MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-8-g8a1c76c0af89) initialized Starting run at 05:38:01 UTC on 2022-06-07. Successfully read inputs file ... Castro git describe: 22.06-4-gfbc287aee AMReX git describe: 22.06-8-g8a1c76c0a Microphysics git describe: 22.06-1-gb8e427c1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013705616 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.333373161 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.334232998 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.333252834 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.333974346 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.335916531 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.336946681 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.331331358 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.338961986 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33403268 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.330291718 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009619845 seconds Ending run at 05:38:05 UTC on 2022-06-07. Run time = 3.59612069 Run time without initialization = 3.357984916 Average number of zones advanced per microsecond: 0.781 Average number of zones advanced per microsecond per rank: 0.098 TinyProfiler total time across processes [min...avg...max]: 3.594 ... 3.596 ... 3.596 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1042 2.3480 2.4436 67.95% Gravity::make_radial_gravity() 21 0.3381 0.3518 0.3758 10.45% Castro::do_advance_ctu() 10 0.03059 0.1277 0.3742 10.41% Castro::initData() 1 0.03765 0.08662 0.1326 3.69% Castro::estTimeStep() 21 0.02107 0.06913 0.1169 3.25% FabArray::ParallelCopy_finish() 41 0.03394 0.05521 0.1116 3.10% FabArray::setVal() 143 0.05843 0.0649 0.06782 1.89% Castro::reset_internal_energy(Fab) 1008 0.04707 0.0499 0.05213 1.45% FabArray::ParallelCopy_nowait() 41 0.0261 0.0422 0.04852 1.35% Amr::InitAmr() 1 0.0002905 0.006066 0.04636 1.29% DistributionMapping::LeastUsedCPUs() 1 1.094e-05 0.04037 0.04616 1.28% StateData::FillBoundary(geom) 41 0.03694 0.042 0.04563 1.27% Castro::normalize_species() 62 0.04016 0.04153 0.04265 1.19% FillPatchIterator::Initialize 41 0.02014 0.03187 0.03651 1.02% Gravity::interpolate_monopole_grav() 21 0.02679 0.02758 0.02794 0.78% Castro::construct_new_gravity_source() 10 0.01978 0.02248 0.02355 0.65% Castro::expand_state() 10 0.009646 0.01833 0.02188 0.61% Castro::computeTemp() 63 0.01771 0.01881 0.01955 0.54% Castro::initialize_do_advance() 10 0.009169 0.01561 0.01796 0.50% MultiFab::Saxpy() 20 0.008932 0.01385 0.01598 0.44% FabArray::setDomainBndry() 41 0.005074 0.01201 0.0154 0.43% VisMF::Write(FabArray) 2 0.01114 0.01219 0.01455 0.40% Amr::writePlotFile() 2 0.008985 0.01129 0.01243 0.35% Gravity::get_new_grav_vector() 11 0.007278 0.01064 0.01206 0.34% MultiFab::contains_nan() 20 0.009403 0.01062 0.01177 0.33% Castro::construct_old_gravity_source() 10 0.005128 0.009561 0.01135 0.32% Gravity::get_old_grav_vector() 10 0.005488 0.009229 0.0108 0.30% Castro::initialize_advance() 10 0.003578 0.00719 0.0085 0.24% Castro::initMFs() 1 0.005436 0.006479 0.008304 0.23% Castro::construct_new_source() 50 0.004905 0.006366 0.007025 0.20% Castro::enforce_min_density() 62 0.005873 0.006538 0.007007 0.19% StateData::define() 4 0.00456 0.0054 0.006816 0.19% main() 1 0.003272 0.004753 0.005453 0.15% Castro::swap_state_time_levels() 10 0.002737 0.003441 0.003804 0.11% Amr::coarseTimeStep() 10 0.000753 0.001435 0.002674 0.07% Castro::buildMetrics() 1 0.0013 0.001541 0.001967 0.05% Castro::finalize_do_advance() 10 0.0006404 0.0008931 0.001019 0.03% Amr::timeStep() 10 0.0001678 0.0002289 0.0004617 