MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-44-g027f2ff77fed) initialized Starting run at 05:38:22 UTC on 2022-06-27. Successfully read inputs file ... Castro git describe: 22.06-12-g556652b03 AMReX git describe: 22.06-44-g027f2ff77 Microphysics git describe: 22.06-6-g5146750a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014331429 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.351850648 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.347282109 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.347782378 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.348810297 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.348495966 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.349348481 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.346597607 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.348774004 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.347986212 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.348284853 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.009998472 seconds Ending run at 05:38:26 UTC on 2022-06-27. Run time = 3.732704721 Run time without initialization = 3.501945325 Average number of zones advanced per microsecond: 0.749 Average number of zones advanced per microsecond per rank: 0.094 TinyProfiler total time across processes [min...avg...max]: 3.73 ... 3.732 ... 3.733 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9181 2.4548 2.5470 68.23% Castro::do_advance_ctu() 10 0.0311 0.1242 0.6644 17.80% Gravity::make_radial_gravity() 21 0.3452 0.3601 0.3975 10.65% Castro::initData() 1 0.03974 0.08962 0.1627 4.36% FabArray::ParallelCopy_finish() 41 0.03285 0.05059 0.152 4.07% Castro::estTimeStep() 21 0.02277 0.09918 0.1486 3.98% FabArray::setVal() 143 0.0517 0.0689 0.07229 1.94% FabArray::ParallelCopy_nowait() 41 0.02323 0.05046 0.0555 1.49% Castro::reset_internal_energy(Fab) 1008 0.0462 0.05079 0.05289 1.42% StateData::FillBoundary(geom) 41 0.03503 0.04449 0.04831 1.29% Castro::normalize_species() 62 0.03891 0.04199 0.04398 1.18% FillPatchIterator::Initialize 41 0.01764 0.03687 0.04004 1.07% Gravity::interpolate_monopole_grav() 21 0.02594 0.02772 0.02853 0.76% Castro::expand_state() 10 0.008413 0.02117 0.02485 0.67% Castro::construct_new_gravity_source() 10 0.01788 0.02351 0.02484 0.67% Castro::computeTemp() 63 0.01723 0.01934 0.02035 0.55% Castro::initialize_do_advance() 10 0.008165 0.01838 0.02021 0.54% MultiFab::Saxpy() 20 0.006766 0.01629 0.01811 0.49% VisMF::Write(FabArray) 2 0.01153 0.0122 0.01496 0.40% FabArray::setDomainBndry() 41 0.003895 0.0124 0.01394 0.37% MultiFab::contains_nan() 20 0.009196 0.01214 0.01389 0.37% Gravity::get_new_grav_vector() 11 0.006873 0.01251 0.01388 0.37% Amr::writePlotFile() 2 0.009596 0.01232 0.01297 0.35% Gravity::get_old_grav_vector() 10 0.00492 0.01087 0.01248 0.33% Castro::construct_old_gravity_source() 10 0.003995 0.01109 0.0124 0.33% Castro::initialize_advance() 10 0.002987 0.008837 0.009807 0.26% Castro::initMFs() 1 0.005389 0.006375 0.008459 0.23% Castro::construct_new_source() 50 0.00427 0.007304 0.007987 0.21% Castro::enforce_min_density() 62 0.00491 0.006344 0.007209 0.19% StateData::define() 4 0.004481 0.005146 0.006547 0.18% main() 1 0.003005 0.005508 0.006051 0.16% Castro::swap_state_time_levels() 10 0.002887 0.003714 0.004259 0.11% Amr::coarseTimeStep() 10 0.0007522 0.001841 0.004129 0.11% Castro::buildMetrics() 1 0.001264 0.001473 0.001875 0.05% Castro::finalize_do_advance() 10 0.0005192 0.0009793 0.001117 0.03% Amr::timeStep() 10 0.000181 0.0002552 0.0004972 0.01% Amr::InitAmr() 1 0.0002641 0.0003353 0.0004659 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003113 0.0003267 0.0003393 