MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (22.06-44-g027f2ff77fed) initialized Starting run at 05:38:50 UTC on 2022-06-28. Successfully read inputs file ... Castro git describe: 22.06-12-g556652b03 AMReX git describe: 22.06-44-g027f2ff77 Microphysics git describe: 22.06-6-g5146750a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014174179 seconds [Level 0 step 1] ADVANCE with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells [STEP 1] Coarse TimeStep time: 0.356742938 [STEP 1] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [Level 0 step 2] ADVANCE with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells [STEP 2] Coarse TimeStep time: 0.337985425 [STEP 2] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [Level 0 step 3] ADVANCE with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells [STEP 3] Coarse TimeStep time: 0.338144985 [STEP 3] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [Level 0 step 4] ADVANCE with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells [STEP 4] Coarse TimeStep time: 0.337276374 [STEP 4] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [Level 0 step 5] ADVANCE with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells [STEP 5] Coarse TimeStep time: 0.345447672 [STEP 5] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [Level 0 step 6] ADVANCE with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells [STEP 6] Coarse TimeStep time: 0.349005981 [STEP 6] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [Level 0 step 7] ADVANCE with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells [STEP 7] Coarse TimeStep time: 0.334151274 [STEP 7] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [Level 0 step 8] ADVANCE with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells [STEP 8] Coarse TimeStep time: 0.335201208 [STEP 8] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [Level 0 step 9] ADVANCE with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells [STEP 9] Coarse TimeStep time: 0.350817747 [STEP 9] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [Level 0 step 10] ADVANCE with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells [STEP 10] Coarse TimeStep time: 0.34010962 [STEP 10] FAB kilobyte spread across MPI nodes: [58394 ... 58394] STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.010011017 seconds Ending run at 05:38:54 UTC on 2022-06-28. Run time = 3.623099292 Run time without initialization = 3.442087073 Average number of zones advanced per microsecond: 0.762 Average number of zones advanced per microsecond per rank: 0.095 TinyProfiler total time across processes [min...avg...max]: 3.621 ... 3.623 ... 