MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-10-g18d0a2861d31) initialized Starting run at 01:01:38 UTC on 2022-06-08. Successfully read inputs file ... Castro git describe: 22.06-8-g07c40ca1e AMReX git describe: 22.06-10-g18d0a2861 Microphysics git describe: 22.06-1-gb8e427c1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013476594 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.34573716 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.336225757 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.3344418 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.334455001 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.334305676 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340073527 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.330676824 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.330235145 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.330437431 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.330113833 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009743881 seconds Ending run at 01:01:42 UTC on 2022-06-08. Run time = 3.554635368 Run time without initialization = 3.362937133 Average number of zones advanced per microsecond: 0.780 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.552 ... 3.554 ... 3.555 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0216 2.3282 2.4352 68.51% Castro::do_advance_ctu() 10 0.02889 0.1387 0.4484 12.61% Gravity::make_radial_gravity() 21 0.3386 0.3525 0.3806 10.71% Castro::initData() 1 0.0382 0.08042 0.1304 3.67% FabArray::ParallelCopy_finish() 41 0.03395 0.05354 0.1148 3.23% Castro::estTimeStep() 21 0.01917 0.07432 0.1138 3.20% FabArray::setVal() 143 0.05356 0.07019 0.07629 2.15% Castro::reset_internal_energy(Fab) 1008 0.04622 0.04956 0.05224 1.47% FabArray::ParallelCopy_nowait() 41 0.02839 0.04306 0.04837 1.36% StateData::FillBoundary(geom) 41 0.03439 0.04189 0.04615 1.30% Castro::normalize_species() 62 0.03886 0.04137 0.0426 1.20% FillPatchIterator::Initialize 41 0.01918 0.03187 0.03719 1.05% Gravity::interpolate_monopole_grav() 21 0.02553 0.02724 0.0279 0.78% Castro::construct_new_gravity_source() 10 0.01815 0.02297 0.0244 0.69% Castro::expand_state() 10 0.009379 0.01987 0.02314 0.65% Castro::computeTemp() 63 0.01716 0.01883 0.01998 0.56% Castro::initialize_do_advance() 10 0.01063 0.01642 0.01861 0.52% MultiFab::Saxpy() 20 0.01054 0.01466 0.01635 0.46% FabArray::setDomainBndry() 41 0.004992 0.01186 0.01509 0.42% VisMF::Write(FabArray) 2 0.01081 0.01159 0.01387 0.39% MultiFab::contains_nan() 20 0.009867 0.01128 0.01311 0.37% Gravity::get_new_grav_vector() 11 0.00898 0.0115 0.01264 0.36% Amr::writePlotFile() 2 0.009605 0.01179 0.01246 0.35% Castro::construct_old_gravity_source() 10 0.004894 0.01024 0.01194 0.34% Castro::initialize_advance() 10 0.01118 0.01137 0.01174 0.33% Gravity::get_old_grav_vector() 10 0.005378 0.009666 0.01104 0.31% Castro::construct_new_source() 50 0.004861 0.006507 0.007112 0.20% Castro::enforce_min_density() 62 0.00529 0.006066 0.006585 0.19% Castro::initMFs() 1 0.00545 0.005896 0.006329 0.18% main() 1 0.003542 0.005358 0.005774 0.16% StateData::define() 4 0.004506 0.004884 0.005035 0.14% Castro::swap_state_time_levels() 10 0.002968 0.003801 0.003993 0.11% Amr::coarseTimeStep() 10 0.0009814 0.001944 0.003992 0.11% Castro::buildMetrics() 1 0.001261 0.001395 0.001482 0.04% Castro::finalize_do_advance() 10 0.0004647 0.001099 0.001356 0.04% Amr::timeStep() 10 0.000173 0.000235 0.0005153 0.01% Amr::InitAmr() 1 0.0002541 0.0002985 0.0004216 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002745 0.0002995 0.0003264 0.01% Castro::clean_state() 62 0.0001437 0.0001653 0.000195 