MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-12-gc8f33c76fb8a) initialized Starting run at 22:41:34 UTC on 2022-06-08. Successfully read inputs file ... Castro git describe: 22.06-8-gecef26111 AMReX git describe: 22.06-12-gc8f33c76f Microphysics git describe: 22.06-1-gb8e427c1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014291072 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.3502979 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.338712639 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338110174 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.338877892 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.347156833 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.343933085 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.333646884 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.333303787 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.334506276 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.342700358 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.012835776 seconds Ending run at 22:41:37 UTC on 2022-06-08. Run time = 3.649230454 Run time without initialization = 3.421837455 Average number of zones advanced per microsecond: 0.766 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.648 ... 3.649 ... 3.649 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0758 2.3704 2.4671 67.60% Castro::do_advance_ctu() 10 0.03426 0.1324 0.4301 11.79% Gravity::make_radial_gravity() 21 0.3424 0.3583 0.3845 10.54% Castro::estTimeStep() 21 0.0426 0.1052 0.1607 4.40% Castro::initData() 1 0.03825 0.09094 0.1577 4.32% FabArray::ParallelCopy_finish() 41 0.04127 0.06137 0.131 3.59% FabArray::setVal() 143 0.05426 0.0669 0.06974 1.91% Castro::reset_internal_energy(Fab) 1008 0.04741 0.05022 0.05264 1.44% FabArray::ParallelCopy_nowait() 41 0.02511 0.04332 0.04963 1.36% StateData::FillBoundary(geom) 41 0.03526 0.04255 0.04657 1.28% Castro::normalize_species() 62 0.04109 0.04276 0.04633 1.27% FillPatchIterator::Initialize 41 0.01995 0.0325 0.03704 1.01% Gravity::interpolate_monopole_grav() 21 0.02637 0.02762 0.029 0.79% Castro::construct_new_gravity_source() 10 0.02063 0.02407 0.02742 0.75% Castro::expand_state() 10 0.009707 0.01774 0.02111 0.58% Castro::computeTemp() 63 0.01774 0.01912 0.02108 0.58% Castro::initialize_do_advance() 10 0.009062 0.01659 0.01857 0.51% Amr::writePlotFile() 2 0.01117 0.01543 0.01647 0.45% VisMF::Write(FabArray) 2 0.01149 0.01259 0.0163 0.45% MultiFab::Saxpy() 20 0.008725 0.0143 0.01618 0.44% FabArray::setDomainBndry() 41 0.006179 0.01145 0.01419 0.39% MultiFab::contains_nan() 20 0.01003 0.0116 0.01315 0.36% Gravity::get_new_grav_vector() 11 0.007096 0.01104 0.0123 0.34% Castro::construct_old_gravity_source() 10 0.004978 0.01009 0.01197 0.33% Gravity::get_old_grav_vector() 10 0.005289 0.009312 0.01085 0.30% Castro::initialize_advance() 10 0.003244 0.008743 0.01009 0.28% Castro::initMFs() 1 0.005543 0.006569 0.008418 0.23% Castro::construct_new_source() 50 0.004763 0.006468 0.00715 0.20% main() 1 0.006083 0.006341 0.006966 0.19% Castro::enforce_min_density() 62 0.005265 0.006173 0.006852 0.19% StateData::define() 4 0.00461 0.005272 0.006669 0.18% Amr::coarseTimeStep() 10 0.0009722 0.002463 0.004385 0.12% Castro::swap_state_time_levels() 10 0.003119 0.003746 0.003961 0.11% Castro::buildMetrics() 1 0.001288 0.001517 0.001914 0.05% Castro::finalize_do_advance() 10 0.00053 0.001097 0.001288 0.04% Amr::timeStep() 10 0.0001745 0.000237 0.0005306 0.01% Amr::InitAmr() 1 0.0002786 0.0003451 0.0004579 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002976 0.0003122 0.000355 0.01% Castro::clean_state() 62 0.0001698 0.0001879 0.0002119 