MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-44-g027f2ff77fed) initialized Starting run at 05:38:19 UTC on 2022-06-24. Successfully read inputs file ... Castro git describe: 22.06-12-g556652b03 AMReX git describe: 22.06-44-g027f2ff77 Microphysics git describe: 22.06-6-g5146750a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013349683 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.348398266 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.33872821 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.33865136 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.33717288 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.338640167 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.355328803 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.334781987 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.334100438 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.335474606 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.335162813 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009549944 seconds Ending run at 05:38:22 UTC on 2022-06-24. Run time = 3.606689044 Run time without initialization = 3.412241175 Average number of zones advanced per microsecond: 0.768 Average number of zones advanced per microsecond per rank: 0.096 TinyProfiler total time across processes [min...avg...max]: 3.606 ... 3.606 ... 3.607 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0440 2.3556 2.4667 68.39% Castro::do_advance_ctu() 10 0.03695 0.1489 0.4646 12.88% Gravity::make_radial_gravity() 21 0.3378 0.3515 0.378 10.48% Castro::initData() 1 0.03822 0.07929 0.1315 3.64% Castro::estTimeStep() 21 0.02011 0.07663 0.1261 3.50% FabArray::ParallelCopy_finish() 41 0.04431 0.06091 0.1048 2.91% FabArray::setVal() 143 0.06975 0.07288 0.07442 2.06% Castro::reset_internal_energy(Fab) 1008 0.04777 0.0501 0.05183 1.44% FabArray::ParallelCopy_nowait() 41 0.02892 0.0445 0.05049 1.40% StateData::FillBoundary(geom) 41 0.03495 0.0427 0.04671 1.30% Castro::normalize_species() 62 0.03992 0.04122 0.0421 1.17% FillPatchIterator::Initialize 41 0.02005 0.03242 0.03793 1.05% Gravity::interpolate_monopole_grav() 21 0.02566 0.0273 0.02811 0.78% Castro::construct_new_gravity_source() 10 0.01982 0.02337 0.02458 0.68% Castro::expand_state() 10 0.009576 0.01994 0.0238 0.66% Castro::computeTemp() 63 0.01781 0.01887 0.01963 0.54% Castro::initialize_do_advance() 10 0.008886 0.01685 0.01957 0.54% MultiFab::Saxpy() 20 0.01151 0.01531 0.01683 0.47% VisMF::Write(FabArray) 2 0.01094 0.01184 0.0154 0.43% Gravity::get_new_grav_vector() 11 0.009086 0.01181 0.01304 0.36% FabArray::setDomainBndry() 41 0.00496 0.01061 0.01273 0.35% Amr::writePlotFile() 2 0.007711 0.01139 0.0124 0.34% Castro::construct_old_gravity_source() 10 0.005635 0.0106 0.01234 0.34% MultiFab::contains_nan() 20 0.01046 0.01144 0.01222 0.34% Castro::initialize_advance() 10 0.0104 0.01114 0.01143 0.32% Gravity::get_old_grav_vector() 10 0.007545 0.01007 0.01129 0.31% Castro::construct_new_source() 50 0.005274 0.006773 0.007371 0.20% Castro::initMFs() 1 0.005389 0.005826 0.006703 0.19% Castro::enforce_min_density() 62 0.005435 0.006081 0.006619 0.18% StateData::define() 4 0.004509 0.005068 0.006458 0.18% main() 1 0.004756 0.005191 0.005382 0.15% Castro::swap_state_time_levels() 10 0.003017 0.003883 0.004042 0.11% Castro::buildMetrics() 1 0.001258 0.001393 0.001723 0.05% Amr::coarseTimeStep() 10 0.001056 0.001406 0.001692 0.05% Castro::finalize_do_advance() 10 0.0005638 0.001094 0.001255 0.03% Amr::timeStep() 10 0.0001783 0.0002457 0.0005124 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002991 0.000325 0.000428 0.01% Amr::InitAmr() 1 0.000242 0.0003066 0.0004066 0.01% DistributionMapping::LeastUsedCPUs() 