MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-10-g18d0a2861d31) initialized Starting run at 05:38:39 UTC on 2022-06-08. Successfully read inputs file ... Castro git describe: 22.06-7-g014ddc814 AMReX git describe: 22.06-10-g18d0a2861 Microphysics git describe: 22.06-1-gb8e427c1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014059561 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.349151669 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.33608012 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.334398152 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.339797609 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.33888266 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.340232833 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.331867344 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.330461777 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.330998045 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.330114545 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009730299 seconds Ending run at 05:38:42 UTC on 2022-06-08. Run time = 3.565777412 Run time without initialization = 3.377603016 Average number of zones advanced per microsecond: 0.776 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.564 ... 3.566 ... 3.566 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0339 2.3343 2.4438 68.54% Castro::do_advance_ctu() 10 0.02981 0.1422 0.4463 12.52% Gravity::make_radial_gravity() 21 0.3408 0.3535 0.3744 10.50% Castro::initData() 1 0.03958 0.0809 0.1262 3.54% Castro::estTimeStep() 21 0.02923 0.06866 0.1138 3.19% FabArray::ParallelCopy_finish() 41 0.03327 0.05199 0.1035 2.90% FabArray::setVal() 143 0.06026 0.07188 0.07652 2.15% Castro::reset_internal_energy(Fab) 1008 0.04645 0.04937 0.05164 1.45% FabArray::ParallelCopy_nowait() 41 0.03023 0.04387 0.04961 1.39% StateData::FillBoundary(geom) 41 0.03391 0.04192 0.04667 1.31% Castro::normalize_species() 62 0.04 0.04164 0.04359 1.22% FillPatchIterator::Initialize 41 0.01987 0.03221 0.03691 1.04% Gravity::interpolate_monopole_grav() 21 0.02601 0.02746 0.02817 0.79% Castro::construct_new_gravity_source() 10 0.02112 0.02385 0.02525 0.71% Castro::expand_state() 10 0.0121 0.02032 0.02282 0.64% Castro::computeTemp() 63 0.01759 0.01874 0.01973 0.55% Castro::initialize_do_advance() 10 0.009686 0.01685 0.01961 0.55% MultiFab::Saxpy() 20 0.01171 0.01501 0.01673 0.47% VisMF::Write(FabArray) 2 0.0109 0.01208 0.01605 0.45% FabArray::setDomainBndry() 41 0.005995 0.01219 0.01539 0.43% MultiFab::contains_nan() 20 0.01068 0.01173 0.01379 0.39% Gravity::get_new_grav_vector() 11 0.009527 0.01195 0.01319 0.37% Amr::writePlotFile() 2 0.007952 0.0119 0.01301 0.36% Castro::construct_old_gravity_source() 10 0.006203 0.01063 0.01234 0.35% Gravity::get_old_grav_vector() 10 0.007727 0.01018 0.01164 0.33% Castro::initialize_advance() 10 0.01112 0.01131 0.01157 0.32% Castro::construct_new_source() 50 0.00515 0.006607 0.007161 0.20% Castro::initMFs() 1 0.005438 0.005784 0.006772 0.19% Castro::enforce_min_density() 62 0.005467 0.006154 0.006728 0.19% StateData::define() 4 0.004661 0.004803 0.005192 0.15% main() 1 0.003438 0.004844 0.005177 0.15% Castro::swap_state_time_levels() 10 0.00302 0.003936 0.004084 0.11% Amr::coarseTimeStep() 10 0.001023 0.001429 0.001778 0.05% Castro::finalize_do_advance() 10 0.001143 0.001508 0.001708 0.05% Castro::buildMetrics() 1 0.001288 0.00134 0.001434 0.04% Amr::timeStep() 10 0.0001746 0.0002325 0.0004558 0.01% Amr::InitAmr() 1 0.0002573 0.0002844 0.0004285 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002682 0.0003002 0.0003396 0.01% DistributionMapping::LeastUsedCPUs() 1 8.157e-06 0.0001658 