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002678 0.0002899 0.0003157 0.01% Castro::clean_state() 62 0.0001197 0.0001514 0.0001701 0.00% StateDataPhysBCFunct::() 41 9.95e-05 0.000133 0.0001529 0.00% Castro::enforce_consistent_e() 1 7.783e-05 8.843e-05 0.0001128 0.00% FabArray::ParallelCopy() 41 5.916e-05 8.715e-05 0.0001001 0.00% Castro::construct_old_source() 50 2.849e-05 7.164e-05 9.053e-05 0.00% Amr::FinalizeInit() 1 3.462e-06 1.375e-05 7.71e-05 0.00% Castro::do_old_sources() 10 3.064e-05 6.238e-05 7.679e-05 0.00% Amr::writeSmallPlotFile() 1 2.465e-05 5.734e-05 7.599e-05 0.00% FillPatchSingleLevel 41 4.933e-05 6.631e-05 7.475e-05 0.00% Castro::do_new_sources() 10 3.866e-05 6.101e-05 7.428e-05 0.00% Castro::subcycle_advance_ctu() 10 3.187e-05 5.174e-05 7.173e-05 0.00% Castro::construct_old_gravity() 10 3.113e-05 5.454e-05 6.618e-05 0.00% Castro::Castro() 1 4.92e-05 5.668e-05 6.531e-05 0.00% Castro::advance() 10 2.71e-05 4.202e-05 6.107e-05 0.00% Castro::construct_new_gravity() 10 3.462e-05 4.635e-05 5.743e-05 0.00% FabArrayBase::getCPC() 41 4.536e-05 5.057e-05 5.74e-05 0.00% Castro::finalize_advance() 10 4.286e-05 4.976e-05 5.298e-05 0.00% Castro::apply_source_to_state() 20 2.736e-05 4.102e-05 5.099e-05 0.00% Amr::defBaseLevel() 1 2.804e-05 3.221e-05 4.059e-05 0.00% FabArrayBase::CPC::define() 2 2.314e-05 2.618e-05 3.07e-05 0.00% Castro::enforce_speed_limit() 62 1.924e-05 2.484e-05 3.06e-05 0.00% Castro::check_for_nan() 20 1.814e-05 2.353e-05 3.003e-05 0.00% Castro::post_timestep() 10 1.038e-05 1.508e-05 2.355e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.508e-05 1.726e-05 2.261e-05 0.00% Castro::post_init() 1 7.676e-06 1.13e-05 1.623e-05 0.00% Gravity::swapTimeLevels() 10 5.376e-06 1.158e-05 1.577e-05 0.00% Amr::initSubcycle() 1 8.242e-06 9.456e-06 1.346e-05 0.00% Castro::create_source_corrector() 10 6.719e-06 1.016e-05 1.279e-05 0.00% Gravity::set_mass_offset() 10 6.243e-06 9.829e-06 1.227e-05 0.00% Castro::computeNewDt() 9 7.823e-06 9.27e-06 1.12e-05 0.00% Castro::FluxRegCrseInit 10 6.502e-06 8.767e-06 1.072e-05 0.00% Amr::InitializeInit() 1 2.035e-06 3.051e-06 8.129e-06 0.00% Castro::post_regrid() 1 1.885e-06 3.032e-06 6.679e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.324e-06 5.091e-06 6.659e-06 0.00% Castro::retry_advance_ctu() 10 3.923e-06 5.152e-06 6.089e-06 0.00% Castro::computeInitialDt() 2 3.207e-06 3.973e-06 5.71e-06 0.00% Amr::init() 1 1.963e-06 2.384e-06 2.875e-06 0.00% Castro::FluxRegFineAdd() 10 1.92e-06 2.264e-06 2.687e-06 0.00% Amr::initialInit() 1 1.132e-06 1.378e-06 1.66e-06 0.00% DistributionMapping::Distribute() 1 1.18e-06 1.393e-06 1.622e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.594 3.596 3.596 100.00% Amr::coarseTimeStep() 10 3.343 3.343 3.343 92.96% Amr::timeStep() 10 3.332 3.333 3.334 92.71% Castro::advance() 10 3.317 3.317 3.317 92.24% Castro::subcycle_advance_ctu() 10 3.248 3.251 3.258 90.60% Castro::do_advance_ctu() 10 3.248 3.251 3.258 90.60% Castro::construct_ctu_hydro_source() 10 2.104 2.348 2.444 67.95% Gravity::make_radial_gravity() 21 0.3381 0.3518 0.3758 10.45% Amr::init() 1 0.1916 0.2319 0.2377 6.61% Castro::construct_old_gravity() 10 0.2012 0.212 0.2302 6.40% Gravity::get_old_grav_vector() 10 0.2003 0.2112 0.2297 6.39% Gravity::get_new_grav_vector() 11 0.2246 0.2268 0.2293 6.38% Amr::initialInit() 1 0.1777 0.2181 0.224 6.23% Castro::construct_new_gravity() 10 0.2021 0.2036 0.2057 5.72% FillPatchIterator::Initialize 41 0.1751 0.1837 0.2011 5.59% Amr::InitializeInit() 1 0.08807 0.1463 0.1976 5.50% Amr::defBaseLevel() 1 0.08807 0.1463 0.1976 5.50% FillPatchSingleLevel 41 0.1245 0.1398 0.1758 4.89% Castro::initialize_do_advance() 10 0.1556 0.1664 0.1726 4.80% FabArray::ParallelCopy() 41 0.08158 