3.623 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0320 2.3537 2.4696 68.16% Castro::do_advance_ctu() 10 0.04319 0.1614 0.4875 13.45% Gravity::make_radial_gravity() 21 0.3507 0.3649 0.3897 10.76% Castro::estTimeStep() 21 0.02675 0.06629 0.1189 3.28% Castro::initData() 1 0.03881 0.08049 0.1172 3.23% FabArray::ParallelCopy_finish() 41 0.04437 0.06098 0.1087 3.00% FabArray::setVal() 143 0.06838 0.07231 0.07524 2.08% Castro::reset_internal_energy(Fab) 1008 0.04546 0.04995 0.05185 1.43% FabArray::ParallelCopy_nowait() 41 0.02915 0.04376 0.04969 1.37% StateData::FillBoundary(geom) 41 0.03521 0.04257 0.04742 1.31% Castro::normalize_species() 62 0.04032 0.04185 0.0435 1.20% FillPatchIterator::Initialize 41 0.01943 0.0321 0.03667 1.01% Gravity::interpolate_monopole_grav() 21 0.02573 0.02747 0.02856 0.79% Castro::construct_new_gravity_source() 10 0.01965 0.0232 0.0244 0.67% Castro::expand_state() 10 0.009602 0.01826 0.02182 0.60% Castro::computeTemp() 63 0.01652 0.01898 0.02066 0.57% Castro::initialize_do_advance() 10 0.008384 0.01672 0.01836 0.51% MultiFab::Saxpy() 20 0.01154 0.01546 0.01651 0.46% VisMF::Write(FabArray) 2 0.01117 0.01227 0.01633 0.45% Amr::writePlotFile() 2 0.008098 0.01192 0.01294 0.36% MultiFab::contains_nan() 20 0.01043 0.0117 0.01279 0.35% Gravity::get_new_grav_vector() 11 0.009176 0.01149 0.01272 0.35% FabArray::setDomainBndry() 41 0.005063 0.0105 0.01251 0.35% Castro::construct_old_gravity_source() 10 0.005699 0.01059 0.01212 0.33% Castro::initialize_advance() 10 0.01045 0.01071 0.01098 0.30% Gravity::get_old_grav_vector() 10 0.00733 0.009766 0.01085 0.30% Castro::construct_new_source() 50 0.005241 0.006832 0.00837 0.23% Castro::enforce_min_density() 62 0.005662 0.006079 0.006581 0.18% Castro::initMFs() 1 0.005555 0.005946 0.006522 0.18% Amr::coarseTimeStep() 10 0.00379 0.00528 0.006159 0.17% main() 1 0.00334 0.005351 0.005901 0.16% StateData::define() 4 0.00452 0.004803 0.005199 0.14% Castro::swap_state_time_levels() 10 0.003042 0.004003 0.004446 0.12% Castro::buildMetrics() 1 0.001294 0.00138 0.001475 0.04% Castro::finalize_do_advance() 10 0.0006598 0.001197 0.001381 0.04% Amr::timeStep() 10 0.000175 0.0002249 0.0004535 0.01% Amr::InitAmr() 1 0.0002649 0.0002874 0.0003689 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002804 0.000319 0.0003464 0.01% Castro::construct_old_source() 50 3.286e-05 0.0001073 0.0003343 0.01% Castro::clean_state() 62 0.0001352 0.0001591 0.0001732 0.00% StateDataPhysBCFunct::() 41 9.913e-05 0.0001248 0.000149 0.00% FabArray::ParallelCopy() 41 5.835e-05 8.68e-05 0.000107 0.00% DistributionMapping::LeastUsedCPUs() 1 7.795e-06 8.178e-05 0.0001002 0.00% Castro::enforce_consistent_e() 1 7.705e-05 8.76e-05 9.956e-05 0.00% Castro::do_new_sources() 10 3.957e-05 7.295e-05 9.422e-05 0.00% Castro::Castro() 1 5.587e-05 6.741e-05 8.738e-05 0.00% Castro::do_old_sources() 10 3.782e-05 7.032e-05 8.438e-05 0.00% Amr::FinalizeInit() 1 4.311e-06 1.447e-05 7.949e-05 0.00% FillPatchSingleLevel 41 5.653e-05 7.126e-05 7.856e-05 0.00% Amr::writeSmallPlotFile() 1 2.387e-05 5.41e-05 6.845e-05 0.00% Castro::finalize_advance() 10 5.259e-05 5.814e-05 6.626e-05 0.00% Castro::apply_source_to_state() 20 3.134e-05 4.928e-05 6.26e-05 0.00% Castro::construct_old_gravity() 10 2.893e-05 5.04e-05 6.119e-05 0.00% Castro::subcycle_advance_ctu() 10 3.638e-05 4.851e-05 5.827e-05 0.00% FabArrayBase::getCPC() 41 3.836e-05 5.113e-05 5.721e-05 0.00% Castro::construct_new_gravity() 10 3.202e-05 4.502e-05 5.538e-05 0.00% Castro::advance() 10 2.917e-05 4.208e-05 5.209e-05 0.00% Amr::defBaseLevel() 