0.0001919 0.01% StateDataPhysBCFunct::() 41 9.321e-05 0.0001592 0.0001884 0.01% Castro::clean_state() 62 0.0001376 0.0001621 0.0001832 0.01% FabArray::ParallelCopy() 41 5.845e-05 8.908e-05 0.0001081 0.00% Castro::construct_old_source() 50 3.956e-05 7.227e-05 9.286e-05 0.00% Castro::enforce_consistent_e() 1 7.695e-05 8.738e-05 9.271e-05 0.00% Castro::do_new_sources() 10 3.853e-05 6.638e-05 8.64e-05 0.00% Castro::do_old_sources() 10 4.089e-05 6.535e-05 8.553e-05 0.00% Amr::FinalizeInit() 1 4.294e-06 1.45e-05 7.957e-05 0.00% FillPatchSingleLevel 41 5.51e-05 6.877e-05 7.38e-05 0.00% Castro::construct_old_gravity() 10 3.596e-05 5.451e-05 6.775e-05 0.00% Castro::Castro() 1 5.024e-05 5.962e-05 6.771e-05 0.00% Castro::subcycle_advance_ctu() 10 4.033e-05 5.02e-05 6.601e-05 0.00% Castro::advance() 10 2.752e-05 4.179e-05 6.38e-05 0.00% FabArrayBase::getCPC() 41 4.104e-05 5.208e-05 6.024e-05 0.00% Amr::writeSmallPlotFile() 1 2.387e-05 5.008e-05 5.92e-05 0.00% Castro::finalize_advance() 10 4.4e-05 5.026e-05 5.334e-05 0.00% Castro::apply_source_to_state() 20 2.716e-05 4.526e-05 5.32e-05 0.00% Castro::construct_new_gravity() 10 3.807e-05 4.771e-05 5.256e-05 0.00% Amr::defBaseLevel() 1 2.862e-05 3.84e-05 5.106e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.742e-05 2.696e-05 4.187e-05 0.00% Castro::post_timestep() 10 1.481e-05 2.719e-05 4.111e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.809e-05 3.996e-05 0.00% Castro::enforce_speed_limit() 62 2e-05 2.787e-05 3.159e-05 0.00% Castro::check_for_nan() 20 2.064e-05 2.405e-05 2.755e-05 0.00% Gravity::swapTimeLevels() 10 8.81e-06 1.262e-05 1.866e-05 0.00% Gravity::set_mass_offset() 10 6.165e-06 1.107e-05 1.645e-05 0.00% Castro::post_init() 1 8.494e-06 1.045e-05 1.519e-05 0.00% Castro::create_source_corrector() 10 7.35e-06 1.038e-05 1.252e-05 0.00% Castro::computeNewDt() 9 7.678e-06 1.054e-05 1.185e-05 0.00% Castro::FluxRegCrseInit 10 6.713e-06 1.015e-05 1.149e-05 0.00% Amr::initSubcycle() 1 7.969e-06 8.796e-06 9.905e-06 0.00% Castro::retry_advance_ctu() 10 4.42e-06 5.906e-06 7.043e-06 0.00% Amr::InitializeInit() 1 1.982e-06 2.936e-06 6.647e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.869e-06 4.556e-06 6.559e-06 0.00% Castro::post_regrid() 1 1.742e-06 3.201e-06 5.783e-06 0.00% Castro::computeInitialDt() 2 3.046e-06 4.585e-06 5.237e-06 0.00% Amr::init() 1 1.846e-06 2.352e-06 2.944e-06 0.00% Castro::FluxRegFineAdd() 10 1.959e-06 2.19e-06 2.379e-06 0.00% DistributionMapping::Distribute() 1 1.221e-06 1.324e-06 1.503e-06 0.00% Amr::initialInit() 1 1.173e-06 1.305e-06 1.496e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.564 3.566 3.566 100.00% Amr::coarseTimeStep() 10 3.363 3.363 3.363 94.31% Amr::timeStep() 10 3.353 3.353 3.354 94.05% Castro::advance() 10 3.337 3.337 3.338 93.60% Castro::subcycle_advance_ctu() 10 3.26 3.265 3.276 91.88% Castro::do_advance_ctu() 10 3.26 3.264 3.276 91.88% Castro::construct_ctu_hydro_source() 10 2.034 2.334 2.444 68.54% Gravity::make_radial_gravity() 21 0.3408 0.3535 0.3744 10.50% Gravity::get_new_grav_vector() 11 0.2299 0.2317 0.2331 6.54% Castro::construct_old_gravity() 10 0.2033 0.2133 0.2283 6.40% Gravity::get_old_grav_vector() 10 0.2024 0.2123 0.2272 6.37% Castro::construct_new_gravity() 10 0.2057 0.2072 0.2086 5.85% FillPatchIterator::Initialize 41 0.1739 0.1826 0.1957 5.49% Amr::init() 1 0.1876 0.1878 0.1878 5.27% Amr::initialInit() 1 0.1733 0.1736 0.1738 4.87% Castro::initialize_do_advance() 10 0.1588 0.168 0.173 4.85% FillPatchSingleLevel 41 0.1235 0.1382 0.1698 4.76% Amr::InitializeInit() 1 0.05838 0.09984 0.1459 4.09% Amr::defBaseLevel() 1 0.05838 0.09984 0.1459 4.09% FabArray::ParallelCopy() 41 0.08179 0.09602 0.1339 