0.01% DistributionMapping::LeastUsedCPUs() 1 7.589e-06 0.000137 0.000209 0.01% StateDataPhysBCFunct::() 41 0.0001005 0.0001352 0.000161 0.00% Castro::enforce_consistent_e() 1 7.943e-05 9.554e-05 0.0001293 0.00% Castro::construct_old_source() 50 3.322e-05 7.325e-05 9.1e-05 0.00% FabArray::ParallelCopy() 41 6.014e-05 7.845e-05 9.091e-05 0.00% Amr::writeSmallPlotFile() 1 4.316e-05 6.524e-05 9.067e-05 0.00% Castro::do_old_sources() 10 3.51e-05 6.489e-05 7.922e-05 0.00% Amr::FinalizeInit() 1 3.963e-06 1.452e-05 7.658e-05 0.00% Castro::subcycle_advance_ctu() 10 2.952e-05 5.321e-05 7.612e-05 0.00% Castro::do_new_sources() 10 4.125e-05 6.462e-05 7.556e-05 0.00% FillPatchSingleLevel 41 5.158e-05 6.296e-05 7.155e-05 0.00% Castro::construct_old_gravity() 10 3.188e-05 5.159e-05 6.614e-05 0.00% Castro::Castro() 1 5.265e-05 5.78e-05 6.428e-05 0.00% Castro::finalize_advance() 10 4.746e-05 5.176e-05 5.701e-05 0.00% FabArrayBase::getCPC() 41 4.926e-05 5.294e-05 5.633e-05 0.00% Castro::construct_new_gravity() 10 3.199e-05 4.506e-05 5.047e-05 0.00% Castro::apply_source_to_state() 20 3.076e-05 4.335e-05 5.002e-05 0.00% Castro::advance() 10 2.726e-05 4.021e-05 4.537e-05 0.00% Amr::defBaseLevel() 1 2.954e-05 3.448e-05 4.048e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.601e-05 2.563e-05 3.688e-05 0.00% Castro::check_for_nan() 20 2.155e-05 2.664e-05 3.168e-05 0.00% Castro::enforce_speed_limit() 62 2.277e-05 2.725e-05 3.116e-05 0.00% FabArrayBase::CPC::define() 2 2.2e-05 2.461e-05 2.733e-05 0.00% Castro::post_timestep() 10 1.49e-05 2.228e-05 2.601e-05 0.00% Gravity::swapTimeLevels() 10 7.277e-06 1.324e-05 1.723e-05 0.00% Castro::create_source_corrector() 10 6.009e-06 1.023e-05 1.521e-05 0.00% Amr::initSubcycle() 1 8.351e-06 1.093e-05 1.444e-05 0.00% Castro::computeNewDt() 9 8.157e-06 9.919e-06 1.225e-05 0.00% Gravity::set_mass_offset() 10 7.861e-06 1.045e-05 1.215e-05 0.00% Castro::FluxRegCrseInit 10 6.118e-06 9.717e-06 1.206e-05 0.00% Castro::post_init() 1 6.257e-06 9.033e-06 1.18e-05 0.00% Castro::retry_advance_ctu() 10 3.858e-06 5.682e-06 7.493e-06 0.00% Amr::InitializeInit() 1 2.022e-06 3.069e-06 7.347e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.122e-06 5.188e-06 7.108e-06 0.00% Castro::post_regrid() 1 1.905e-06 3.703e-06 5.91e-06 0.00% Castro::computeInitialDt() 2 3.548e-06 4.658e-06 5.64e-06 0.00% Amr::init() 1 2.048e-06 2.332e-06 2.709e-06 0.00% Castro::FluxRegFineAdd() 10 1.756e-06 2.188e-06 2.689e-06 0.00% Amr::initialInit() 1 1.092e-06 1.407e-06 1.793e-06 0.00% DistributionMapping::Distribute() 1 9.55e-07 1.239e-06 1.485e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.648 3.649 3.649 100.00% Amr::coarseTimeStep() 10 3.402 3.402 3.402 93.22% Amr::timeStep() 10 3.389 3.391 3.392 92.96% Castro::advance() 10 3.374 3.374 3.374 92.47% Castro::subcycle_advance_ctu() 10 3.303 3.306 3.319 90.95% Castro::do_advance_ctu() 10 3.303 3.306 3.319 90.94% Castro::construct_ctu_hydro_source() 10 2.076 2.37 2.467 67.60% Gravity::make_radial_gravity() 21 0.3424 0.3583 0.3845 10.54% Gravity::get_new_grav_vector() 11 0.231 0.2353 0.237 6.49% Castro::construct_old_gravity() 10 0.1984 0.213 0.2321 6.36% Gravity::get_old_grav_vector() 10 0.1975 0.2122 0.2316 6.35% Amr::init() 1 0.2268 0.2269 0.227 6.22% FillPatchIterator::Initialize 41 0.1827 0.1915 0.2178 5.97% Amr::initialInit() 1 0.2116 0.2119 0.2123 5.82% Castro::construct_new_gravity() 10 0.2051 0.2088 0.2103 5.76% FillPatchSingleLevel 41 0.1321 0.1476 0.1917 5.25% Amr::InitializeInit() 1 0.05581 0.1107 0.1819 4.99% Amr::defBaseLevel() 1 0.05581 0.1107 0.1819 4.99% Castro::initialize_do_advance() 10 0.158 0.1722 0.1811 4.96% Castro::initData() 1 0.04207 0.09516 0.1631 