1 2.676e-05 3.404e-05 4.569e-05 0.00% Castro::enforce_speed_limit() 62 2.297e-05 3.139e-05 3.473e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.641e-05 2.465e-05 3.449e-05 0.00% FabArrayBase::CPC::define() 2 2.32e-05 2.771e-05 3.289e-05 0.00% Castro::post_timestep() 10 1.204e-05 1.624e-05 2.76e-05 0.00% Castro::computeNewDt() 9 7.925e-06 1.308e-05 2.589e-05 0.00% Castro::check_for_nan() 20 1.747e-05 2.175e-05 2.47e-05 0.00% Castro::FluxRegCrseInit 10 7.485e-06 1.356e-05 2.145e-05 0.00% Gravity::set_mass_offset() 10 6.03e-06 1.065e-05 1.716e-05 0.00% Castro::create_source_corrector() 10 7.024e-06 1.154e-05 1.578e-05 0.00% Gravity::swapTimeLevels() 10 7.697e-06 1.246e-05 1.537e-05 0.00% Castro::post_init() 1 7.979e-06 1.07e-05 1.292e-05 0.00% Castro::retry_advance_ctu() 10 4.274e-06 6.567e-06 1.121e-05 0.00% Amr::initSubcycle() 1 8.525e-06 9.482e-06 1.007e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.675e-06 4.769e-06 7.076e-06 0.00% Amr::InitializeInit() 1 2.108e-06 3.14e-06 5.917e-06 0.00% Castro::computeInitialDt() 2 3.639e-06 4.223e-06 4.772e-06 0.00% Castro::post_regrid() 1 1.821e-06 2.976e-06 4.716e-06 0.00% Castro::FluxRegFineAdd() 10 2.193e-06 2.504e-06 2.669e-06 0.00% Amr::initialInit() 1 1.317e-06 1.671e-06 2.481e-06 0.00% Amr::init() 1 1.838e-06 2.091e-06 2.324e-06 0.00% DistributionMapping::Distribute() 1 8.31e-07 9.95e-07 1.281e-06 0.00% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.621 3.623 3.623 100.00% Amr::coarseTimeStep() 10 3.426 3.426 3.426 94.57% Amr::timeStep() 10 3.411 3.412 3.414 94.22% Castro::advance() 10 3.395 3.395 3.396 93.72% Castro::subcycle_advance_ctu() 10 3.32 3.322 3.329 91.87% Castro::do_advance_ctu() 10 3.32 3.322 3.329 91.87% Castro::construct_ctu_hydro_source() 10 2.032 2.354 2.47 68.16% Gravity::make_radial_gravity() 21 0.3507 0.3649 0.3897 10.76% Gravity::get_new_grav_vector() 11 0.2392 0.2403 0.2414 6.66% Castro::construct_old_gravity() 10 0.2032 0.2154 0.2348 6.48% Gravity::get_old_grav_vector() 10 0.2023 0.2144 0.2332 6.44% Castro::construct_new_gravity() 10 0.2123 0.2134 0.2143 5.91% FillPatchIterator::Initialize 41 0.1833 0.1903 0.1999 5.52% Castro::initialize_do_advance() 10 0.1551 0.1721 0.1809 4.99% Amr::init() 1 0.1805 0.1806 0.1806 4.98% FillPatchSingleLevel 41 0.1354 0.1477 0.1754 4.84% Amr::initialInit() 1 0.1662 0.1665 0.1667 4.60% FabArray::ParallelCopy() 41 0.09176 0.1049 0.138 3.81% Amr::InitializeInit() 1 0.05693 0.09936 0.1367 3.77% Amr::defBaseLevel() 1 0.05693 0.09936 0.1367 3.77% Castro::expand_state() 10 0.1181 0.1252 0.1318 3.64% Castro::clean_state() 62 0.1075 0.1164 0.1219 3.37% Castro::initData() 1 0.04294 0.0845 0.1207 3.33% Castro::estTimeStep() 21 0.02675 0.06629 0.1189 3.28% Amr::FinalizeInit() 1 0.03004 0.06711 0.1098 3.03% FabArray::ParallelCopy_finish() 41 0.04437 0.06098 0.1087 3.00% Castro::computeInitialDt() 2 0.001679 0.03897 0.08143 2.25% Castro::initialize_advance() 10 0.06672 0.07294 0.07565 2.09% FabArray::setVal() 143 0.06838 0.07231 0.07524 2.08% Castro::computeTemp() 63 0.06226 0.06924 0.0728 2.01% Castro::do_new_sources() 10 0.05661 0.06471 