MPI initialized with 4 MPI processes
MPI initialized with thread support level 3
AMReX (22.06-33-g6f72de283c38) initialized
Starting run at 06:51:14 UTC on 2022-06-16.
Successfully read inputs file ...
Castro git describe: 22.06-12-g556652b03
AMReX git describe: 22.06-33-g6f72de283
Microphysics git describe: 22.06-2-g35a553f4
reading extern runtime parameters ...
2 Species:
A B
Successfully read inputs file ...
Initializing the data at level 0
Done initializing the level 0 data
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
TIME= 0 MASS = 1
TIME= 0 XMOM = 1
TIME= 0 YMOM = 1
TIME= 0 ZMOM = 1
TIME= 0 ANG MOM X = 0
TIME= 0 ANG MOM Y = 0
TIME= 0 ANG MOM Z = 0
TIME= 0 RHO*e = 2.5
TIME= 0 RHO*K = 1.5
TIME= 0 RHO*E = 4
TIME= 0 CENTER OF MASS X-LOC = 0.5
TIME= 0 CENTER OF MASS X-VEL = 1
TIME= 0 CENTER OF MASS Y-LOC = 0.5
TIME= 0 CENTER OF MASS Y-VEL = 1
TIME= 0 CENTER OF MASS Z-LOC = 0.5
TIME= 0 CENTER OF MASS Z-VEL = 1
TIME= 0 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0 MAXIMUM DENSITY = 1
INITIAL GRIDS
Level 0 4 grids 262144 cells 100 % of domain
smallest grid: 64 x 32 x 32 biggest grid: 64 x 32 x 32
PLOTFILE: file = species-mhd_plt00000
Write plotfile time = 0.012757992 seconds
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[Level 0 step 1] ADVANCE with dt = 0.0006441185975
[1m[32m Beginning subcycle 1 starting at time 0 with dt = 0.0006441185975[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009635812
... mhd ...!!!
Castro::do_new_sources() time = 0.016903695
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1300030029
[Level 0 step 1] Advanced 262144 cells
TIME= 0.0006441185975 MASS = 1
TIME= 0.0006441185975 XMOM = 1
TIME= 0.0006441185975 YMOM = 1
TIME= 0.0006441185975 ZMOM = 1
TIME= 0.0006441185975 ANG MOM X = 0
TIME= 0.0006441185975 ANG MOM Y = 0
TIME= 0.0006441185975 ANG MOM Z = 0
TIME= 0.0006441185975 RHO*e = 2.5
TIME= 0.0006441185975 RHO*K = 1.5
TIME= 0.0006441185975 RHO*E = 4
TIME= 0.0006441185975 CENTER OF MASS X-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS X-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Y-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Y-VEL = 1
TIME= 0.0006441185975 CENTER OF MASS Z-LOC = 0.5
TIME= 0.0006441185975 CENTER OF MASS Z-VEL = 1
TIME= 0.0006441185975 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.0006441185975 MAXIMUM DENSITY = 1
[STEP 1] Coarse TimeStep time: 2.029753517
[STEP 1] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 1 TIME = 0.0006441185975 DT = 0.0006441185975
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0006763245274 = 1.05 * 0.0006441185975
[Level 0 step 2] ADVANCE with dt = 0.0006763245274
[1m[32m Beginning subcycle 1 starting at time 0.0006441185975 with dt = 0.0006763245274[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009336531
... mhd ...!!!
Castro::do_new_sources() time = 0.0169217
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1314939792
[Level 0 step 2] Advanced 262144 cells
TIME= 0.001320443125 MASS = 1
TIME= 0.001320443125 XMOM = 1
TIME= 0.001320443125 YMOM = 1
TIME= 0.001320443125 ZMOM = 1
TIME= 0.001320443125 ANG MOM X = 0
TIME= 0.001320443125 ANG MOM Y = 0
TIME= 0.001320443125 ANG MOM Z = 0
TIME= 0.001320443125 RHO*e = 2.5
TIME= 0.001320443125 RHO*K = 1.5
TIME= 0.001320443125 RHO*E = 4
TIME= 0.001320443125 CENTER OF MASS X-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS X-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Y-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Y-VEL = 1
TIME= 0.001320443125 CENTER OF MASS Z-LOC = 0.5
TIME= 0.001320443125 CENTER OF MASS Z-VEL = 1
TIME= 0.001320443125 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.001320443125 MAXIMUM DENSITY = 1
[STEP 2] Coarse TimeStep time: 2.006615666
[STEP 2] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 2 TIME = 0.001320443125 DT = 0.0006763245274
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007101407537 = 1.05 * 0.0006763245274
[Level 0 step 3] ADVANCE with dt = 0.0007101407537
[1m[32m Beginning subcycle 1 starting at time 0.001320443125 with dt = 0.0007101407537[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.009445311
... mhd ...!!!
