MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-34-gbf79c456a9a5) initialized Starting run at 05:38:35 UTC on 2022-06-17. Successfully read inputs file ... Castro git describe: 22.06-12-g556652b03 AMReX git describe: 22.06-34-gbf79c456a Microphysics git describe: 22.06-4-gef2eb86c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013312599 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.353206679 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.347171527 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.341667011 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.341340443 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.354611026 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.345048001 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.332781373 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.333686783 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.33313462 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.33497367 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009734736 seconds Ending run at 05:38:39 UTC on 2022-06-17. Run time = 3.618520312 Run time without initialization = 3.434291168 Average number of zones advanced per microsecond: 0.763 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.616 ... 3.618 ... 3.619 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0454 2.3750 2.4782 68.49% Castro::do_advance_ctu() 10 0.0324 0.1371 0.4709 13.01% Gravity::make_radial_gravity() 21 0.343 0.3527 0.3739 10.33% Castro::initData() 1 0.03838 0.07948 0.1203 3.32% FabArray::ParallelCopy_finish() 41 0.0451 0.06079 0.1144 3.16% Castro::estTimeStep() 21 0.03026 0.07122 0.1123 3.10% FabArray::setVal() 143 0.06723 0.07117 0.07319 2.02% Castro::reset_internal_energy(Fab) 1008 0.04712 0.05014 0.05258 1.45% FabArray::ParallelCopy_nowait() 41 0.02911 0.0446 0.0496 1.37% StateData::FillBoundary(geom) 41 0.03706 0.04308 0.04694 1.30% Castro::normalize_species() 62 0.03932 0.04145 0.04238 1.17% FillPatchIterator::Initialize 41 0.01966 0.03353 0.03735 1.03% Gravity::interpolate_monopole_grav() 21 0.02573 0.02729 0.02794 0.77% Castro::construct_new_gravity_source() 10 0.02369 0.02406 0.02477 0.68% Castro::expand_state() 10 0.01239 0.02017 0.02316 0.64% Castro::initialize_do_advance() 10 0.01103 0.01831 0.02054 0.57% Castro::computeTemp() 63 0.01753 0.01908 0.02007 0.55% MultiFab::Saxpy() 20 0.01104 0.01501 0.01666 0.46% FabArray::setDomainBndry() 41 0.005802 0.01295 0.01552 0.43% MultiFab::contains_nan() 20 0.01025 0.01192 0.0146 0.40% VisMF::Write(FabArray) 2 0.01076 0.01147 0.01379 0.38% Gravity::get_new_grav_vector() 11 0.01007 0.01222 0.01305 0.36% Amr::writePlotFile() 2 0.009492 0.01185 0.01258 0.35% Castro::construct_old_gravity_source() 10 0.006615 0.01072 0.01226 0.34% Gravity::get_old_grav_vector() 10 0.006186 0.01006 0.01146 0.32% Castro::initialize_advance() 10 0.01051 0.01066 0.01093 0.30% Castro::initMFs() 1 0.00543 0.006372 0.00845 0.23% Castro::construct_new_source() 50 0.005024 0.006582 0.007212 0.20% Castro::enforce_min_density() 62 0.005648 0.006172 0.006691 0.18% StateData::define() 4 0.004483 0.005232 0.006529 0.18% main() 1 0.003546 0.005753 0.006229 0.17% Castro::swap_state_time_levels() 10 0.003007 0.00391 0.004059 0.11% Amr::coarseTimeStep() 10 0.0009799 0.001889 0.003738 0.10% Castro::finalize_do_advance() 10 0.00135 0.001691 0.00193 0.05% Castro::buildMetrics() 1 0.00127 0.001453 0.001875 0.05% Amr::InitAmr() 1 0.0002645 0.0003827 0.0006504 0.02% DistributionMapping::LeastUsedCPUs() 1 3.55e-05 0.000471 0.0006134 0.02% Amr::timeStep() 10 0.0001733 0.0002407 0.0005227 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002917 0.000313 0.0003508 