0.06722 1.86% Castro::reset_internal_energy(MultiFab) 63 0.04574 0.05027 0.05217 1.44% Castro::reset_internal_energy(Fab) 1008 0.04546 0.04995 0.05185 1.43% Castro::do_old_sources() 10 0.04005 0.04754 0.05054 1.39% FabArray::ParallelCopy_nowait() 41 0.02923 0.04384 0.04977 1.37% StateDataPhysBCFunct::() 41 0.03531 0.0427 0.04755 1.31% StateData::FillBoundary(geom) 41 0.03521 0.04257 0.04742 1.31% Castro::normalize_species() 62 0.04032 0.04185 0.0435 1.20% Castro::construct_new_source() 50 0.02504 0.03003 0.03245 0.90% Gravity::interpolate_monopole_grav() 21 0.02573 0.02747 0.02856 0.79% Castro::post_init() 1 0.02726 0.02753 0.02785 0.77% Amr::writePlotFile() 2 0.02396 0.02419 0.02445 0.67% Castro::construct_new_gravity_source() 10 0.01965 0.0232 0.0244 0.67% Castro::post_timestep() 10 0.01529 0.01644 0.01846 0.51% Castro::apply_source_to_state() 20 0.01157 0.01551 0.01656 0.46% MultiFab::Saxpy() 20 0.01154 0.01546 0.01651 0.46% VisMF::Write(FabArray) 2 0.01117 0.01227 0.01633 0.45% Castro::check_for_nan() 20 0.01045 0.01172 0.01282 0.35% MultiFab::contains_nan() 20 0.01043 0.0117 0.01279 0.35% FabArray::setDomainBndry() 41 0.005063 0.0105 0.01251 0.35% Castro::construct_old_source() 50 0.005732 0.0107 0.01221 0.34% Castro::construct_old_gravity_source() 10 0.005699 0.01059 0.01212 0.33% Castro::Castro() 1 0.009289 0.009916 0.01057 0.29% Castro::computeNewDt() 9 0.007772 0.007878 0.007915 0.22% Castro::enforce_min_density() 62 0.005662 0.006079 0.006581 0.18% Castro::initMFs() 1 0.005555 0.005946 0.006522 0.18% AmrLevel::AmrLevel(dm) 1 0.004548 0.004828 0.005216 0.14% StateData::define() 4 0.00452 0.004803 0.005199 0.14% Castro::swap_state_time_levels() 10 0.003042 0.004003 0.004446 0.12% Castro::post_regrid() 1 0.001504 0.0016 0.001953 0.05% Castro::buildMetrics() 1 0.00141 0.001511 0.001624 0.04% Castro::finalize_do_advance() 10 0.0006598 0.001197 0.001381 0.04% Amr::InitAmr() 1 0.0002742 0.0002969 0.0003775 0.01% DistributionMapping::SFCProcessorMapDoIt() 1 1.23e-05 8.754e-05 0.0001074 0.00% DistributionMapping::LeastUsedCPUs() 1 7.795e-06 8.178e-05 0.0001002 0.00% Castro::enforce_consistent_e() 1 7.705e-05 8.76e-05 9.956e-05 0.00% FabArrayBase::getCPC() 41 6.985e-05 7.884e-05 9.001e-05 0.00% Castro::finalize_advance() 10 6.418e-05 7.42e-05 8.999e-05 0.00% Amr::writeSmallPlotFile() 1 2.387e-05 5.41e-05 6.845e-05 0.00% Castro::enforce_speed_limit() 62 2.297e-05 3.139e-05 3.473e-05 0.00% FabArrayBase::CPC::define() 2 2.32e-05 2.771e-05 3.289e-05 0.00% Castro::FluxRegCrseInit 10 7.485e-06 1.356e-05 2.145e-05 0.00% Gravity::set_mass_offset() 10 6.03e-06 1.065e-05 1.716e-05 0.00% Castro::create_source_corrector() 10 7.024e-06 1.154e-05 1.578e-05 0.00% Gravity::swapTimeLevels() 10 7.697e-06 1.246e-05 1.537e-05 0.00% Castro::retry_advance_ctu() 10 4.274e-06 6.567e-06 1.121e-05 0.00% Amr::initSubcycle() 1 8.525e-06 9.482e-06 1.007e-05 0.00% Castro::FluxRegFineAdd() 10 2.193e-06 2.504e-06 2.669e-06 0.00% DistributionMapping::Distribute() 1 8.31e-07 9.95e-07 1.281e-06 0.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] AMReX (22.06-44-g027f2ff77fed) finalized