0.01% DistributionMapping::LeastUsedCPUs() 1 8.38e-06 0.0001392 0.0001745 0.00% StateDataPhysBCFunct::() 41 0.0001268 0.0001364 0.0001483 0.00% Amr::FinalizeInit() 1 3.94e-06 1.812e-05 0.0001115 0.00% Castro::enforce_consistent_e() 1 7.868e-05 8.681e-05 9.57e-05 0.00% Castro::construct_old_source() 50 3.218e-05 7.628e-05 9.478e-05 0.00% Castro::subcycle_advance_ctu() 10 3.661e-05 5.593e-05 8.65e-05 0.00% FabArray::ParallelCopy() 41 6.006e-05 7.771e-05 8.623e-05 0.00% Castro::Castro() 1 5.448e-05 6.445e-05 8.595e-05 0.00% Castro::do_new_sources() 10 3.98e-05 6.427e-05 7.991e-05 0.00% Castro::do_old_sources() 10 4.044e-05 6.624e-05 7.745e-05 0.00% FillPatchSingleLevel 41 5.796e-05 6.653e-05 7.329e-05 0.00% FabArrayBase::getCPC() 41 4.671e-05 5.642e-05 6.941e-05 0.00% Amr::writeSmallPlotFile() 1 3.046e-05 5.159e-05 6.797e-05 0.00% Castro::apply_source_to_state() 20 3.544e-05 4.755e-05 6.325e-05 0.00% Castro::construct_old_gravity() 10 3.432e-05 5.344e-05 6.226e-05 0.00% Castro::advance() 10 3.004e-05 4.411e-05 6.134e-05 0.00% Castro::finalize_advance() 10 4.614e-05 5.047e-05 5.37e-05 0.00% Castro::construct_new_gravity() 10 3.818e-05 4.578e-05 5.074e-05 0.00% Amr::defBaseLevel() 1 2.592e-05 2.963e-05 3.656e-05 0.00% Castro::enforce_speed_limit() 62 2.487e-05 2.867e-05 3.382e-05 0.00% FabArrayBase::CPC::define() 2 2.254e-05 2.679e-05 3.247e-05 0.00% Castro::post_timestep() 10 1.158e-05 1.867e-05 2.84e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.782e-05 2.212e-05 2.705e-05 0.00% Castro::check_for_nan() 20 2e-05 2.308e-05 2.644e-05 0.00% Castro::post_init() 1 8.074e-06 1.159e-05 1.556e-05 0.00% Gravity::swapTimeLevels() 10 7.388e-06 1.21e-05 1.499e-05 0.00% Gravity::set_mass_offset() 10 6.945e-06 1.045e-05 1.397e-05 0.00% Castro::create_source_corrector() 10 8.685e-06 1.118e-05 1.263e-05 0.00% Castro::computeNewDt() 9 7.598e-06 9.987e-06 1.236e-05 0.00% Castro::FluxRegCrseInit 10 6.718e-06 8.824e-06 1.082e-05 0.00% Amr::initSubcycle() 1 8.613e-06 9.387e-06 9.795e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.962e-06 5.034e-06 7.464e-06 0.00% Castro::retry_advance_ctu() 10 3.818e-06 5.527e-06 7.019e-06 0.00% Amr::InitializeInit() 1 2.027e-06 2.802e-06 6.771e-06 0.00% Castro::computeInitialDt() 2 3.839e-06 4.606e-06 5.381e-06 0.00% Castro::post_regrid() 1 1.651e-06 3.367e-06 4.737e-06 0.00% Amr::init() 1 1.883e-06 2.626e-06 3.344e-06 0.00% Castro::FluxRegFineAdd() 10 1.733e-06 2.17e-06 2.613e-06 0.00% Amr::initialInit() 1 1.174e-06 1.443e-06 1.589e-06 0.00% DistributionMapping::Distribute() 1 1.05e-06 1.226e-06 1.56e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.552 3.554 3.555 100.00% Amr::coarseTimeStep() 10 3.347 3.347 3.347 94.17% Amr::timeStep() 10 3.335 3.337 3.338 93.91% Castro::advance() 10 3.32 3.321 3.321 93.43% Castro::subcycle_advance_ctu() 10 3.244 3.248 3.259 91.67% Castro::do_advance_ctu() 10 3.244 3.248 3.259 91.67% Castro::construct_ctu_hydro_source() 10 2.022 2.328 2.435 68.51% Gravity::make_radial_gravity() 21 0.3386 0.3525 0.3806 10.71% Castro::construct_old_gravity() 10 0.2035 0.2149 0.2363 6.65% Gravity::get_old_grav_vector() 10 0.2025 0.214 0.2357 6.63% Gravity::get_new_grav_vector() 11 0.2264 0.228 0.2303 6.48% Castro::construct_new_gravity() 10 0.202 0.2035 0.2055 5.78% FillPatchIterator::Initialize 41 0.175 0.1826 0.2042 5.74% Amr::init() 1 0.1911 0.1913 0.1913 5.38% FillPatchSingleLevel 41 0.1243 0.1389 0.18 5.06% Amr::initialInit() 1 0.1775 0.1777 0.1779 5.01% Castro::initialize_do_advance() 10 0.1554 0.1661 0.171 4.81% Amr::InitializeInit() 1 0.05595 0.09925 0.1501 4.22% Amr::defBaseLevel() 1 0.05595 0.09924 0.1501 4.22% FabArray::ParallelCopy() 41 0.08077 0.09675 0.1434 4.03% Castro::initData() 