Castro::do_new_sources() time = 0.034567035
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1300600174
[Level 0 step 3] Advanced 262144 cells
TIME= 0.002030583879 MASS = 1
TIME= 0.002030583879 XMOM = 1
TIME= 0.002030583879 YMOM = 1
TIME= 0.002030583879 ZMOM = 1
TIME= 0.002030583879 ANG MOM X = 0
TIME= 0.002030583879 ANG MOM Y = 0
TIME= 0.002030583879 ANG MOM Z = 0
TIME= 0.002030583879 RHO*e = 2.5
TIME= 0.002030583879 RHO*K = 1.5
TIME= 0.002030583879 RHO*E = 4
TIME= 0.002030583879 CENTER OF MASS X-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS X-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Y-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Y-VEL = 1
TIME= 0.002030583879 CENTER OF MASS Z-LOC = 0.5
TIME= 0.002030583879 CENTER OF MASS Z-VEL = 1
TIME= 0.002030583879 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.002030583879 MAXIMUM DENSITY = 1
[STEP 3] Coarse TimeStep time: 2.029869117
[STEP 3] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 3 TIME = 0.002030583879 DT = 0.0007101407537
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0007456477914 = 1.05 * 0.0007101407537
[Level 0 step 4] ADVANCE with dt = 0.0007456477914
[1m[32m Beginning subcycle 1 starting at time 0.002030583879 with dt = 0.0007456477914[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008260529
... mhd ...!!!
Castro::do_new_sources() time = 0.027872134
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.125066722
[Level 0 step 4] Advanced 262144 cells
TIME= 0.00277623167 MASS = 1
TIME= 0.00277623167 XMOM = 1
TIME= 0.00277623167 YMOM = 1
TIME= 0.00277623167 ZMOM = 1
TIME= 0.00277623167 ANG MOM X = 0
TIME= 0.00277623167 ANG MOM Y = 0
TIME= 0.00277623167 ANG MOM Z = 0
TIME= 0.00277623167 RHO*e = 2.5
TIME= 0.00277623167 RHO*K = 1.5
TIME= 0.00277623167 RHO*E = 4
TIME= 0.00277623167 CENTER OF MASS X-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS X-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Y-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Y-VEL = 1
TIME= 0.00277623167 CENTER OF MASS Z-LOC = 0.5
TIME= 0.00277623167 CENTER OF MASS Z-VEL = 1
TIME= 0.00277623167 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.00277623167 MAXIMUM DENSITY = 1
[STEP 4] Coarse TimeStep time: 2.109263242
[STEP 4] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 4 TIME = 0.00277623167 DT = 0.0007456477914
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.000782930181 = 1.05 * 0.0007456477914
[Level 0 step 5] ADVANCE with dt = 0.000782930181
[1m[32m Beginning subcycle 1 starting at time 0.00277623167 with dt = 0.000782930181[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008181739
... mhd ...!!!
Castro::do_new_sources() time = 0.016151781
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.133582065
[Level 0 step 5] Advanced 262144 cells
TIME= 0.003559161851 MASS = 1
TIME= 0.003559161851 XMOM = 1
TIME= 0.003559161851 YMOM = 1
TIME= 0.003559161851 ZMOM = 1
TIME= 0.003559161851 ANG MOM X = 0
TIME= 0.003559161851 ANG MOM Y = 0
TIME= 0.003559161851 ANG MOM Z = 0
TIME= 0.003559161851 RHO*e = 2.5
TIME= 0.003559161851 RHO*K = 1.5
TIME= 0.003559161851 RHO*E = 4
TIME= 0.003559161851 CENTER OF MASS X-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS X-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Y-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Y-VEL = 1
TIME= 0.003559161851 CENTER OF MASS Z-LOC = 0.5
TIME= 0.003559161851 CENTER OF MASS Z-VEL = 1
TIME= 0.003559161851 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.003559161851 MAXIMUM DENSITY = 1
[STEP 5] Coarse TimeStep time: 1.974976228
[STEP 5] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 5 TIME = 0.003559161851 DT = 0.000782930181
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.00082207669 = 1.05 * 0.000782930181
[Level 0 step 6] ADVANCE with dt = 0.00082207669
[1m[32m Beginning subcycle 1 starting at time 0.003559161851 with dt = 0.00082207669[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008137063
... mhd ...!!!