1 5.966e-06 0.0001773 0.0002963 0.01% Castro::clean_state() 62 0.0001447 0.0001627 0.0001803 0.00% StateDataPhysBCFunct::() 41 0.000105 0.0001306 0.0001521 0.00% Castro::enforce_consistent_e() 1 7.351e-05 8.894e-05 0.0001113 0.00% FabArray::ParallelCopy() 41 8.32e-05 9.214e-05 0.0001009 0.00% Amr::FinalizeInit() 1 3.914e-06 1.619e-05 9.188e-05 0.00% Castro::do_new_sources() 10 5.064e-05 7.486e-05 9.178e-05 0.00% Castro::construct_old_source() 50 4.482e-05 7.428e-05 8.928e-05 0.00% FillPatchSingleLevel 41 7.095e-05 7.721e-05 8.87e-05 0.00% Castro::do_old_sources() 10 4.701e-05 7.138e-05 8.59e-05 0.00% Castro::subcycle_advance_ctu() 10 4.592e-05 6.054e-05 7.996e-05 0.00% Castro::Castro() 1 4.683e-05 5.791e-05 7.295e-05 0.00% Castro::advance() 10 3.504e-05 5.499e-05 7.23e-05 0.00% Amr::writeSmallPlotFile() 1 5.941e-05 6.319e-05 7.087e-05 0.00% Castro::construct_old_gravity() 10 3.959e-05 5.485e-05 6.591e-05 0.00% FabArrayBase::getCPC() 41 4.861e-05 5.565e-05 6.537e-05 0.00% Castro::finalize_advance() 10 5.034e-05 5.385e-05 6.009e-05 0.00% Castro::apply_source_to_state() 20 4.049e-05 5.108e-05 5.754e-05 0.00% Castro::construct_new_gravity() 10 3.909e-05 4.543e-05 5.283e-05 0.00% Castro::enforce_speed_limit() 62 2.444e-05 3.102e-05 3.436e-05 0.00% Amr::defBaseLevel() 1 2.703e-05 2.879e-05 3.277e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.718e-05 3.17e-05 0.00% Castro::check_for_nan() 20 1.964e-05 2.27e-05 2.496e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.219e-05 1.559e-05 2.038e-05 0.00% Castro::post_init() 1 8.251e-06 1.088e-05 1.874e-05 0.00% Castro::post_timestep() 10 1.317e-05 1.416e-05 1.549e-05 0.00% Gravity::swapTimeLevels() 10 7.438e-06 1.277e-05 1.546e-05 0.00% Amr::initSubcycle() 1 8.505e-06 1.038e-05 1.466e-05 0.00% Castro::FluxRegCrseInit 10 7.667e-06 1.076e-05 1.28e-05 0.00% Castro::create_source_corrector() 10 7.588e-06 1.06e-05 1.261e-05 0.00% Gravity::set_mass_offset() 10 7.167e-06 9.322e-06 1.155e-05 0.00% Castro::computeNewDt() 9 7.741e-06 9.253e-06 1.07e-05 0.00% Amr::InitializeInit() 1 2.126e-06 3.874e-06 7.313e-06 0.00% Castro::retry_advance_ctu() 10 4.074e-06 5.976e-06 7.129e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.361e-06 4.12e-06 5.263e-06 0.00% Castro::computeInitialDt() 2 3.463e-06 4.137e-06 4.811e-06 0.00% Castro::post_regrid() 1 1.913e-06 2.829e-06 4.312e-06 0.00% Castro::FluxRegFineAdd() 10 2.038e-06 2.375e-06 3.073e-06 0.00% Amr::init() 1 1.86e-06 2.177e-06 2.561e-06 0.00% Amr::initialInit() 1 1.213e-06 1.595e-06 2.078e-06 0.00% DistributionMapping::Distribute() 1 8.73e-07 1.069e-06 1.392e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.606 3.606 3.607 100.00% Amr::coarseTimeStep() 10 3.397 3.397 3.397 94.19% Amr::timeStep() 10 3.388 3.388 3.388 93.94% Castro::advance() 10 3.371 3.372 3.372 93.49% Castro::subcycle_advance_ctu() 10 3.296 3.297 3.3 91.49% Castro::do_advance_ctu() 10 3.296 3.297 3.3 91.49% Castro::construct_ctu_hydro_source() 10 2.044 2.356 2.467 68.39% Gravity::make_radial_gravity() 21 0.3378 0.3515 0.378 10.48% Castro::construct_old_gravity() 10 0.2011 0.2123 0.2329 6.46% Gravity::get_old_grav_vector() 10 0.2001 0.2113 0.2318 6.43% Gravity::get_new_grav_vector() 11 0.2288 0.2302 0.2311 6.41% Castro::construct_new_gravity() 10 0.2029 0.204 0.205 5.68% FillPatchIterator::Initialize 41 0.1851 0.1915 0.1949 5.40% Amr::init() 1 0.1938 0.1939 0.1941 5.38% Castro::initialize_do_advance() 10 0.1532 0.1754 0.1841 5.11% Amr::initialInit() 1 0.1801 0.1803 0.1806 5.01% FillPatchSingleLevel 41 0.1366 0.1485 0.1698 4.71% Amr::InitializeInit() 1 0.05594 0.09783 0.1511 4.19% Amr::defBaseLevel() 1 0.05594 0.09782 0.1511 4.19% Castro::initData() 1 0.04206 0.08317 0.1355 