MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-20-g74183fe377df) initialized Starting run at 05:38:04 UTC on 2022-06-13. Successfully read inputs file ... Castro git describe: 22.06-12-g556652b03 AMReX git describe: 22.06-20-g74183fe37 Microphysics git describe: 22.06-1-gb8e427c1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01362643 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.351332403 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.338816328 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338084092 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337352828 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.337719346 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.345466041 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.332603121 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.332855091 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.333129714 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.332584378 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009670691 seconds Ending run at 05:38:08 UTC on 2022-06-13. Run time = 3.571134408 Run time without initialization = 3.395597313 Average number of zones advanced per microsecond: 0.772 Average number of zones advanced per microsecond per rank: 0.097 TinyProfiler total time across processes [min...avg...max]: 3.569 ... 3.571 ... 3.571 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0424 2.3513 2.4621 68.94% Castro::do_advance_ctu() 10 0.03103 0.143 0.4558 12.76% Gravity::make_radial_gravity() 21 0.339 0.3526 0.3772 10.56% Castro::initData() 1 0.03844 0.07789 0.1144 3.20% Castro::estTimeStep() 21 0.02175 0.06007 0.1093 3.06% FabArray::ParallelCopy_finish() 41 0.03171 0.05449 0.1085 3.04% FabArray::setVal() 143 0.0618 0.07139 0.07587 2.12% Castro::reset_internal_energy(Fab) 1008 0.04525 0.04981 0.05195 1.45% FabArray::ParallelCopy_nowait() 41 0.02971 0.04336 0.04831 1.35% StateData::FillBoundary(geom) 41 0.03611 0.04203 0.04649 1.30% Castro::normalize_species() 62 0.03875 0.04151 0.04368 1.22% FillPatchIterator::Initialize 41 0.0198 0.03255 0.03743 1.05% Gravity::interpolate_monopole_grav() 21 0.0255 0.02727 0.02794 0.78% Castro::construct_new_gravity_source() 10 0.02012 0.02366 0.02521 0.71% Castro::expand_state() 10 0.009545 0.01878 0.02218 0.62% Castro::computeTemp() 63 0.01728 0.01904 0.01979 0.55% Castro::initialize_do_advance() 10 0.008904 0.01658 0.01923 0.54% MultiFab::Saxpy() 20 0.01155 0.01514 0.01677 0.47% FabArray::setDomainBndry() 41 0.005012 0.01228 0.01552 0.43% VisMF::Write(FabArray) 2 0.01133 0.01189 0.01422 0.40% MultiFab::contains_nan() 20 0.0107 0.01193 0.01357 0.38% Gravity::get_new_grav_vector() 11 0.009394 0.01179 0.0131 0.37% Amr::writePlotFile() 2 0.009315 0.01174 0.01235 0.35% Castro::construct_old_gravity_source() 10 0.005675 0.0105 0.01225 0.34% Castro::initialize_advance() 10 0.01121 0.01137 0.01152 0.32% Gravity::get_old_grav_vector() 10 0.007407 0.009889 0.01104 0.31% Castro::construct_new_source() 50 0.005205 0.006614 0.007177 0.20% Castro::initMFs() 1 0.005515 0.005844 0.006924 0.19% Castro::enforce_min_density() 62 0.005358 0.006126 0.00664 0.19% main() 1 0.003505 0.004776 0.005326 0.15% StateData::define() 4 0.004645 0.004804 0.005186 0.15% Castro::swap_state_time_levels() 10 0.00308 0.003977 0.004151 0.12% Amr::coarseTimeStep() 10 0.0008176 0.001635 0.00383 0.11% Castro::buildMetrics() 1 0.001314 0.001371 0.001514 0.04% Castro::finalize_do_advance() 10 0.0004712 0.001084 0.001358 0.04% Amr::timeStep() 10 0.0001786 0.0002483 0.0004736 0.01% Amr::InitAmr() 1 0.0002549 0.0002868 0.0004112 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002977 0.000314 0.0003285 0.01% StateDataPhysBCFunct::() 