Castro::do_new_sources() time = 0.01463652
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1344002561
[Level 0 step 6] Advanced 262144 cells
TIME= 0.004381238541 MASS = 1
TIME= 0.004381238541 XMOM = 1
TIME= 0.004381238541 YMOM = 1
TIME= 0.004381238541 ZMOM = 1
TIME= 0.004381238541 ANG MOM X = 0
TIME= 0.004381238541 ANG MOM Y = 0
TIME= 0.004381238541 ANG MOM Z = 0
TIME= 0.004381238541 RHO*e = 2.5
TIME= 0.004381238541 RHO*K = 1.5
TIME= 0.004381238541 RHO*E = 4
TIME= 0.004381238541 CENTER OF MASS X-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS X-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Y-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Y-VEL = 1
TIME= 0.004381238541 CENTER OF MASS Z-LOC = 0.5
TIME= 0.004381238541 CENTER OF MASS Z-VEL = 1
TIME= 0.004381238541 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.004381238541 MAXIMUM DENSITY = 1
[STEP 6] Coarse TimeStep time: 1.993119362
[STEP 6] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 6 TIME = 0.004381238541 DT = 0.00082207669
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0008631805245 = 1.05 * 0.00082207669
[Level 0 step 7] ADVANCE with dt = 0.0008631805245
[1m[32m Beginning subcycle 1 starting at time 0.004381238541 with dt = 0.0008631805245[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008232597
... mhd ...!!!
Castro::do_new_sources() time = 0.015945803
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1329837418
[Level 0 step 7] Advanced 262144 cells
TIME= 0.005244419066 MASS = 1
TIME= 0.005244419066 XMOM = 1
TIME= 0.005244419066 YMOM = 1
TIME= 0.005244419066 ZMOM = 1
TIME= 0.005244419066 ANG MOM X = 0
TIME= 0.005244419066 ANG MOM Y = 0
TIME= 0.005244419066 ANG MOM Z = 0
TIME= 0.005244419066 RHO*e = 2.5
TIME= 0.005244419066 RHO*K = 1.5
TIME= 0.005244419066 RHO*E = 4
TIME= 0.005244419066 CENTER OF MASS X-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS X-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Y-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Y-VEL = 1
TIME= 0.005244419066 CENTER OF MASS Z-LOC = 0.5
TIME= 0.005244419066 CENTER OF MASS Z-VEL = 1
TIME= 0.005244419066 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.005244419066 MAXIMUM DENSITY = 1
[STEP 7] Coarse TimeStep time: 1.984283524
[STEP 7] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 7 TIME = 0.005244419066 DT = 0.0008631805245
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009063395508 = 1.05 * 0.0008631805245
[Level 0 step 8] ADVANCE with dt = 0.0009063395508
[1m[32m Beginning subcycle 1 starting at time 0.005244419066 with dt = 0.0009063395508[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.00808017
... mhd ...!!!
Castro::do_new_sources() time = 0.014684451
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1345664817
[Level 0 step 8] Advanced 262144 cells
TIME= 0.006150758616 MASS = 1
TIME= 0.006150758616 XMOM = 1
TIME= 0.006150758616 YMOM = 1
TIME= 0.006150758616 ZMOM = 1
TIME= 0.006150758616 ANG MOM X = 0
TIME= 0.006150758616 ANG MOM Y = 0
TIME= 0.006150758616 ANG MOM Z = 0
TIME= 0.006150758616 RHO*e = 2.5
TIME= 0.006150758616 RHO*K = 1.5
TIME= 0.006150758616 RHO*E = 4
TIME= 0.006150758616 CENTER OF MASS X-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS X-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Y-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Y-VEL = 1
TIME= 0.006150758616 CENTER OF MASS Z-LOC = 0.5
TIME= 0.006150758616 CENTER OF MASS Z-VEL = 1
TIME= 0.006150758616 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.006150758616 MAXIMUM DENSITY = 1
[STEP 8] Coarse TimeStep time: 1.960347634
[STEP 8] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 8 TIME = 0.006150758616 DT = 0.0009063395508
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009516565283 = 1.05 * 0.0009063395508
[Level 0 step 9] ADVANCE with dt = 0.0009516565283
[1m[32m Beginning subcycle 1 starting at time 0.006150758616 with dt = 0.0009516565283[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.008240085
... mhd ...!!!