3.76% Castro::expand_state() 10 0.1166 0.1286 0.1347 3.73% FabArray::ParallelCopy() 41 0.09247 0.1056 0.1339 3.71% Castro::estTimeStep() 21 0.02011 0.07663 0.1261 3.50% Amr::FinalizeInit() 1 0.02949 0.08252 0.1246 3.45% Castro::clean_state() 62 0.111 0.1159 0.1185 3.29% FabArray::ParallelCopy_finish() 41 0.04431 0.06091 0.1048 2.91% Castro::computeInitialDt() 2 0.001749 0.05493 0.09682 2.68% Castro::initialize_advance() 10 0.07185 0.07477 0.07621 2.11% FabArray::setVal() 143 0.06975 0.07288 0.07442 2.06% Castro::computeTemp() 63 0.06589 0.06929 0.07178 1.99% Castro::do_new_sources() 10 0.05685 0.06429 0.06721 1.86% Castro::reset_internal_energy(MultiFab) 63 0.04807 0.05043 0.05215 1.45% Castro::reset_internal_energy(Fab) 1008 0.04777 0.0501 0.05183 1.44% FabArray::ParallelCopy_nowait() 41 0.02902 0.04458 0.05057 1.40% Castro::do_old_sources() 10 0.04043 0.04768 0.05047 1.40% StateDataPhysBCFunct::() 41 0.03506 0.04283 0.04686 1.30% StateData::FillBoundary(geom) 41 0.03495 0.0427 0.04671 1.30% Castro::normalize_species() 62 0.03992 0.04122 0.0421 1.17% Castro::construct_new_source() 50 0.02513 0.03015 0.03181 0.88% Gravity::interpolate_monopole_grav() 21 0.02566 0.0273 0.02811 0.78% Castro::post_init() 1 0.02665 0.02692 0.02714 0.75% Castro::construct_new_gravity_source() 10 0.01982 0.02337 0.02458 0.68% Amr::writePlotFile() 2 0.02306 0.02323 0.02351 0.65% Castro::apply_source_to_state() 20 0.01156 0.01536 0.01688 0.47% MultiFab::Saxpy() 20 0.01151 0.01531 0.01683 0.47% Castro::post_timestep() 10 0.01548 0.01576 0.01604 0.44% VisMF::Write(FabArray) 2 0.01094 0.01184 0.0154 0.43% FabArray::setDomainBndry() 41 0.00496 0.01061 0.01273 0.35% Castro::construct_old_source() 50 0.00568 0.01067 0.01243 0.34% Castro::construct_old_gravity_source() 10 0.005635 0.0106 0.01234 0.34% Castro::check_for_nan() 20 0.01048 0.01146 0.01224 0.34% MultiFab::contains_nan() 20 0.01046 0.01144 0.01222 0.34% Castro::Castro() 1 0.008973 0.009354 0.01021 0.28% Castro::computeNewDt() 9 0.007092 0.007098 0.007108 0.20% Castro::initMFs() 1 0.005389 0.005826 0.006703 0.19% Castro::enforce_min_density() 62 0.005435 0.006081 0.006619 0.18% AmrLevel::AmrLevel(dm) 1 0.004522 0.005083 0.006478 0.18% StateData::define() 4 0.004509 0.005068 0.006458 0.18% Castro::swap_state_time_levels() 10 0.003017 0.003883 0.004042 0.11% Castro::buildMetrics() 1 0.001378 0.001527 0.001886 0.05% Castro::post_regrid() 1 0.001527 0.001598 0.001815 0.05% Castro::finalize_do_advance() 10 0.0005638 0.001094 0.001255 0.03% Amr::InitAmr() 1 0.0002505 0.000317 0.0004213 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.135e-05 0.0001825 0.0003027 0.01% DistributionMapping::LeastUsedCPUs() 1 5.966e-06 0.0001773 0.0002963 0.01% Castro::enforce_consistent_e() 1 7.351e-05 8.894e-05 0.0001113 0.00% FabArrayBase::getCPC() 41 7.442e-05 8.282e-05 9.452e-05 0.00% Castro::finalize_advance() 10 6.041e-05 6.699e-05 7.405e-05 0.00% Amr::writeSmallPlotFile() 1 5.941e-05 6.319e-05 7.087e-05 0.00% Castro::enforce_speed_limit() 62 2.444e-05 3.102e-05 3.436e-05 0.00% FabArrayBase::CPC::define() 2 2.278e-05 2.718e-05 3.17e-05 0.00% Gravity::swapTimeLevels() 10 7.438e-06 1.277e-05 1.546e-05 0.00% Amr::initSubcycle() 1 8.505e-06 1.038e-05 1.466e-05 0.00% Castro::FluxRegCrseInit 10 7.667e-06 1.076e-05 1.28e-05 0.00% Castro::create_source_corrector() 10 7.588e-06 1.06e-05 1.261e-05 0.00% Gravity::set_mass_offset() 10 7.167e-06 9.322e-06 1.155e-05 0.00% Castro::retry_advance_ctu() 10 4.074e-06 5.976e-06 7.129e-06 0.00% Castro::FluxRegFineAdd() 10 2.038e-06 2.375e-06 3.073e-06 0.00% DistributionMapping::Distribute() 1 8.73e-07 1.069e-06 1.392e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-44-g027f2ff77fed) finalized