0.01% DistributionMapping::LeastUsedCPUs() 1 7.689e-06 0.0001631 0.0002451 0.01% Castro::clean_state() 62 0.000149 0.0001786 0.0002104 0.01% StateDataPhysBCFunct::() 41 0.0001003 0.0001446 0.0001618 0.00% Castro::enforce_consistent_e() 1 8.414e-05 9.638e-05 0.000132 0.00% Castro::do_new_sources() 10 4.287e-05 8.632e-05 0.0001114 0.00% FabArray::ParallelCopy() 41 8.682e-05 9.869e-05 0.0001109 0.00% Castro::construct_old_source() 50 4.466e-05 8.458e-05 0.0001026 0.00% Castro::do_old_sources() 10 4.348e-05 7.874e-05 9.487e-05 0.00% FillPatchSingleLevel 41 8.075e-05 8.34e-05 8.741e-05 0.00% Amr::FinalizeInit() 1 4.385e-06 1.565e-05 8.614e-05 0.00% Amr::writeSmallPlotFile() 1 2.514e-05 5.574e-05 8.004e-05 0.00% Castro::advance() 10 3.398e-05 5.254e-05 7.711e-05 0.00% Castro::apply_source_to_state() 20 3.78e-05 5.767e-05 7.644e-05 0.00% Castro::Castro() 1 4.857e-05 6.295e-05 7.584e-05 0.00% Castro::construct_old_gravity() 10 3.127e-05 6.157e-05 7.446e-05 0.00% Castro::subcycle_advance_ctu() 10 3.798e-05 5.289e-05 6.658e-05 0.00% FabArrayBase::getCPC() 41 5.212e-05 5.734e-05 6.382e-05 0.00% Castro::construct_new_gravity() 10 4.15e-05 5.045e-05 6.223e-05 0.00% Castro::finalize_advance() 10 4.275e-05 5.217e-05 5.514e-05 0.00% Amr::defBaseLevel() 1 2.671e-05 3.293e-05 4.157e-05 0.00% Castro::enforce_speed_limit() 62 2.374e-05 3.296e-05 3.974e-05 0.00% Castro::check_for_nan() 20 2.321e-05 2.718e-05 3.447e-05 0.00% FabArrayBase::CPC::define() 2 2.311e-05 2.69e-05 3.157e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.432e-05 1.809e-05 2.883e-05 0.00% Gravity::swapTimeLevels() 10 4.066e-06 1.545e-05 2.464e-05 0.00% Castro::create_source_corrector() 10 5.98e-06 1.237e-05 1.746e-05 0.00% Castro::post_timestep() 10 1.392e-05 1.461e-05 1.621e-05 0.00% Amr::initSubcycle() 1 8.622e-06 1.063e-05 1.492e-05 0.00% Castro::FluxRegCrseInit 10 5.231e-06 1.033e-05 1.229e-05 0.00% Castro::computeNewDt() 9 7.963e-06 1.059e-05 1.2e-05 0.00% Castro::post_init() 1 8.421e-06 9.855e-06 1.185e-05 0.00% Gravity::set_mass_offset() 10 5.785e-06 9.971e-06 1.168e-05 0.00% Amr::initialInit() 1 1.342e-06 2.384e-06 7.286e-06 0.00% Castro::retry_advance_ctu() 10 3.396e-06 6.253e-06 7.277e-06 0.00% Amr::InitializeInit() 1 2.262e-06 2.991e-06 6.279e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 4.066e-06 4.771e-06 5.582e-06 0.00% Castro::computeInitialDt() 2 3.258e-06 3.796e-06 4.587e-06 0.00% Castro::post_regrid() 1 1.714e-06 2.404e-06 3.25e-06 0.00% Amr::init() 1 1.822e-06 2.421e-06 3.035e-06 0.00% Castro::FluxRegFineAdd() 10 1.698e-06 2.413e-06 2.937e-06 0.00% DistributionMapping::Distribute() 1 8.85e-07 1.152e-06 1.439e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.73 3.732 3.733 100.00% Amr::coarseTimeStep() 10 3.486 3.486 3.486 93.39% Amr::timeStep() 10 3.473 3.476 3.477 93.14% Castro::advance() 10 3.458 3.459 3.459 92.67% Castro::subcycle_advance_ctu() 10 3.386 3.389 3.406 91.24% Castro::do_advance_ctu() 10 3.386 3.389 3.406 91.24% Castro::construct_ctu_hydro_source() 10 1.918 2.455 2.547 68.23% Gravity::make_radial_gravity() 21 0.3452 0.3601 0.3975 10.65% Castro::construct_old_gravity() 10 0.2059 0.2195 0.2469 6.61% Gravity::get_old_grav_vector() 10 0.2049 0.2186 0.2464 6.60% Gravity::get_new_grav_vector() 11 0.2343 0.2366 0.2381 6.38% FillPatchIterator::Initialize 41 0.1836 0.1952 0.2322 6.22% Amr::init() 1 0.2301 0.2303 0.2304 6.17% Amr::initialInit() 1 0.2155 0.2158 0.2161 5.79% Castro::construct_new_gravity() 10 0.2084 0.2101 0.2114 5.66% FillPatchSingleLevel 41 0.1308 0.1459 0.2106 5.64% Amr::InitializeInit() 1 0.05737 0.1089 0.1859 4.98% Amr::defBaseLevel() 1 0.05737 0.1089 0.1859 4.98% Castro::initialize_do_advance() 10 0.1669 0.1755 0.1818 4.87% FabArray::ParallelCopy() 41 