Castro::do_new_sources() time = 0.014853813
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1343868992
[Level 0 step 9] Advanced 262144 cells
TIME= 0.007102415145 MASS = 1
TIME= 0.007102415145 XMOM = 1
TIME= 0.007102415145 YMOM = 1
TIME= 0.007102415145 ZMOM = 1
TIME= 0.007102415145 ANG MOM X = 0
TIME= 0.007102415145 ANG MOM Y = 0
TIME= 0.007102415145 ANG MOM Z = 0
TIME= 0.007102415145 RHO*e = 2.5
TIME= 0.007102415145 RHO*K = 1.5
TIME= 0.007102415145 RHO*E = 4
TIME= 0.007102415145 CENTER OF MASS X-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS X-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Y-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Y-VEL = 1
TIME= 0.007102415145 CENTER OF MASS Z-LOC = 0.5
TIME= 0.007102415145 CENTER OF MASS Z-VEL = 1
TIME= 0.007102415145 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.007102415145 MAXIMUM DENSITY = 1
[STEP 9] Coarse TimeStep time: 1.962955373
[STEP 9] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 9 TIME = 0.007102415145 DT = 0.0009516565283
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
Castro::compute_new_dt : limiting dt at level 0
... new dt computed: 0.006441185975
... but limiting to: 0.0009992393547 = 1.05 * 0.0009516565283
[Level 0 step 10] ADVANCE with dt = 0.0009992393547
[1m[32m Beginning subcycle 1 starting at time 0.007102415145 with dt = 0.0009992393547[0m
Estimated number of subcycles remaining: 1
Castro::do_old_sources() time = 0.00818202
... mhd ...!!!
Castro::do_new_sources() time = 0.014691661
...estimated hydro-limited timestep at level 0: 0.006441185975
Castro::estTimeStep (hydro-limited) at level 0: estdt = 0.006441185975
[1m[32m Subcycle completed[0m
Subcycling complete
Zones advanced per microsecond at this level: 0.1332792753
[Level 0 step 10] Advanced 262144 cells
TIME= 0.008101654499 MASS = 1
TIME= 0.008101654499 XMOM = 1
TIME= 0.008101654499 YMOM = 1
TIME= 0.008101654499 ZMOM = 1
TIME= 0.008101654499 ANG MOM X = 0
TIME= 0.008101654499 ANG MOM Y = 0
TIME= 0.008101654499 ANG MOM Z = 0
TIME= 0.008101654499 RHO*e = 2.5
TIME= 0.008101654499 RHO*K = 1.5
TIME= 0.008101654499 RHO*E = 4
TIME= 0.008101654499 CENTER OF MASS X-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS X-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Y-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Y-VEL = 1
TIME= 0.008101654499 CENTER OF MASS Z-LOC = 0.5
TIME= 0.008101654499 CENTER OF MASS Z-VEL = 1
TIME= 0.008101654499 MAXIMUM TEMPERATURE = 1.202723619e-08
TIME= 0.008101654499 MAXIMUM DENSITY = 1
[STEP 10] Coarse TimeStep time: 1.979033686
[STEP 10] FAB kilobyte spread across MPI nodes: [114549 ... 114549]
STEP = 10 TIME = 0.008101654499 DT = 0.0009992393547
PLOTFILE: file = species-mhd_plt00010
Write plotfile time = 0.00964568 seconds
Ending run at 06:51:34 UTC on 2022-06-16.
