() 10 0.2054 0.2065 0.2084 5.72% Amr::init() 1 0.1916 0.1918 0.192 5.27% FillPatchSingleLevel 41 0.1338 0.1471 0.1865 5.12% Castro::initialize_do_advance() 10 0.1614 0.1729 0.1792 4.92% Amr::initialInit() 1 0.1776 0.178 0.1783 4.89% FabArray::ParallelCopy() 41 0.08655 0.1043 0.1511 4.15% Amr::InitializeInit() 1 0.05506 0.1069 0.151 4.15% Amr::defBaseLevel() 1 0.05506 0.1069 0.151 4.15% Castro::initData() 1 0.04137 0.09036 0.132 3.62% Castro::expand_state() 10 0.118 0.1261 0.1304 3.58% FabArray::ParallelCopy_finish() 41 0.03813 0.06096 0.1255 3.45% Castro::estTimeStep() 21 0.02855 0.07469 0.1243 3.41% Amr::FinalizeInit() 1 0.02702 0.0711 0.123 3.38% Castro::clean_state() 62 0.109 0.1167 0.1217 3.34% Castro::computeInitialDt() 2 0.001704 0.04589 0.09785 2.69% Castro::initialize_advance() 10 0.06027 0.0703 0.07414 2.04% Castro::computeTemp() 63 0.06338 0.06898 0.0723 1.99% FabArray::setVal() 143 0.05731 0.06773 0.07105 1.95% Castro::do_new_sources() 10 0.05264 0.06329 0.06588 1.81% Castro::reset_internal_energy(MultiFab) 63 0.04595 0.04992 0.05183 1.42% Castro::reset_internal_energy(Fab) 1008 0.04564 0.04962 0.05155 1.42% FabArray::ParallelCopy_nowait() 41 0.02547 0.04321 0.04925 1.35% Castro::do_old_sources() 10 0.0322 0.04512 0.04887 1.34% StateDataPhysBCFunct::() 41 0.03494 0.04275 0.04759 1.31% StateData::FillBoundary(geom) 41 0.03482 0.04261 0.04745 1.30% Castro::normalize_species() 62 0.04005 0.04183 0.04332 1.19% Amr::writePlotFile() 2 0.03857 0.03871 0.039 1.07% Castro::construct_new_source() 50 0.0251 0.02996 0.03168 0.87% Gravity::interpolate_monopole_grav() 21 0.02556 0.02734 0.02819 0.77% Castro::construct_new_gravity_source() 10 0.02033 0.02359 0.02493 0.68% Castro::post_init() 1 0.02392 0.02444 0.02467 0.68% Castro::post_timestep() 10 0.01584 0.01609 0.01622 0.45% Castro::apply_source_to_state() 20 0.008749 0.01432 0.0162 0.44% MultiFab::Saxpy() 20 0.008713 0.01427 0.01615 0.44% VisMF::Write(FabArray) 2 0.01095 0.01229 0.01592 0.44% FabArray::setDomainBndry() 41 0.006151 0.01154 0.01467 0.40% Castro::check_for_nan() 20 0.009419 0.01099 0.01239 0.34% MultiFab::contains_nan() 20 0.009398 0.01097 0.01236 0.34% Castro::Castro() 1 0.008568 0.01057 0.01228 0.34% Castro::construct_old_source() 50 0.005078 0.0101 0.01186 0.33% Castro::construct_old_gravity_source() 10 0.005047 0.01002 0.01176 0.32% Castro::initMFs() 1 0.005495 0.006901 0.008086 0.22% Castro::enforce_min_density() 62 0.005834 0.006675 0.007258 0.20% Castro::computeNewDt() 9 0.007014 0.007029 0.00704 0.19% AmrLevel::AmrLevel(dm) 1 0.004581 0.005669 0.006626 0.18% StateData::define() 4 0.004566 0.005653 0.006607 0.18% Castro::swap_state_time_levels() 10 0.00265 0.003633 0.003954 0.11% Castro::buildMetrics() 1 0.00141 0.001786 0.002117 0.06% Castro::post_regrid() 1 0.001515 0.001681 0.002031 0.06% Castro::finalize_do_advance() 10 0.0005336 0.001057 0.001237 0.03% Amr::InitAmr() 1 0.000279 0.0003946 0.0005942 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 1.723e-05 0.0002662 0.0003947 0.01% DistributionMapping::LeastUsedCPUs() 1 1.089e-05 0.0002602 0.0003882 0.01% Castro::enforce_consistent_e() 1 8.102e-05 8.908e-05 0.0001011 0.00% FabArrayBase::getCPC() 41 7.287e-05 8.094e-05 9.089e-05 0.00% Amr::writeSmallPlotFile() 1 2.992e-05 4.628e-05 7.08e-05 0.00% Castro::finalize_advance() 10 5.728e-05 6.329e-05 6.793e-05 0.00% Castro::enforce_speed_limit() 62 2.229e-05 2.608e-05 3.5e-05 0.00% FabArrayBase::CPC::define() 2 2.365e-05 2.738e-05 3.102e-05 0.00% Gravity::swapTimeLevels() 10 5.26e-06 1.246e-05 1.688e-05 0.00% Amr::initSubcycle() 1 7.773e-06 1.123e-05 1.515e-05 0.00% Castro::create_source_corrector() 10 6.265e-06 1.089e-05 1.333e-05 0.00% Gravity::set_mass_offset() 10 7.535e-06 1.005e-05 1.27e-05 0.00% Castro::FluxRegCrseInit 10 6.586e-06 8.804e-06 1.167e-05 0.00% Castro::retry_advance_ctu() 10 4.75e-06 6.127e-06 7.646e-06 0.00% Castro::FluxRegFineAdd() 10 1.938e-06 2.302e-06 2.593e-06 0.00% DistributionMapping::Distribute() 1 9.88e-07 1.282e-06 1.777e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-7-gff9e832483f1) finalized