0.01% Castro::clean_state() 62 0.0001373 0.0001767 0.0002359 0.01% StateDataPhysBCFunct::() 41 0.0001162 0.000136 0.0001435 0.00% Castro::enforce_consistent_e() 1 7.585e-05 8.741e-05 0.0001069 0.00% Castro::construct_old_source() 50 4.518e-05 8.193e-05 0.0001066 0.00% Amr::FinalizeInit() 1 4.375e-06 1.649e-05 9.742e-05 0.00% FabArray::ParallelCopy() 41 6.127e-05 8.561e-05 9.736e-05 0.00% Castro::subcycle_advance_ctu() 10 3.614e-05 5.631e-05 8.837e-05 0.00% Castro::do_old_sources() 10 4.145e-05 7.079e-05 8.735e-05 0.00% Castro::do_new_sources() 10 4.474e-05 6.858e-05 8.545e-05 0.00% FillPatchSingleLevel 41 5.955e-05 7.346e-05 8.175e-05 0.00% Amr::writeSmallPlotFile() 1 3.191e-05 5.175e-05 6.932e-05 0.00% Castro::construct_new_gravity() 10 4.245e-05 4.962e-05 6.568e-05 0.00% Castro::construct_old_gravity() 10 4.099e-05 5.513e-05 6.436e-05 0.00% Castro::Castro() 1 4.583e-05 5.683e-05 6.299e-05 0.00% Castro::finalize_advance() 10 4.938e-05 5.203e-05 5.687e-05 0.00% FabArrayBase::getCPC() 41 4.747e-05 4.979e-05 5.524e-05 0.00% Castro::apply_source_to_state() 20 3.834e-05 4.678e-05 5.451e-05 0.00% Castro::advance() 10 2.936e-05 4.277e-05 4.851e-05 0.00% Amr::defBaseLevel() 1 2.654e-05 3.6e-05 4.791e-05 0.00% Castro::enforce_speed_limit() 62 1.944e-05 2.626e-05 3.216e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.752e-05 3.203e-05 0.00% Castro::check_for_nan() 20 2.188e-05 2.575e-05 3.011e-05 0.00% Castro::post_timestep() 10 1.234e-05 2.038e-05 2.919e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.126e-05 1.474e-05 2.276e-05 0.00% Amr::initSubcycle() 1 7.811e-06 1.139e-05 2.199e-05 0.00% Castro::post_init() 1 8.732e-06 1.128e-05 2.101e-05 0.00% Gravity::swapTimeLevels() 10 7.635e-06 1.266e-05 1.48e-05 0.00% Castro::create_source_corrector() 10 7.197e-06 1.118e-05 1.309e-05 0.00% Castro::FluxRegCrseInit 10 5.918e-06 9.507e-06 1.269e-05 0.00% Castro::computeNewDt() 9 7.912e-06 1.013e-05 1.261e-05 0.00% Gravity::set_mass_offset() 10 6.817e-06 9.832e-06 1.239e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.771e-06 6.763e-06 1.239e-05 0.00% Castro::retry_advance_ctu() 10 4.194e-06 6.209e-06 7.56e-06 0.00% Amr::InitializeInit() 1 2.059e-06 3.264e-06 6.541e-06 0.00% Castro::computeInitialDt() 2 3.27e-06 4.004e-06 5.119e-06 0.00% Castro::post_regrid() 1 1.789e-06 3.241e-06 4.587e-06 0.00% Amr::init() 1 1.918e-06 2.484e-06 3.3e-06 0.00% Castro::FluxRegFineAdd() 10 1.891e-06 2.346e-06 2.682e-06 0.00% DistributionMapping::Distribute() 1 8.77e-07 1.302e-06 2.385e-06 0.00% Amr::initialInit() 1 1.03e-06 1.519e-06 2.33e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.616 3.618 3.619 100.00% Amr::coarseTimeStep() 10 3.418 3.418 3.418 94.47% Amr::timeStep() 10 3.406 3.408 3.409 94.21% Castro::advance() 10 3.391 3.392 3.392 93.74% Castro::subcycle_advance_ctu() 10 3.317 3.32 3.323 91.83% Castro::do_advance_ctu() 10 3.317 3.319 3.323 91.83% Castro::construct_ctu_hydro_source() 10 2.045 2.375 2.478 68.49% Gravity::make_radial_gravity() 21 0.343 0.3527 0.3739 10.33% Gravity::get_new_grav_vector() 11 0.2291 0.2341 0.2368 6.54% Castro::construct_old_gravity() 10 0.2021 0.2109 0.2277 6.29% Gravity::get_old_grav_vector() 10 0.2012 0.21 0.2269 6.27% Castro::construct_new_gravity() 10 0.2061 0.2103 0.2127 5.88% FillPatchIterator::Initialize 41 0.1894 0.1953 0.2068 5.72% Castro::initialize_do_advance() 10 0.1651 0.1793 0.1854 5.12% Amr::init() 1 0.1833 0.1837 0.1838 5.08% FillPatchSingleLevel 41 0.1374 0.1488 0.1813 5.01% Amr::initialInit() 1 0.1697 0.1702 0.1705 4.71% FabArray::ParallelCopy() 41 0.09329 0.1055 0.1437 3.97% Amr::InitializeInit() 1 0.05634 0.09892 0.1431 3.95% Amr::defBaseLevel() 1 0.05634 0.09891 0.1431 