3.75% Castro::initData() 1 0.04386 0.085 0.1299 3.64% Castro::expand_state() 10 0.1168 0.1209 0.1244 3.49% Castro::clean_state() 62 0.1092 0.1155 0.1211 3.40% Amr::FinalizeInit() 1 0.02773 0.07374 0.1152 3.23% Castro::estTimeStep() 21 0.02923 0.06866 0.1138 3.19% FabArray::ParallelCopy_finish() 41 0.03327 0.05199 0.1035 2.90% Castro::computeInitialDt() 2 0.001737 0.04782 0.08931 2.50% Castro::initialize_advance() 10 0.06047 0.07267 0.07708 2.16% FabArray::setVal() 143 0.06026 0.07188 0.07652 2.15% Castro::computeTemp() 63 0.06444 0.06842 0.07161 2.01% Castro::do_new_sources() 10 0.05684 0.06424 0.06722 1.89% Castro::reset_internal_energy(MultiFab) 63 0.04672 0.04967 0.05193 1.46% Castro::reset_internal_energy(Fab) 1008 0.04645 0.04937 0.05164 1.45% Castro::do_old_sources() 10 0.04077 0.04734 0.05012 1.41% FabArray::ParallelCopy_nowait() 41 0.03032 0.04395 0.04968 1.39% StateDataPhysBCFunct::() 41 0.03401 0.04208 0.04686 1.31% StateData::FillBoundary(geom) 41 0.03391 0.04192 0.04667 1.31% Castro::normalize_species() 62 0.04 0.04164 0.04359 1.22% Castro::construct_new_source() 50 0.02639 0.03046 0.03225 0.90% Gravity::interpolate_monopole_grav() 21 0.02601 0.02746 0.02817 0.79% Castro::post_init() 1 0.02489 0.0252 0.0254 0.71% Castro::construct_new_gravity_source() 10 0.02112 0.02385 0.02525 0.71% Amr::writePlotFile() 2 0.0238 0.02398 0.02431 0.68% Castro::apply_source_to_state() 20 0.01175 0.01505 0.01678 0.47% MultiFab::Saxpy() 20 0.01171 0.01501 0.01673 0.47% Castro::post_timestep() 10 0.01549 0.0158 0.01618 0.45% VisMF::Write(FabArray) 2 0.0109 0.01208 0.01605 0.45% FabArray::setDomainBndry() 41 0.005995 0.01219 0.01539 0.43% Castro::check_for_nan() 20 0.0107 0.01175 0.01381 0.39% MultiFab::contains_nan() 20 0.01068 0.01173 0.01379 0.39% Castro::construct_old_source() 50 0.006243 0.0107 0.01243 0.35% Castro::construct_old_gravity_source() 10 0.006203 0.01063 0.01234 0.35% Castro::Castro() 1 0.009392 0.009801 0.01059 0.30% Castro::computeNewDt() 9 0.007042 0.00705 0.007063 0.20% Castro::initMFs() 1 0.005438 0.005784 0.006772 0.19% Castro::enforce_min_density() 62 0.005467 0.006154 0.006728 0.19% AmrLevel::AmrLevel(dm) 1 0.00469 0.00483 0.005234 0.15% StateData::define() 4 0.004661 0.004803 0.005192 0.15% Castro::swap_state_time_levels() 10 0.00302 0.003936 0.004084 0.11% Castro::finalize_do_advance() 10 0.001143 0.001508 0.001708 0.05% Castro::post_regrid() 1 0.001578 0.001627 0.001708 0.05% Castro::buildMetrics() 1 0.001413 0.001477 0.00158 0.04% Amr::InitAmr() 1 0.0002671 0.0002932 0.0004384 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.394e-05 0.0001717 0.0001988 0.01% DistributionMapping::LeastUsedCPUs() 1 8.157e-06 0.0001658 0.0001919 0.01% Castro::enforce_consistent_e() 1 7.695e-05 8.738e-05 9.271e-05 0.00% FabArrayBase::getCPC() 41 6.799e-05 8.017e-05 9.163e-05 0.00% Castro::finalize_advance() 10 5.296e-05 6.259e-05 6.601e-05 0.00% Amr::writeSmallPlotFile() 1 2.387e-05 5.008e-05 5.92e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.809e-05 3.996e-05 0.00% Castro::enforce_speed_limit() 62 2e-05 2.787e-05 3.159e-05 0.00% Gravity::swapTimeLevels() 10 8.81e-06 1.262e-05 1.866e-05 0.00% Gravity::set_mass_offset() 10 6.165e-06 1.107e-05 1.645e-05 0.00% Castro::create_source_corrector() 10 7.35e-06 1.038e-05 1.252e-05 0.00% Castro::FluxRegCrseInit 10 6.713e-06 1.015e-05 1.149e-05 0.00% Amr::initSubcycle() 1 7.969e-06 8.796e-06 9.905e-06 0.00% Castro::retry_advance_ctu() 10 4.42e-06 5.906e-06 7.043e-06 0.00% Castro::FluxRegFineAdd() 10 1.959e-06 2.19e-06 2.379e-06 0.00% DistributionMapping::Distribute() 1 1.221e-06 1.324e-06 1.503e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-10-g18d0a2861d31) finalized