41 0.0001295 0.0001597 0.0001952 0.01% Castro::clean_state() 62 0.0001526 0.0001689 0.000186 0.01% DistributionMapping::LeastUsedCPUs() 1 7.625e-06 0.0001429 0.0001732 0.00% FabArray::ParallelCopy() 41 8.308e-05 9.631e-05 0.0001113 0.00% Castro::construct_old_source() 50 4.122e-05 7.86e-05 0.0001002 0.00% Castro::Castro() 1 5.08e-05 7.734e-05 9.673e-05 0.00% Castro::do_new_sources() 10 5.058e-05 7.524e-05 9.631e-05 0.00% Castro::enforce_consistent_e() 1 8.408e-05 8.906e-05 9.624e-05 0.00% Castro::do_old_sources() 10 4.689e-05 7.088e-05 8.302e-05 0.00% FillPatchSingleLevel 41 6.988e-05 7.157e-05 7.372e-05 0.00% Castro::construct_old_gravity() 10 4.183e-05 5.51e-05 7.345e-05 0.00% Amr::writeSmallPlotFile() 1 2.578e-05 4.921e-05 7.197e-05 0.00% Amr::FinalizeInit() 1 3.862e-06 1.299e-05 7.125e-05 0.00% Castro::subcycle_advance_ctu() 10 4.379e-05 5.247e-05 6.914e-05 0.00% Castro::apply_source_to_state() 20 4.357e-05 5.123e-05 6.488e-05 0.00% FabArrayBase::getCPC() 41 4.628e-05 5.389e-05 6.316e-05 0.00% Castro::finalize_advance() 10 4.862e-05 5.15e-05 5.358e-05 0.00% Castro::construct_new_gravity() 10 3.994e-05 4.586e-05 5.011e-05 0.00% Castro::advance() 10 3.266e-05 4.269e-05 4.95e-05 0.00% Amr::defBaseLevel() 1 2.465e-05 2.978e-05 3.706e-05 0.00% FabArrayBase::CPC::define() 2 2.322e-05 2.856e-05 3.339e-05 0.00% Castro::enforce_speed_limit() 62 2.249e-05 2.581e-05 3.021e-05 0.00% Castro::check_for_nan() 20 2.335e-05 2.532e-05 2.779e-05 0.00% Castro::post_timestep() 10 1.275e-05 1.758e-05 2.521e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.713e-05 1.821e-05 2.11e-05 0.00% Gravity::set_mass_offset() 10 6.679e-06 1.039e-05 1.714e-05 0.00% Gravity::swapTimeLevels() 10 7.583e-06 1.263e-05 1.634e-05 0.00% Castro::create_source_corrector() 10 7.447e-06 1.19e-05 1.445e-05 0.00% Castro::post_init() 1 8.363e-06 1.076e-05 1.305e-05 0.00% Castro::computeNewDt() 9 7.418e-06 9.052e-06 1.116e-05 0.00% Castro::FluxRegCrseInit 10 6.896e-06 8.806e-06 1.029e-05 0.00% Amr::initSubcycle() 1 8.271e-06 9.043e-06 9.852e-06 0.00% Amr::InitializeInit() 1 1.961e-06 2.777e-06 6.958e-06 0.00% Castro::retry_advance_ctu() 10 3.734e-06 5.511e-06 6.789e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.834e-06 4.427e-06 5.858e-06 0.00% Castro::computeInitialDt() 2 3.465e-06 3.952e-06 5.083e-06 0.00% Castro::post_regrid() 1 1.844e-06 3.149e-06 4.449e-06 0.00% Castro::FluxRegFineAdd() 10 1.59e-06 2.25e-06 3.523e-06 0.00% Amr::init() 1 1.939e-06 2.225e-06 2.83e-06 0.00% Amr::initialInit() 1 1.343e-06 1.558e-06 1.76e-06 0.00% DistributionMapping::Distribute() 1 8.65e-07 1.021e-06 1.12e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.569 3.571 3.571 100.00% Amr::coarseTimeStep() 10 3.381 3.381 3.381 94.67% Amr::timeStep() 10 3.369 3.371 3.372 94.41% Castro::advance() 10 3.354 3.354 3.355 93.94% Castro::subcycle_advance_ctu() 10 3.277 3.282 3.292 92.19% Castro::do_advance_ctu() 10 3.277 3.282 3.292 92.19% Castro::construct_ctu_hydro_source() 10 2.042 2.351 2.462 68.94% Gravity::make_radial_gravity() 21 0.339 0.3526 0.3772 10.56% Castro::construct_old_gravity() 10 0.2047 0.2153 0.2339 6.55% Gravity::get_old_grav_vector() 10 0.2039 0.2145 0.2329 6.52% Gravity::get_new_grav_vector() 11 0.2268 0.228 0.229 6.41% Castro::construct_new_gravity() 10 0.2026 0.2036 0.2048 5.74% FillPatchIterator::Initialize 41 0.1749 0.1851 0.1998 5.59% Amr::init() 1 0.175 0.1751 0.1751 4.90% Castro::initialize_do_advance() 10 0.1565 0.1682 0.1751 4.90% FillPatchSingleLevel 41 0.1227 0.1403 0.175 4.90% Amr::initialInit() 1 0.1611 0.1612 0.1614 4.52% FabArray::ParallelCopy() 41 0.07936 0.09803 0.1384 3.88% Amr::InitializeInit() 1 0.05718 0.09686 0.1338 3.75% Amr::defBaseLevel() 1 0.05718 