0.08533 0.1012 0.1754 4.70% Castro::initData() 1 0.0437 0.09361 0.1673 4.48% Amr::FinalizeInit() 1 0.02952 0.107 0.1584 4.24% FabArray::ParallelCopy_finish() 41 0.03285 0.05059 0.152 4.07% Castro::estTimeStep() 21 0.02277 0.09918 0.1486 3.98% Castro::expand_state() 10 0.1175 0.126 0.131 3.51% Castro::computeInitialDt() 2 0.001915 0.07913 0.1306 3.50% Castro::clean_state() 62 0.1065 0.118 0.1237 3.31% Castro::computeTemp() 63 0.06375 0.07046 0.07358 1.97% Castro::initialize_advance() 10 0.05267 0.06966 0.07281 1.95% FabArray::setVal() 143 0.0517 0.0689 0.07229 1.94% Castro::do_new_sources() 10 0.04831 0.06531 0.06884 1.84% FabArray::ParallelCopy_nowait() 41 0.02332 0.05054 0.05558 1.49% Castro::reset_internal_energy(MultiFab) 63 0.04651 0.05112 0.05323 1.43% Castro::reset_internal_energy(Fab) 1008 0.0462 0.05079 0.05289 1.42% Castro::do_old_sources() 10 0.029 0.04773 0.05093 1.36% StateDataPhysBCFunct::() 41 0.03513 0.04464 0.04846 1.30% StateData::FillBoundary(geom) 41 0.03503 0.04449 0.04831 1.29% Castro::normalize_species() 62 0.03891 0.04199 0.04398 1.18% Castro::construct_new_source() 50 0.02215 0.03082 0.0325 0.87% Gravity::interpolate_monopole_grav() 21 0.02594 0.02772 0.02853 0.76% Castro::post_init() 1 0.02669 0.02716 0.02741 0.73% Castro::construct_new_gravity_source() 10 0.01788 0.02351 0.02484 0.67% Amr::writePlotFile() 2 0.02434 0.02452 0.02476 0.66% Castro::apply_source_to_state() 20 0.006804 0.01635 0.01817 0.49% MultiFab::Saxpy() 20 0.006766 0.01629 0.01811 0.49% Castro::post_timestep() 10 0.01454 0.01635 0.01734 0.46% VisMF::Write(FabArray) 2 0.01153 0.0122 0.01496 0.40% FabArray::setDomainBndry() 41 0.003895 0.0124 0.01394 0.37% Castro::check_for_nan() 20 0.009222 0.01217 0.01392 0.37% MultiFab::contains_nan() 20 0.009196 0.01214 0.01389 0.37% Castro::construct_old_source() 50 0.00404 0.01118 0.01249 0.33% Castro::construct_old_gravity_source() 10 0.003995 0.01109 0.0124 0.33% Castro::Castro() 1 0.008747 0.009897 0.0121 0.32% Castro::initMFs() 1 0.005389 0.006375 0.008459 0.23% Castro::computeNewDt() 9 0.007584 0.007591 0.007598 0.20% Castro::enforce_min_density() 62 0.00491 0.006344 0.007209 0.19% AmrLevel::AmrLevel(dm) 1 0.004498 0.005164 0.006566 0.18% StateData::define() 4 0.004481 0.005146 0.006547 0.18% Castro::swap_state_time_levels() 10 0.002887 0.003714 0.004259 0.11% Castro::buildMetrics() 1 0.001376 0.00162 0.002095 0.06% Castro::post_regrid() 1 0.001508 0.001631 0.001878 0.05% Castro::finalize_do_advance() 10 0.0005192 0.0009793 0.001117 0.03% Amr::InitAmr() 1 0.0002734 0.0003459 0.0004808 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.42e-05 0.000169 0.0002515 0.01% DistributionMapping::LeastUsedCPUs() 1 7.689e-06 0.0001631 0.0002451 0.01% Castro::enforce_consistent_e() 1 8.414e-05 9.638e-05 0.000132 0.00% FabArrayBase::getCPC() 41 7.863e-05 8.424e-05 9.376e-05 0.00% Amr::writeSmallPlotFile() 1 2.514e-05 5.574e-05 8.004e-05 0.00% Castro::finalize_advance() 10 4.968e-05 6.491e-05 7.011e-05 0.00% Castro::enforce_speed_limit() 62 2.374e-05 3.296e-05 3.974e-05 0.00% FabArrayBase::CPC::define() 2 2.311e-05 2.69e-05 3.157e-05 0.00% Gravity::swapTimeLevels() 10 4.066e-06 1.545e-05 2.464e-05 0.00% Castro::create_source_corrector() 10 5.98e-06 1.237e-05 1.746e-05 0.00% Amr::initSubcycle() 1 8.622e-06 1.063e-05 1.492e-05 0.00% Castro::FluxRegCrseInit 10 5.231e-06 1.033e-05 1.229e-05 0.00% Gravity::set_mass_offset() 10 5.785e-06 9.971e-06 1.168e-05 0.00% Castro::retry_advance_ctu() 10 3.396e-06 6.253e-06 7.277e-06 0.00% Castro::FluxRegFineAdd() 10 1.698e-06 2.413e-06 2.937e-06 0.00% DistributionMapping::Distribute() 1 8.85e-07 1.152e-06 1.439e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-44-g027f2ff77fed) finalized