Run time = 20.11370349
Run time without initialization = 20.04830687
Average number of zones advanced per microsecond: 0.131
Average number of zones advanced per microsecond per rank: 0.033
TinyProfiler total time across processes [min...avg...max]: 20.11 ... 20.11 ... 20.11
-------------------------------------------------------------------------------------------
Name NCalls Excl. Min Excl. Avg Excl. Max Max %
-------------------------------------------------------------------------------------------
Castro::do_advance_ctu() 10 18.9048 18.9122 18.9159 94.04%
FabArray::ParallelCopy_finish() 148 0.1794 0.1937 0.205 1.02%
FabArray::ParallelCopy_nowait() 148 0.1004 0.1185 0.1258 0.63%
Castro::reset_internal_energy(Fab) 1008 0.1194 0.1202 0.1212 0.60%
FabArray::setVal() 137 0.08819 0.09564 0.1074 0.53%
FillPatchIterator::Initialize 148 0.1006 0.1017 0.1026 0.51%
Castro::estTimeStep() 21 0.05668 0.05967 0.06432 0.32%
Castro::initialize_do_advance() 10 0.06154 0.06206 0.06257 0.31%
Castro::normalize_species() 62 0.05425 0.05533 0.05665 0.28%
MultiFab::Saxpy() 50 0.0357 0.0454 0.04994 0.25%
Castro::sum_integrated_quantities() 11 0.009374 0.02004 0.04984 0.25%
Castro::construct_new_source() 40 0.03195 0.03381 0.03755 0.19%
Castro::finalize_do_advance() 10 0.0291 0.03279 0.03516 0.17%
Castro::do_old_sources() 10 0.0001566 0.01093 0.0337 0.17%
Amr::coarseTimeStep() 10 0.0007156 0.02354 0.03117 0.15%
Castro::expand_state() 10 0.02221 0.02704 0.02939 0.15%
Castro::derive() 44 0.02612 0.02743 0.02801 0.14%
Castro::computeTemp() 63 0.02649 0.02715 0.02762 0.14%
Castro::construct_old_source() 40 0.01727 0.01888 0.01964 0.10%
Castro::initialize_advance() 10 0.01575 0.01672 0.01829 0.09%
VisMF::Write(FabArray) 2 0.01151 0.01249 0.01536 0.08%
Castro::volWgtSum() 132 0.01424 0.01447 0.01468 0.07%
MultiFab::contains_nan() 20 0.01271 0.01337 0.01391 0.07%
Castro::do_new_sources() 10 0.0001571 0.003222 0.01223 0.06%
Amr::writePlotFile() 2 0.007267 0.01019 0.01119 0.06%
Castro::enforce_min_density() 62 0.009668 0.01023 0.01058 0.05%
Castro::initMFs() 1 0.009649 0.009662 0.009694 0.05%
StateData::define() 5 0.008756 0.008799 0.008879 0.04%
Castro::swap_state_time_levels() 10 0.007045 0.007279 0.0079 0.04%
main() 1 0.007123 0.007473 0.007805 0.04%
Castro::locWgtSum() 33 0.003354 0.003478 0.003634 0.02%
Castro::initData() 1 0.002934 0.002972 0.003011 0.01%
Castro::buildMetrics() 1 0.002912 0.002915 0.002919 0.01%
Castro::finalize_advance() 10 0.001106 0.001139 0.00117 0.01%
Castro::subcycle_advance_ctu() 10 4.016e-05 0.0002097 0.0006928 0.00%
Castro::reset_internal_energy(MultiFab) 63 0.0004449 0.0004722 0.0005065 0.00%
Castro::enforce_consistent_e() 1 0.000425 0.0004435 0.0004548 0.00%
Amr::InitAmr() 1 0.0002719 0.0002995 0.0003691 0.00%
Castro::clean_state() 62 0.0001756 0.0002079 0.0002872 0.00%
StateDataPhysBCFunct::() 148 0.0001746 0.0001961 0.0002441 0.00%
Castro::computeNewDt() 9 1.538e-05 6.862e-05 0.0002246 0.00%
FabArrayBase::getCPC() 148 0.0001155 0.0001489 0.0002009 0.00%
FabArray::ParallelCopy() 148 0.0001581 0.0001739 0.0001859 0.00%
FillPatchSingleLevel 148 0.0001258 0.0001371 0.0001547 0.00%