1 0.0424 0.08432 0.1343 3.78% Amr::FinalizeInit() 1 0.02756 0.07849 0.122 3.43% Castro::expand_state() 10 0.1178 0.1194 0.1219 3.43% Castro::clean_state() 62 0.1075 0.1154 0.1202 3.38% FabArray::ParallelCopy_finish() 41 0.03395 0.05354 0.1148 3.23% Castro::estTimeStep() 21 0.01917 0.07432 0.1138 3.20% Castro::computeInitialDt() 2 0.00174 0.05259 0.09592 2.70% Castro::initialize_advance() 10 0.06148 0.07246 0.07707 2.17% FabArray::setVal() 143 0.05356 0.07019 0.07629 2.15% Castro::computeTemp() 63 0.06407 0.06869 0.07254 2.04% Castro::do_new_sources() 10 0.05145 0.06257 0.06573 1.85% Castro::reset_internal_energy(MultiFab) 63 0.04652 0.04986 0.05256 1.48% Castro::reset_internal_energy(Fab) 1008 0.04622 0.04956 0.05224 1.47% Castro::do_old_sources() 10 0.03395 0.04596 0.04952 1.39% FabArray::ParallelCopy_nowait() 41 0.02847 0.04314 0.04845 1.36% StateDataPhysBCFunct::() 41 0.03454 0.04203 0.04629 1.30% StateData::FillBoundary(geom) 41 0.03439 0.04189 0.04615 1.30% Castro::normalize_species() 62 0.03886 0.04137 0.0426 1.20% Castro::construct_new_source() 50 0.02301 0.02947 0.03134 0.88% Gravity::interpolate_monopole_grav() 21 0.02553 0.02724 0.0279 0.78% Castro::post_init() 1 0.02494 0.02519 0.02537 0.71% Castro::construct_new_gravity_source() 10 0.01815 0.02297 0.0244 0.69% Amr::writePlotFile() 2 0.02323 0.02338 0.02358 0.66% Castro::post_timestep() 10 0.01451 0.01599 0.01684 0.47% Castro::apply_source_to_state() 20 0.01059 0.0147 0.01642 0.46% MultiFab::Saxpy() 20 0.01054 0.01466 0.01635 0.46% FabArray::setDomainBndry() 41 0.004992 0.01186 0.01509 0.42% VisMF::Write(FabArray) 2 0.01081 0.01159 0.01387 0.39% Castro::check_for_nan() 20 0.009888 0.0113 0.01313 0.37% MultiFab::contains_nan() 20 0.009867 0.01128 0.01311 0.37% Castro::construct_old_source() 50 0.004926 0.01031 0.01203 0.34% Castro::construct_old_gravity_source() 10 0.004894 0.01024 0.01194 0.34% Castro::Castro() 1 0.008791 0.009845 0.01057 0.30% Castro::computeNewDt() 9 0.00739 0.007397 0.007405 0.21% Castro::enforce_min_density() 62 0.00529 0.006066 0.006585 0.19% Castro::initMFs() 1 0.00545 0.005896 0.006329 0.18% AmrLevel::AmrLevel(dm) 1 0.004524 0.004906 0.005061 0.14% StateData::define() 4 0.004506 0.004884 0.005035 0.14% Castro::swap_state_time_levels() 10 0.002968 0.003801 0.003993 0.11% Castro::post_regrid() 1 0.001572 0.001619 0.001669 0.05% Castro::buildMetrics() 1 0.001377 0.001533 0.001632 0.05% Castro::finalize_do_advance() 10 0.0004647 0.001099 0.001356 0.04% Amr::InitAmr() 1 0.0002627 0.0003079 0.0004314 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.379e-05 0.0001455 0.0001818 0.01% DistributionMapping::LeastUsedCPUs() 1 8.38e-06 0.0001392 0.0001745 0.00% Castro::enforce_consistent_e() 1 7.868e-05 8.681e-05 9.57e-05 0.00% FabArrayBase::getCPC() 41 7.407e-05 8.321e-05 9.567e-05 0.00% Amr::writeSmallPlotFile() 1 3.046e-05 5.159e-05 6.797e-05 0.00% Castro::finalize_advance() 10 5.486e-05 6.146e-05 6.703e-05 0.00% Castro::enforce_speed_limit() 62 2.487e-05 2.867e-05 3.382e-05 0.00% FabArrayBase::CPC::define() 2 2.254e-05 2.679e-05 3.247e-05 0.00% Gravity::swapTimeLevels() 10 7.388e-06 1.21e-05 1.499e-05 0.00% Gravity::set_mass_offset() 10 6.945e-06 1.045e-05 1.397e-05 0.00% Castro::create_source_corrector() 10 8.685e-06 1.118e-05 1.263e-05 0.00% Castro::FluxRegCrseInit 10 6.718e-06 8.824e-06 1.082e-05 0.00% Amr::initSubcycle() 1 8.613e-06 9.387e-06 9.795e-06 0.00% Castro::retry_advance_ctu() 10 3.818e-06 5.527e-06 7.019e-06 0.00% Castro::FluxRegFineAdd() 10 1.733e-06 2.17e-06 2.613e-06 0.00% DistributionMapping::Distribute() 1 1.05e-06 1.226e-06 1.56e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-10-g18d0a2861d31) finalized