0.09685 0.1338 3.75% Castro::expand_state() 10 0.1094 0.1211 0.1269 3.55% Castro::clean_state() 62 0.1062 0.116 0.1198 3.35% Castro::initData() 1 0.04268 0.08191 0.118 3.30% Castro::estTimeStep() 21 0.02175 0.06007 0.1093 3.06% FabArray::ParallelCopy_finish() 41 0.03171 0.05449 0.1085 3.04% Amr::FinalizeInit() 1 0.02746 0.06439 0.104 2.91% Castro::computeInitialDt() 2 0.001709 0.03866 0.07836 2.19% Castro::initialize_advance() 10 0.06175 0.07244 0.07719 2.16% FabArray::setVal() 143 0.0618 0.07139 0.07587 2.12% Castro::computeTemp() 63 0.06288 0.06916 0.07195 2.01% Castro::do_new_sources() 10 0.0567 0.06439 0.06718 1.88% Castro::reset_internal_energy(MultiFab) 63 0.04557 0.05012 0.05228 1.46% Castro::reset_internal_energy(Fab) 1008 0.04525 0.04981 0.05195 1.45% Castro::do_old_sources() 10 0.04001 0.0474 0.04982 1.40% FabArray::ParallelCopy_nowait() 41 0.02981 0.04344 0.04838 1.35% StateDataPhysBCFunct::() 41 0.03627 0.04219 0.04663 1.31% StateData::FillBoundary(geom) 41 0.03611 0.04203 0.04649 1.30% Castro::normalize_species() 62 0.03875 0.04151 0.04368 1.22% Castro::construct_new_source() 50 0.02532 0.03027 0.03226 0.90% Gravity::interpolate_monopole_grav() 21 0.0255 0.02727 0.02794 0.78% Castro::construct_new_gravity_source() 10 0.02012 0.02366 0.02521 0.71% Castro::post_init() 1 0.02483 0.02504 0.0252 0.71% Amr::writePlotFile() 2 0.0235 0.02362 0.02381 0.67% Castro::apply_source_to_state() 20 0.0116 0.01519 0.01684 0.47% MultiFab::Saxpy() 20 0.01155 0.01514 0.01677 0.47% Castro::post_timestep() 10 0.01445 0.01603 0.0166 0.46% FabArray::setDomainBndry() 41 0.005012 0.01228 0.01552 0.43% VisMF::Write(FabArray) 2 0.01133 0.01189 0.01422 0.40% Castro::check_for_nan() 20 0.01073 0.01195 0.0136 0.38% MultiFab::contains_nan() 20 0.0107 0.01193 0.01357 0.38% Castro::construct_old_source() 50 0.005716 0.01058 0.01236 0.35% Castro::construct_old_gravity_source() 10 0.005675 0.0105 0.01225 0.34% Castro::Castro() 1 0.009516 0.009946 0.01077 0.30% Castro::computeNewDt() 9 0.007369 0.007379 0.007387 0.21% Castro::initMFs() 1 0.005515 0.005844 0.006924 0.19% Castro::enforce_min_density() 62 0.005358 0.006126 0.00664 0.19% AmrLevel::AmrLevel(dm) 1 0.004663 0.004822 0.005205 0.15% StateData::define() 4 0.004645 0.004804 0.005186 0.15% Castro::swap_state_time_levels() 10 0.00308 0.003977 0.004151 0.12% Castro::post_regrid() 1 0.001547 0.001604 0.001654 0.05% Castro::buildMetrics() 1 0.001437 0.001501 0.001653 0.05% Castro::finalize_do_advance() 10 0.0004712 0.001084 0.001358 0.04% Amr::InitAmr() 1 0.0002632 0.0002958 0.0004209 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.28e-05 0.0001483 0.0001802 0.01% DistributionMapping::LeastUsedCPUs() 1 7.625e-06 0.0001429 0.0001732 0.00% FabArrayBase::getCPC() 41 7.734e-05 8.245e-05 9.655e-05 0.00% Castro::enforce_consistent_e() 1 8.408e-05 8.906e-05 9.624e-05 0.00% Amr::writeSmallPlotFile() 1 2.578e-05 4.921e-05 7.197e-05 0.00% Castro::finalize_advance() 10 5.797e-05 6.256e-05 6.512e-05 0.00% FabArrayBase::CPC::define() 2 2.322e-05 2.856e-05 3.339e-05 0.00% Castro::enforce_speed_limit() 62 2.249e-05 2.581e-05 3.021e-05 0.00% Gravity::set_mass_offset() 10 6.679e-06 1.039e-05 1.714e-05 0.00% Gravity::swapTimeLevels() 10 7.583e-06 1.263e-05 1.634e-05 0.00% Castro::create_source_corrector() 10 7.447e-06 1.19e-05 1.445e-05 0.00% Castro::FluxRegCrseInit 10 6.896e-06 8.806e-06 1.029e-05 0.00% Amr::initSubcycle() 1 8.271e-06 9.043e-06 9.852e-06 0.00% Castro::retry_advance_ctu() 10 3.734e-06 5.511e-06 6.789e-06 0.00% Castro::FluxRegFineAdd() 10 1.59e-06 2.25e-06 3.523e-06 0.00% DistributionMapping::Distribute() 1 8.65e-07 1.021e-06 1.12e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-20-g74183fe377df) finalized