FabArrayBase::CPC::define() 6 0.0001396 0.0001428 0.0001483 0.00%
FabArray::setDomainBndry() 148 0.0001319 0.0001391 0.0001482 0.00%
DistributionMapping::LeastUsedCPUs() 1 6.381e-06 7.939e-05 0.0001038 0.00%
Amr::timeStep() 10 6.395e-05 7.342e-05 8.825e-05 0.00%
Amr::writeSmallPlotFile() 1 2.554e-05 4.987e-05 6.56e-05 0.00%
Castro::apply_source_to_state() 20 2.452e-05 3.671e-05 4.82e-05 0.00%
Castro::advance() 10 3.12e-05 3.771e-05 4.412e-05 0.00%
Castro::enforce_speed_limit() 62 3.068e-05 3.4e-05 4.146e-05 0.00%
Amr::FinalizeInit() 1 4.803e-06 1.479e-05 4.026e-05 0.00%
Castro::FluxRegCrseInit 10 9.257e-06 1.902e-05 3.642e-05 0.00%
Amr::defBaseLevel() 1 2.167e-05 2.436e-05 2.899e-05 0.00%
Castro::check_for_nan() 20 2.353e-05 2.542e-05 2.744e-05 0.00%
Castro::post_timestep() 10 2.083e-05 2.432e-05 2.587e-05 0.00%
Castro::computeInitialDt() 2 3.951e-06 9.298e-06 2.247e-05 0.00%
Castro::Castro() 1 1.63e-05 1.878e-05 2.093e-05 0.00%
Castro::create_source_corrector() 10 8.157e-06 1.078e-05 1.303e-05 0.00%
AmrLevel::AmrLevel(dm) 1 9.605e-06 1.093e-05 1.299e-05 0.00%
Amr::initSubcycle() 1 8.111e-06 8.875e-06 1.059e-05 0.00%
Castro::retry_advance_ctu() 10 8.135e-06 9.424e-06 1.031e-05 0.00%
Amr::InitializeInit() 1 1.852e-06 5.092e-06 1.025e-05 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 3.417e-06 5.075e-06 6.537e-06 0.00%
Castro::FluxRegFineAdd() 10 3.432e-06 3.642e-06 3.792e-06 0.00%
Castro::post_regrid() 1 2.903e-06 3.217e-06 3.647e-06 0.00%
Amr::init() 1 1.945e-06 2.351e-06 2.712e-06 0.00%
Castro::post_init() 1 1.614e-06 1.969e-06 2.62e-06 0.00%
Amr::initialInit() 1 1.529e-06 1.881e-06 2.081e-06 0.00%
DistributionMapping::Distribute() 1 7.01e-07 8.66e-07 9.52e-07 0.00%
-------------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------------
Name NCalls Incl. Min Incl. Avg Incl. Max Max %
-------------------------------------------------------------------------------------------
main() 1 20.11 20.11 20.11 100.00%
Amr::coarseTimeStep() 10 20.04 20.04 20.04 99.64%
Amr::timeStep() 10 19.97 19.98 20 99.45%
Castro::advance() 10 19.87 19.88 19.88 98.83%
Castro::subcycle_advance_ctu() 10 19.77 19.78 19.78 98.35%
Castro::do_advance_ctu() 10 19.77 19.78 19.78 98.35%
FillPatchIterator::Initialize 148 0.3813 0.4148 0.4343 2.16%
Castro::initialize_do_advance() 10 0.385 0.4012 0.4116 2.05%
FillPatchSingleLevel 148 0.2805 0.313 0.3316 1.65%
FabArray::ParallelCopy() 148 0.2802 0.3126 0.3313 1.65%
Castro::expand_state() 10 0.2238 0.231 0.2365 1.18%
Castro::clean_state() 62 0.2102 0.2116 0.2141 1.06%
FabArray::ParallelCopy_finish() 148 0.1794 0.1937 0.205 1.02%
Castro::do_new_sources() 10 0.1785 0.1837 0.1871 0.93%
Castro::computeTemp() 63 0.147 0.1478 0.1485 0.74%
Castro::construct_new_source() 40 0.1056 0.1226 0.1334 0.66%
Castro::post_timestep() 10 0.09479 0.1048 0.1312 0.65%
FabArray::ParallelCopy_nowait() 148 0.1006 0.1187 0.1261 0.63%
Castro::reset_internal_energy(MultiFab) 63 0.1199 0.1207 0.1216 0.60%
Castro::reset_internal_energy(Fab) 1008 0.1194 0.1202 0.1212 0.60%
Castro::sum_integrated_quantities() 11 0.07574 0.08562 0.1122 0.56%
Castro::do_old_sources() 10 0.08509 0.0931 0.1086 0.54%