3.95% Castro::expand_state() 10 0.1255 0.1304 0.1341 3.71% Castro::initData() 1 0.04219 0.08328 0.1239 3.43% Castro::clean_state() 62 0.1091 0.1164 0.1208 3.34% FabArray::ParallelCopy_finish() 41 0.0451 0.06079 0.1144 3.16% Amr::FinalizeInit() 1 0.02703 0.07127 0.114 3.15% Castro::estTimeStep() 21 0.03026 0.07122 0.1123 3.10% Castro::computeInitialDt() 2 0.001723 0.04594 0.08867 2.45% Castro::initialize_advance() 10 0.06842 0.0722 0.07431 2.05% FabArray::setVal() 143 0.06723 0.07117 0.07319 2.02% Castro::computeTemp() 63 0.06494 0.06953 0.073 2.02% Castro::do_new_sources() 10 0.06235 0.06498 0.06646 1.84% Castro::reset_internal_energy(MultiFab) 63 0.04741 0.05046 0.05293 1.46% Castro::reset_internal_energy(Fab) 1008 0.04712 0.05014 0.05258 1.45% Castro::do_old_sources() 10 0.0371 0.04684 0.05045 1.39% FabArray::ParallelCopy_nowait() 41 0.02919 0.04468 0.04968 1.37% StateDataPhysBCFunct::() 41 0.03717 0.04322 0.04708 1.30% StateData::FillBoundary(geom) 41 0.03706 0.04308 0.04694 1.30% Castro::normalize_species() 62 0.03932 0.04145 0.04238 1.17% Castro::construct_new_source() 50 0.02871 0.03064 0.03198 0.88% Gravity::interpolate_monopole_grav() 21 0.02573 0.02729 0.02794 0.77% Castro::post_init() 1 0.0245 0.02465 0.0248 0.69% Castro::construct_new_gravity_source() 10 0.02369 0.02406 0.02477 0.68% Amr::writePlotFile() 2 0.02317 0.02332 0.02346 0.65% Castro::post_timestep() 10 0.01457 0.01606 0.01703 0.47% Castro::apply_source_to_state() 20 0.01108 0.01506 0.01672 0.46% MultiFab::Saxpy() 20 0.01104 0.01501 0.01666 0.46% FabArray::setDomainBndry() 41 0.005802 0.01295 0.01552 0.43% Castro::check_for_nan() 20 0.01027 0.01194 0.01462 0.40% MultiFab::contains_nan() 20 0.01025 0.01192 0.0146 0.40% VisMF::Write(FabArray) 2 0.01076 0.01147 0.01379 0.38% Castro::construct_old_source() 50 0.00666 0.01081 0.01235 0.34% Castro::construct_old_gravity_source() 10 0.006615 0.01072 0.01226 0.34% Castro::Castro() 1 0.008982 0.009869 0.01213 0.34% Castro::initMFs() 1 0.00543 0.006372 0.00845 0.23% Castro::computeNewDt() 9 0.007388 0.007397 0.007406 0.20% Castro::enforce_min_density() 62 0.005648 0.006172 0.006691 0.18% AmrLevel::AmrLevel(dm) 1 0.004496 0.005246 0.006546 0.18% StateData::define() 4 0.004483 0.005232 0.006529 0.18% Castro::swap_state_time_levels() 10 0.003007 0.00391 0.004059 0.11% Castro::buildMetrics() 1 0.001385 0.001598 0.002097 0.06% Castro::finalize_do_advance() 10 0.00135 0.001691 0.00193 0.05% Castro::post_regrid() 1 0.001556 0.001597 0.001649 0.05% Amr::InitAmr() 1 0.0002723 0.0003941 0.0006724 0.02% DistributionMapping::SFCProcessorMapDoIt() 1 4.744e-05 0.000479 0.0006187 0.02% DistributionMapping::LeastUsedCPUs() 1 3.55e-05 0.000471 0.0006134 0.02% Castro::enforce_consistent_e() 1 7.585e-05 8.741e-05 0.0001069 0.00% FabArrayBase::getCPC() 41 7.121e-05 7.731e-05 8.097e-05 0.00% Castro::finalize_advance() 10 5.903e-05 6.388e-05 6.992e-05 0.00% Amr::writeSmallPlotFile() 1 3.191e-05 5.175e-05 6.932e-05 0.00% Castro::enforce_speed_limit() 62 1.944e-05 2.626e-05 3.216e-05 0.00% FabArrayBase::CPC::define() 2 2.374e-05 2.752e-05 3.203e-05 0.00% Amr::initSubcycle() 1 7.811e-06 1.139e-05 2.199e-05 0.00% Gravity::swapTimeLevels() 10 7.635e-06 1.266e-05 1.48e-05 0.00% Castro::create_source_corrector() 10 7.197e-06 1.118e-05 1.309e-05 0.00% Castro::FluxRegCrseInit 10 5.918e-06 9.507e-06 1.269e-05 0.00% Gravity::set_mass_offset() 10 6.817e-06 9.832e-06 1.239e-05 0.00% Castro::retry_advance_ctu() 10 4.194e-06 6.209e-06 7.56e-06 0.00% Castro::FluxRegFineAdd() 10 1.891e-06 2.346e-06 2.682e-06 0.00% DistributionMapping::Distribute() 1 8.77e-07 1.302e-06 2.385e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-34-gbf79c456a9a5) finalized