4.47% Castro::estTimeStep() 21 0.0426 0.1052 0.1607 4.40% FabArray::ParallelCopy() 41 0.08958 0.1048 0.1563 4.28% Amr::FinalizeInit() 1 0.02989 0.1012 0.1559 4.27% Castro::expand_state() 10 0.1142 0.1251 0.1323 3.63% FabArray::ParallelCopy_finish() 41 0.04127 0.06137 0.131 3.59% Castro::computeInitialDt() 2 0.002205 0.0736 0.1285 3.52% Castro::clean_state() 62 0.1109 0.1178 0.1261 3.46% Castro::computeTemp() 63 0.06547 0.06965 0.07408 2.03% Castro::initialize_advance() 10 0.05474 0.06821 0.07146 1.96% Castro::do_new_sources() 10 0.05379 0.06406 0.07018 1.92% FabArray::setVal() 143 0.05426 0.0669 0.06974 1.91% Castro::reset_internal_energy(MultiFab) 63 0.04771 0.05053 0.05299 1.45% Castro::reset_internal_energy(Fab) 1008 0.04741 0.05022 0.05264 1.44% Castro::do_old_sources() 10 0.03213 0.04518 0.0501 1.37% FabArray::ParallelCopy_nowait() 41 0.02518 0.0434 0.04971 1.36% StateDataPhysBCFunct::() 41 0.03536 0.04268 0.04672 1.28% StateData::FillBoundary(geom) 41 0.03526 0.04255 0.04657 1.28% Castro::normalize_species() 62 0.04109 0.04276 0.04633 1.27% Castro::construct_new_source() 50 0.02539 0.03054 0.03457 0.95% Gravity::interpolate_monopole_grav() 21 0.02637 0.02762 0.029 0.79% Amr::writePlotFile() 2 0.02747 0.02802 0.02832 0.78% Castro::post_init() 1 0.02711 0.0273 0.02763 0.76% Castro::construct_new_gravity_source() 10 0.02063 0.02407 0.02742 0.75% Castro::post_timestep() 10 0.01502 0.01633 0.0175 0.48% VisMF::Write(FabArray) 2 0.01149 0.01259 0.0163 0.45% Castro::apply_source_to_state() 20 0.008756 0.01434 0.01623 0.44% MultiFab::Saxpy() 20 0.008725 0.0143 0.01618 0.44% FabArray::setDomainBndry() 41 0.006179 0.01145 0.01419 0.39% Castro::check_for_nan() 20 0.01005 0.01163 0.01317 0.36% MultiFab::contains_nan() 20 0.01003 0.0116 0.01315 0.36% Castro::Castro() 1 0.008842 0.01003 0.0121 0.33% Castro::construct_old_source() 50 0.005011 0.01016 0.01206 0.33% Castro::construct_old_gravity_source() 10 0.004978 0.01009 0.01197 0.33% Castro::initMFs() 1 0.005543 0.006569 0.008418 0.23% Castro::computeNewDt() 9 0.007369 0.007381 0.007386 0.20% Castro::enforce_min_density() 62 0.005265 0.006173 0.006852 0.19% AmrLevel::AmrLevel(dm) 1 0.004634 0.005297 0.006706 0.18% StateData::define() 4 0.00461 0.005272 0.006669 0.18% Castro::swap_state_time_levels() 10 0.003119 0.003746 0.003961 0.11% Castro::buildMetrics() 1 0.001401 0.001665 0.00212 0.06% Castro::post_regrid() 1 0.001502 0.001645 0.00197 0.05% Castro::finalize_do_advance() 10 0.00053 0.001097 0.001288 0.04% Amr::InitAmr() 1 0.0002875 0.000356 0.0004721 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.386e-05 0.0001434 0.0002172 0.01% DistributionMapping::LeastUsedCPUs() 1 7.589e-06 0.000137 0.000209 0.01% Castro::enforce_consistent_e() 1 7.943e-05 9.554e-05 0.0001293 0.00% Amr::writeSmallPlotFile() 1 4.316e-05 6.524e-05 9.067e-05 0.00% FabArrayBase::getCPC() 41 7.351e-05 7.756e-05 8.115e-05 0.00% Castro::finalize_advance() 10 5.556e-05 6.367e-05 7e-05 0.00% Castro::enforce_speed_limit() 62 2.277e-05 2.725e-05 3.116e-05 0.00% FabArrayBase::CPC::define() 2 2.2e-05 2.461e-05 2.733e-05 0.00% Gravity::swapTimeLevels() 10 7.277e-06 1.324e-05 1.723e-05 0.00% Castro::create_source_corrector() 10 6.009e-06 1.023e-05 1.521e-05 0.00% Amr::initSubcycle() 1 8.351e-06 1.093e-05 1.444e-05 0.00% Gravity::set_mass_offset() 10 7.861e-06 1.045e-05 1.215e-05 0.00% Castro::FluxRegCrseInit 10 6.118e-06 9.717e-06 1.206e-05 0.00% Castro::retry_advance_ctu() 10 3.858e-06 5.682e-06 7.493e-06 0.00% Castro::FluxRegFineAdd() 10 1.756e-06 2.188e-06 2.689e-06 0.00% DistributionMapping::Distribute() 1 9.55e-07 1.239e-06 1.485e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-12-gc8f33c76fb8a) finalized