FabArray::setVal() 137 0.08819 0.09564 0.1074 0.53%
Castro::initialize_advance() 10 0.09413 0.09793 0.1036 0.52%
Amr::init() 1 0.06492 0.06499 0.06502 0.32%
Castro::estTimeStep() 21 0.05668 0.05967 0.06432 0.32%
Castro::normalize_species() 62 0.05425 0.05533 0.05665 0.28%
Amr::initialInit() 1 0.05202 0.05203 0.05204 0.26%
MultiFab::Saxpy() 50 0.0357 0.0454 0.04994 0.25%
Castro::derive() 44 0.04475 0.04764 0.04887 0.24%
Amr::InitializeInit() 1 0.03653 0.03673 0.03695 0.18%
Amr::defBaseLevel() 1 0.03653 0.03672 0.03695 0.18%
Castro::finalize_do_advance() 10 0.0291 0.03279 0.03516 0.17%
Castro::construct_old_source() 40 0.02828 0.032 0.03348 0.17%
Castro::computeNewDt() 9 0.0243 0.02437 0.02458 0.12%
Amr::writePlotFile() 2 0.02263 0.02268 0.0227 0.11%
Castro::apply_source_to_state() 20 0.01464 0.01802 0.01926 0.10%
Castro::Castro() 1 0.01616 0.01625 0.01636 0.08%
Amr::FinalizeInit() 1 0.01508 0.0153 0.01551 0.08%
VisMF::Write(FabArray) 2 0.01151 0.01249 0.01536 0.08%
Castro::volWgtSum() 132 0.01424 0.01447 0.01468 0.07%
Castro::check_for_nan() 20 0.01273 0.0134 0.01393 0.07%
MultiFab::contains_nan() 20 0.01271 0.01337 0.01391 0.07%
Castro::initData() 1 0.01145 0.01155 0.01165 0.06%
Castro::enforce_min_density() 62 0.009668 0.01023 0.01058 0.05%
Castro::initMFs() 1 0.009649 0.009662 0.009694 0.05%
Castro::post_init() 1 0.009483 0.009506 0.009526 0.05%
AmrLevel::AmrLevel(dm) 1 0.008769 0.00881 0.008889 0.04%
StateData::define() 5 0.008756 0.008799 0.008879 0.04%
Castro::swap_state_time_levels() 10 0.007045 0.007279 0.0079 0.04%
Castro::computeInitialDt() 2 0.005391 0.005599 0.005815 0.03%
Castro::locWgtSum() 33 0.003354 0.003478 0.003634 0.02%
Castro::buildMetrics() 1 0.003249 0.003256 0.003272 0.02%
Castro::post_regrid() 1 0.002878 0.002889 0.002905 0.01%
Castro::finalize_advance() 10 0.001146 0.001162 0.001183 0.01%
Castro::enforce_consistent_e() 1 0.000425 0.0004435 0.0004548 0.00%
Amr::InitAmr() 1 0.0002805 0.0003084 0.0003772 0.00%
FabArrayBase::getCPC() 148 0.0002586 0.0002917 0.0003492 0.00%
StateDataPhysBCFunct::() 148 0.0001746 0.0001961 0.0002441 0.00%
FabArrayBase::CPC::define() 6 0.0001396 0.0001428 0.0001483 0.00%
FabArray::setDomainBndry() 148 0.0001319 0.0001391 0.0001482 0.00%
DistributionMapping::SFCProcessorMapDoIt() 1 1.067e-05 8.533e-05 0.0001113 0.00%
DistributionMapping::LeastUsedCPUs() 1 6.381e-06 7.939e-05 0.0001038 0.00%
Amr::writeSmallPlotFile() 1 2.554e-05 4.987e-05 6.56e-05 0.00%
Castro::enforce_speed_limit() 62 3.068e-05 3.4e-05 4.146e-05 0.00%
Castro::FluxRegCrseInit 10 9.257e-06 1.902e-05 3.642e-05 0.00%
Castro::create_source_corrector() 10 8.157e-06 1.078e-05 1.303e-05 0.00%
Amr::initSubcycle() 1 8.111e-06 8.875e-06 1.059e-05 0.00%
Castro::retry_advance_ctu() 10 8.135e-06 9.424e-06 1.031e-05 0.00%
Castro::FluxRegFineAdd() 10 3.432e-06 3.642e-06 3.792e-06 0.00%
DistributionMapping::Distribute() 1 7.01e-07 8.66e-07 9.52e-07 0.00%
-------------------------------------------------------------------------------------------
Unused ParmParse Variables:
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2]
AMReX (22.06-33-g6f72de283c38) finalized