0.09758 0.1382 3.84% Castro::initData() 1 0.04153 0.09052 0.1363 3.79% Castro::expand_state() 10 0.1177 0.1208 0.1245 3.46% Amr::FinalizeInit() 1 0.02631 0.07182 0.123 3.42% Castro::clean_state() 62 0.1106 0.1163 0.1196 3.33% Castro::estTimeStep() 21 0.02107 0.06913 0.1169 3.25% FabArray::ParallelCopy_finish() 41 0.03394 0.05521 0.1116 3.10% Castro::computeInitialDt() 2 0.001706 0.04725 0.09836 2.74% Castro::computeTemp() 63 0.06532 0.069 0.07197 2.00% Castro::initialize_advance() 10 0.05838 0.06586 0.06896 1.92% FabArray::setVal() 143 0.05843 0.0649 0.06782 1.89% Castro::do_new_sources() 10 0.05359 0.06126 0.06428 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04733 0.05019 0.05242 1.46% Castro::reset_internal_energy(Fab) 1008 0.04707 0.0499 0.05213 1.45% FabArray::ParallelCopy_nowait() 41 0.02617 0.04228 0.04861 1.35% Castro::do_old_sources() 10 0.03304 0.0437 0.04776 1.33% Amr::InitAmr() 1 0.0002996 0.006076 0.04637 1.29% DistributionMapping::SFCProcessorMapDoIt() 1 1.705e-05 0.04038 0.04617 1.28% DistributionMapping::LeastUsedCPUs() 1 1.094e-05 0.04037 0.04616 1.28% StateDataPhysBCFunct::() 41 0.03704 0.04214 0.04578 1.27% StateData::FillBoundary(geom) 41 0.03694 0.042 0.04563 1.27% Castro::normalize_species() 62 0.04016 0.04153 0.04265 1.19% Castro::construct_new_source() 50 0.02468 0.02885 0.03026 0.84% Gravity::interpolate_monopole_grav() 21 0.02679 0.02758 0.02794 0.78% Castro::post_init() 1 0.02349 0.02387 0.02409 0.67% Amr::writePlotFile() 2 0.0233 0.02349 0.02369 0.66% Castro::construct_new_gravity_source() 10 0.01978 0.02248 0.02355 0.65% Castro::post_timestep() 10 0.01521 0.01614 0.01662 0.46% Castro::apply_source_to_state() 20 0.008959 0.0139 0.01602 0.45% MultiFab::Saxpy() 20 0.008932 0.01385 0.01598 0.44% FabArray::setDomainBndry() 41 0.005074 0.01201 0.0154 0.43% VisMF::Write(FabArray) 2 0.01114 0.01219 0.01455 0.40% Castro::Castro() 1 0.008498 0.009953 0.0121 0.34% Castro::check_for_nan() 20 0.009424 0.01064 0.01179 0.33% MultiFab::contains_nan() 20 0.009403 0.01062 0.01177 0.33% Castro::construct_old_source() 50 0.005164 0.009632 0.01144 0.32% Castro::construct_old_gravity_source() 10 0.005128 0.009561 0.01135 0.32% Castro::initMFs() 1 0.005436 0.006479 0.008304 0.23% Castro::computeNewDt() 9 0.007354 0.007359 0.00737 0.20% Castro::enforce_min_density() 62 0.005873 0.006538 0.007007 0.19% AmrLevel::AmrLevel(dm) 1 0.004579 0.005418 0.006832 0.19% StateData::define() 4 0.00456 0.0054 0.006816 0.19% Castro::swap_state_time_levels() 10 0.002737 0.003441 0.003804 0.11% Castro::buildMetrics() 1 0.001412 0.00169 0.002186 0.06% Castro::post_regrid() 1 0.001537 0.001608 0.001801 0.05% Castro::finalize_do_advance() 10 0.0006404 0.0008931 0.001019 0.03% Castro::enforce_consistent_e() 1 7.783e-05 8.843e-05 0.0001128 0.00% FabArrayBase::getCPC() 41 7.036e-05 7.676e-05 8.81e-05 0.00% Amr::writeSmallPlotFile() 1 2.465e-05 5.734e-05 7.599e-05 0.00% Castro::finalize_advance() 10 5.258e-05 6.079e-05 6.576e-05 0.00% FabArrayBase::CPC::define() 2 2.314e-05 2.618e-05 3.07e-05 0.00% Castro::enforce_speed_limit() 62 1.924e-05 2.484e-05 3.06e-05 0.00% Gravity::swapTimeLevels() 10 5.376e-06 1.158e-05 1.577e-05 0.00% Amr::initSubcycle() 1 8.242e-06 9.456e-06 1.346e-05 0.00% Castro::create_source_corrector() 10 6.719e-06 1.016e-05 1.279e-05 0.00% Gravity::set_mass_offset() 10 6.243e-06 9.829e-06 1.227e-05 0.00% Castro::FluxRegCrseInit 10 6.502e-06 8.767e-06 1.072e-05 0.00% Castro::retry_advance_ctu() 10 3.923e-06 5.152e-06 6.089e-06 0.00% Castro::FluxRegFineAdd() 10 1.92e-06 2.264e-06 2.687e-06 0.00% DistributionMapping::Distribute() 1 1.18e-06 1.393e-06 1.622e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-8-g8a1c76c0af89) finalized